RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 RANP62826 216 aaKnown RBP13.34□□□□□ -0.27
SSR4-201ENST00000320857 FOXL1Q12952 345 aa13.34□□□□□ -0.27
SSR4-201ENST00000320857 ECSCRQ19T08 205 aa13.34□□□□□ -0.27
SSR4-201ENST00000320857 BRD3OSQ6XYD6 125 aa13.34□□□□□ -0.27
SSR4-201ENST00000320857 ZNF491Q8N8L2 437 aa13.34□□□□□ -0.27
SSR4-201ENST00000320857 TMEM190Q8WZ59 177 aa13.34□□□□□ -0.27
SSR4-201ENST00000320857 SHANK2-AS3Q9BTD1 123 aa13.34□□□□□ -0.27
SSR4-201ENST00000320857 CDC42EP3Q9UKI2 254 aa13.34□□□□□ -0.27
SSR4-201ENST00000320857 S4R3C0 116 aa13.34□□□□□ -0.27
SSR4-201ENST00000320857 A0A0U1RQK1 487 aa13.33□□□□□ -0.28
SSR4-201ENST00000320857 H3BRN7 92 aa13.33□□□□□ -0.28
SSR4-201ENST00000320857 IL4P05112 153 aa13.33□□□□□ -0.28
SSR4-201ENST00000320857 IGHV4-38-2P0DP08 117 aa13.33□□□□□ -0.28
SSR4-201ENST00000320857 HIST1H1EP10412 219 aaKnown RBP13.33□□□□□ -0.28
SSR4-201ENST00000320857 FCGR2BP31994 310 aaPredicted RBP13.33□□□□□ -0.28
SSR4-201ENST00000320857 LEMD1Q68G75 181 aa13.33□□□□□ -0.28
SSR4-201ENST00000320857 ZNF600Q6ZNG1 722 aa13.33□□□□□ -0.28
SSR4-201ENST00000320857 IGF2BP2-AS1Q96M15 143 aa13.33□□□□□ -0.28
SSR4-201ENST00000320857 HIF1ANQ9NWT6 349 aa13.33□□□□□ -0.28
SSR4-201ENST00000320857 RNF24Q9Y225 148 aa13.33□□□□□ -0.28
SSR4-201ENST00000320857 PGPA6NDG6 321 aa13.32□□□□□ -0.28
SSR4-201ENST00000320857 UBE2CO00762 179 aa13.32□□□□□ -0.28
SSR4-201ENST00000320857 TYMSP04818 313 aa13.32□□□□□ -0.28
SSR4-201ENST00000320857 SLC25A5P05141 298 aaKnown RBP13.32□□□□□ -0.28
SSR4-201ENST00000320857 BEX4Q9NWD9 120 aaPredicted RBP13.32□□□□□ -0.28
SSR4-201ENST00000320857 EPDR1Q9UM22 224 aa13.32□□□□□ -0.28
SSR4-201ENST00000320857 F8W735 103 aaPredicted RBP13.31□□□□□ -0.28
SSR4-201ENST00000320857 GCGP01275 180 aa13.31□□□□□ -0.28
SSR4-201ENST00000320857 AKR1D1P51857 326 aa13.31□□□□□ -0.28
SSR4-201ENST00000320857 FAM3BP58499 235 aaPredicted RBP13.31□□□□□ -0.28
SSR4-201ENST00000320857 ERVFC1-1P60608 527 aa13.31□□□□□ -0.28
SSR4-201ENST00000320857 PIFOQ8TCI5 191 aa13.31□□□□□ -0.28
SSR4-201ENST00000320857 ASH1LQ9NR48 2969 aaKnown RBP13.31□□□□□ -0.28
SSR4-201ENST00000320857 A0A096LNT2 108 aa13.31□□□□□ -0.28
SSR4-201ENST00000320857 TMEM219Q86XT9 240 aa13.31□□□□□ -0.28
SSR4-201ENST00000320857 BPIFA4PQ86YQ2 179 aa13.31□□□□□ -0.28
SSR4-201ENST00000320857 LINC01356Q8N9X3 169 aa13.31□□□□□ -0.28
SSR4-201ENST00000320857 C5orf17Q8NAS9 161 aa13.31□□□□□ -0.28
SSR4-201ENST00000320857 OTORQ9NRC9 128 aa13.31□□□□□ -0.28
SSR4-201ENST00000320857 OSTCQ9NRP0 149 aa13.31□□□□□ -0.28
SSR4-201ENST00000320857 IL36BQ9NZH7 164 aa13.31□□□□□ -0.28
SSR4-201ENST00000320857 TRAV9-1A0A075B6T8 112 aa13.3□□□□□ -0.28
SSR4-201ENST00000320857 S100A9P06702 114 aaKnown RBP13.3□□□□□ -0.28
SSR4-201ENST00000320857 SNRPCP09234 159 aaKnown RBP13.3□□□□□ -0.28
SSR4-201ENST00000320857 FABP9Q0Z7S8 132 aa13.3□□□□□ -0.28
SSR4-201ENST00000320857 OR5I1Q13606 314 aa13.3□□□□□ -0.28
SSR4-201ENST00000320857 LRRC75A-AS1Q8N1F1 130 aa13.3□□□□□ -0.28
SSR4-201ENST00000320857 OR4F17Q8NGA8 305 aa13.3□□□□□ -0.28
SSR4-201ENST00000320857 Q9H3A6 140 aa13.3□□□□□ -0.28
SSR4-201ENST00000320857 GAR1Q9NY12 217 aaKnown RBP13.3□□□□□ -0.28
SSR4-201ENST00000320857 ABCA12Q86UK0 2595 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 HIST1H2BKO60814 126 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 IGHV3-23P01764 117 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 HIST1H2BJP06899 126 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 HIST1H2BOP23527 126 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 S100A7P31151 101 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 HIST1H2BBP33778 126 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 HIST1H2BDP58876 126 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 UBE2G1P62253 170 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 HIST1H2BCP62807 126 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 RHOGP84095 191 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 HIST2H2BEQ16778 126 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 TMEM183BQ1AE95 376 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.29□□□□□ -0.28
SSR4-201ENST00000320857 BAGE2Q86Y30 109 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 HIST1H2BHQ93079 126 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 HIST1H2BNQ99877 126 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 HIST1H2BMQ99879 126 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 ZNF586Q9NXT0 402 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 APCP25054 2843 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 UNC79Q9P2D8 2635 aa13.29□□□□□ -0.28
SSR4-201ENST00000320857 TRBV9A0A0B4J1U6 114 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 OR2T8A6NH00 312 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 SH2D7A6NKC9 451 aaPredicted RBP13.28□□□□□ -0.28
SSR4-201ENST00000320857 ISLRO14498 428 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 IGLV2-8P01709 118 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 MGST1P10620 155 aaKnown RBP13.28□□□□□ -0.28
SSR4-201ENST00000320857 GNG5P63218 68 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 DEFB113Q30KQ7 82 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 ZNF502Q8TBZ5 544 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 FRZBQ92765 325 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 ATG101Q9BSB4 218 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 ZNF320A2RRD8 509 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 ZNF98A6NK75 572 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 PHOX2AO14813 284 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 CTSGP08311 255 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 TRGC1P0CF51 173 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 CRIP2P52943 208 aaPredicted RBP13.28□□□□□ -0.28
SSR4-201ENST00000320857 NDUFA6P56556 154 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 USF2Q15853 346 aaPredicted RBP13.28□□□□□ -0.28
SSR4-201ENST00000320857 RPEL1Q2QD12 228 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 C15orf32Q32M92 178 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 LINC00479Q96M42 142 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 KLF12Q9Y4X4 402 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 V9GYV3 84 aa13.28□□□□□ -0.28
SSR4-201ENST00000320857 A6NDX4 124 aa13.27□□□□□ -0.29
SSR4-201ENST00000320857 LINC01548A6NM66 108 aa13.27□□□□□ -0.29
SSR4-201ENST00000320857 G3V318 75 aa13.27□□□□□ -0.29
SSR4-201ENST00000320857 J3QLI3 93 aa13.27□□□□□ -0.29
SSR4-201ENST00000320857 M0QZK8 103 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms