RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 PSMB2P49721 201 aa13.46□□□□□ -0.25
CLIP4-201ENST00000320081 IGHV2-26A0A0B4J1V2 119 aa13.46□□□□□ -0.25
CLIP4-201ENST00000320081 NBR2O15453 112 aa13.46□□□□□ -0.25
CLIP4-201ENST00000320081 JOSD1Q15040 202 aaPredicted RBP13.46□□□□□ -0.25
CLIP4-201ENST00000320081 ZFP30Q9Y2G7 519 aa13.46□□□□□ -0.25
CLIP4-201ENST00000320081 LOC107984156A0A0G2JMH3 177 aa13.46□□□□□ -0.26
CLIP4-201ENST00000320081 TMEM178BH3BS89 294 aa13.46□□□□□ -0.26
CLIP4-201ENST00000320081 FAM71F2Q6NXP2 309 aa13.46□□□□□ -0.26
CLIP4-201ENST00000320081 ARL17AQ8IVW1 177 aa13.46□□□□□ -0.26
CLIP4-201ENST00000320081 NUDT10Q8NFP7 164 aa13.46□□□□□ -0.26
CLIP4-201ENST00000320081 NUDT11Q96G61 164 aa13.46□□□□□ -0.26
CLIP4-201ENST00000320081 PRELID3AQ96N28 172 aa13.46□□□□□ -0.26
CLIP4-201ENST00000320081 C7orf69Q9H7B7 122 aa13.46□□□□□ -0.26
CLIP4-201ENST00000320081 TRIOO75962 3097 aa13.46□□□□□ -0.26
CLIP4-201ENST00000320081 NCR2O95944 276 aa13.45□□□□□ -0.26
CLIP4-201ENST00000320081 IGHV1-8P0DP01 117 aa13.45□□□□□ -0.26
CLIP4-201ENST00000320081 EVI2AP22794 236 aa13.45□□□□□ -0.26
CLIP4-201ENST00000320081 DYNLRB2Q8TF09 96 aa13.45□□□□□ -0.26
CLIP4-201ENST00000320081 ARHGAP32A7KAX9 2087 aa13.45□□□□□ -0.26
CLIP4-201ENST00000320081 PRSS2P07478 247 aa13.45□□□□□ -0.26
CLIP4-201ENST00000320081 IGKV2-40A0A087WW87 121 aaPredicted RBP13.45□□□□□ -0.26
CLIP4-201ENST00000320081 IGKV2D-40P01614 121 aaPredicted RBP13.45□□□□□ -0.26
CLIP4-201ENST00000320081 OR1N2Q8NGR9 330 aa13.45□□□□□ -0.26
CLIP4-201ENST00000320081 RNASEH2CQ8TDP1 164 aaKnown RBP13.45□□□□□ -0.26
CLIP4-201ENST00000320081 ATP5G2Q06055 141 aa13.44□□□□□ -0.26
CLIP4-201ENST00000320081 PRDM13Q9H4Q3 707 aa13.44□□□□□ -0.26
CLIP4-201ENST00000320081 TRAV1-1A0A0B4J248 108 aa13.44□□□□□ -0.26
CLIP4-201ENST00000320081 IGKV3OR2-268A0A0C4DH90 116 aa13.44□□□□□ -0.26
CLIP4-201ENST00000320081 IL15RAQ13261 267 aa13.44□□□□□ -0.26
CLIP4-201ENST00000320081 NDPQ00604 133 aa13.44□□□□□ -0.26
CLIP4-201ENST00000320081 MAP1LC3AQ9H492 121 aa13.44□□□□□ -0.26
CLIP4-201ENST00000320081 TPSG1Q9NRR2 321 aa13.44□□□□□ -0.26
CLIP4-201ENST00000320081 TNFSF13O75888 250 aa13.44□□□□□ -0.26
CLIP4-201ENST00000320081 RHOGP84095 191 aa13.44□□□□□ -0.26
CLIP4-201ENST00000320081 NDUFAF3Q9BU61 184 aa13.44□□□□□ -0.26
CLIP4-201ENST00000320081 BPTFQ12830 3046 aa13.44□□□□□ -0.26
CLIP4-201ENST00000320081 ADAMTS9Q9P2N4 1935 aa13.43□□□□□ -0.26
CLIP4-201ENST00000320081 GAGE10A6NGK3 116 aa13.43□□□□□ -0.26
CLIP4-201ENST00000320081 SMAD7O15105 426 aaKnown RBP13.43□□□□□ -0.26
CLIP4-201ENST00000320081 ANAPC10Q9UM13 185 aa13.43□□□□□ -0.26
CLIP4-201ENST00000320081 A0A1W2PRE2 83 aa13.43□□□□□ -0.26
CLIP4-201ENST00000320081 DLX6P56179 175 aa13.43□□□□□ -0.26
CLIP4-201ENST00000320081 H0YJW9 148 aa13.43□□□□□ -0.26
CLIP4-201ENST00000320081 LBHQ53QV2 105 aaPredicted RBP13.43□□□□□ -0.26
CLIP4-201ENST00000320081 LYPD6Q86Y78 171 aa13.43□□□□□ -0.26
CLIP4-201ENST00000320081 ZNF462Q96JM2 2506 aa13.42□□□□□ -0.26
CLIP4-201ENST00000320081 IZUMO1RA6ND01 250 aa13.42□□□□□ -0.26
CLIP4-201ENST00000320081 IGHV2-5P01817 119 aa13.42□□□□□ -0.26
CLIP4-201ENST00000320081 IGHG3P01860 377 aa13.42□□□□□ -0.26
CLIP4-201ENST00000320081 COTL1Q14019 142 aa13.42□□□□□ -0.26
CLIP4-201ENST00000320081 PRSS8Q16651 343 aa13.42□□□□□ -0.26
CLIP4-201ENST00000320081 A0A1W2PNU3 283 aaPredicted RBP13.42□□□□□ -0.26
CLIP4-201ENST00000320081 J3QR89 54 aa13.42□□□□□ -0.26
CLIP4-201ENST00000320081 ZNF324O75467 553 aaPredicted RBP13.42□□□□□ -0.26
CLIP4-201ENST00000320081 TGFAP01135 160 aa13.42□□□□□ -0.26
CLIP4-201ENST00000320081 C10orf91Q5T1B1 145 aa13.42□□□□□ -0.26
CLIP4-201ENST00000320081 Q6ZS92 163 aa13.42□□□□□ -0.26
CLIP4-201ENST00000320081 TRAV40A0A0B4J280 105 aa13.42□□□□□ -0.26
CLIP4-201ENST00000320081 MBD3L4A6NDZ8 208 aaPredicted RBP13.42□□□□□ -0.26
CLIP4-201ENST00000320081 MBD3L3A6NE82 208 aaPredicted RBP13.42□□□□□ -0.26
CLIP4-201ENST00000320081 MBD3L5A6NJ08 208 aaPredicted RBP13.42□□□□□ -0.26
CLIP4-201ENST00000320081 MBD3L2Q8NHZ7 208 aaPredicted RBP13.42□□□□□ -0.26
CLIP4-201ENST00000320081 TRBV6-6A0A0A6YYG2 114 aa13.42□□□□□ -0.26
CLIP4-201ENST00000320081 IGLV3-1P01715 115 aa13.42□□□□□ -0.26
CLIP4-201ENST00000320081 PSG8Q9UQ74 426 aa13.42□□□□□ -0.26
CLIP4-201ENST00000320081 IGHV1-3A0A0C4DH29 117 aa13.41□□□□□ -0.26
CLIP4-201ENST00000320081 ZNF664Q8N3J9 261 aa13.41□□□□□ -0.26
CLIP4-201ENST00000320081 ZNF414Q96IQ9 312 aa13.41□□□□□ -0.26
CLIP4-201ENST00000320081 TRAV30A0A087WSZ9 112 aa13.41□□□□□ -0.26
CLIP4-201ENST00000320081 E7EQL1 145 aa13.41□□□□□ -0.26
CLIP4-201ENST00000320081 A0A1W2PPI3 338 aa13.4□□□□□ -0.26
CLIP4-201ENST00000320081 A6NDN8 102 aa13.4□□□□□ -0.26
CLIP4-201ENST00000320081 SRSF7Q16629 238 aaKnown RBP eCLIP13.4□□□□□ -0.26
CLIP4-201ENST00000320081 PARD6GQ9BYG4 376 aaPredicted RBP13.4□□□□□ -0.26
CLIP4-201ENST00000320081 CDC42EP3Q9UKI2 254 aa13.4□□□□□ -0.26
CLIP4-201ENST00000320081 DENND4AQ7Z401 1863 aa13.4□□□□□ -0.26
CLIP4-201ENST00000320081 SRRM4A7MD48 611 aaKnown RBP13.4□□□□□ -0.26
CLIP4-201ENST00000320081 RNASE2P10153 161 aaKnown RBP13.4□□□□□ -0.26
CLIP4-201ENST00000320081 ZNF329Q86UD4 541 aa13.4□□□□□ -0.26
CLIP4-201ENST00000320081 JKAMPQ9P055 326 aa13.4□□□□□ -0.26
CLIP4-201ENST00000320081 TRBV9A0A0B4J1U6 114 aa13.4□□□□□ -0.26
CLIP4-201ENST00000320081 DKK1O94907 266 aa13.4□□□□□ -0.26
CLIP4-201ENST00000320081 Q6ZS49 121 aa13.4□□□□□ -0.26
CLIP4-201ENST00000320081 MAPK1IP1LQ8NDC0 245 aa13.4□□□□□ -0.26
CLIP4-201ENST00000320081 OSTCQ9NRP0 149 aa13.4□□□□□ -0.26
CLIP4-201ENST00000320081 ERVK11-1P61568 191 aa13.39□□□□□ -0.27
CLIP4-201ENST00000320081 DNLZQ5SXM8 178 aa13.39□□□□□ -0.27
CLIP4-201ENST00000320081 EBLN2Q6P2I7 272 aa13.39□□□□□ -0.27
CLIP4-201ENST00000320081 HIST1H4GQ99525 98 aa13.39□□□□□ -0.27
CLIP4-201ENST00000320081 FOXL1Q12952 345 aa13.39□□□□□ -0.27
CLIP4-201ENST00000320081 ZNF56Q15929 161 aa13.39□□□□□ -0.27
CLIP4-201ENST00000320081 CRXO43186 299 aaPredicted RBP13.39□□□□□ -0.27
CLIP4-201ENST00000320081 C15orf32Q32M92 178 aa13.39□□□□□ -0.27
CLIP4-201ENST00000320081 UNQ6494/PRO21346Q6UXR6 183 aa13.39□□□□□ -0.27
CLIP4-201ENST00000320081 NIT1Q86X76 327 aa13.39□□□□□ -0.27
CLIP4-201ENST00000320081 FER1L6-AS1Q8NA97 138 aa13.39□□□□□ -0.27
CLIP4-201ENST00000320081 CCL19Q99731 98 aa13.39□□□□□ -0.27
CLIP4-201ENST00000320081 A0A1W2PRX2 142 aa13.39□□□□□ -0.27
CLIP4-201ENST00000320081 PSMB11A5LHX3 300 aa13.39□□□□□ -0.27
CLIP4-201ENST00000320081 EREGO14944 169 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms