RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 TMEM144Q7Z5S9 345 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 PIP4P1Q86T03 277 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 FER1L6-AS1Q8NA97 138 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 ST20Q9HBF5 79 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 HIGD1AQ9Y241 93 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 MRPS16Q9Y3D3 137 aaKnown RBP6.17□□□□□ -1.42
CDHR3-201ENST00000317716 MALRD1Q5VYJ5 2156 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 TANC2Q9HCD6 1990 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 TRAV9-1A0A075B6T8 112 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 A0A1B0GUT8 65 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 A0A1B0GV72 72 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 TMEM238C9JI98 176 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 IGHV3-23P01764 117 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 SAA1P0DJI8 122 aaPredicted RBP6.17□□□□□ -1.42
CDHR3-201ENST00000317716 MRPL14Q6P1L8 145 aaKnown RBP6.17□□□□□ -1.42
CDHR3-201ENST00000317716 Q8NFD4 153 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 PRELID3AQ96N28 172 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 COL4A2P08572 1712 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 IGLV3-12A0A075B6K2 115 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 IGLV3-32A0A0A0MS00 114 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 TMEM189A5PLL7 270 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 PSMB2P49721 201 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 WDR82Q6UXN9 313 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 GPR82Q96P67 336 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 FOXC2Q99958 501 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 NDFIP1Q9BT67 221 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 MRPL20Q9BYC9 149 aaKnown RBP6.17□□□□□ -1.42
CDHR3-201ENST00000317716 TP53TG3Q9ULZ0 132 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 LOC105371242A0A075B767 164 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 IGHV2-26A0A0B4J1V2 119 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 PPIAL4CA0A0B4J2A2 164 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 C15orf61A6NNL5 157 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 NDUFB3O43676 98 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 APOMO95445 188 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 IGLV3-1P01715 115 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 IGKV1-16P04430 117 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 PPIAL4GP0DN37 164 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 AREGP15514 252 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 RBX1P62877 108 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 MEF2CQ06413 473 aaPredicted RBP6.16□□□□□ -1.42
CDHR3-201ENST00000317716 SFXN3Q9BWM7 321 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 Q9H3A6 140 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 C11orf1Q9H5F2 150 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 ZNF257Q9Y2Q1 563 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 HIVEP3Q5T1R4 2406 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 TRGV8A0A0C4DH27 118 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 AHRRA9YTQ3 701 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 C9JCJ5 164 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 ZNF146Q15072 292 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 LRRC10Q5BKY1 277 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 BVES-AS1Q5T3Y7 98 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 RBPMS2Q6ZRY4 209 aaKnown RBP6.16□□□□□ -1.42
CDHR3-201ENST00000317716 WDR86Q86TI4 376 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 SRSF8Q9BRL6 282 aaKnown RBP6.16□□□□□ -1.42
CDHR3-201ENST00000317716 RNF7Q9UBF6 113 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 JPT1Q9UK76 154 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 EPDR1Q9UM22 224 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 IGHV2-70DA0A0C4DH43 119 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 IGLC7A0M8Q6 106 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 K7ERJ3 54 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 ETV2O00321 342 aaPredicted RBP6.16□□□□□ -1.42
CDHR3-201ENST00000317716 CECR9P0C854 216 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 RPL27AP46776 148 aaKnown RBP6.16□□□□□ -1.42
CDHR3-201ENST00000317716 PSG3Q16557 428 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 SAMD5Q5TGI4 173 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 GTSCR1Q86UQ5 136 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 RPEQ96AT9 228 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 BEX4Q9NWD9 120 aaPredicted RBP6.16□□□□□ -1.42
CDHR3-201ENST00000317716 POLQO75417 2590 aa6.16□□□□□ -1.42
CDHR3-201ENST00000317716 EML6Q6ZMW3 1958 aa6.15□□□□□ -1.42
CDHR3-201ENST00000317716 IGHV3-66A0A0C4DH42 116 aa6.15□□□□□ -1.42
CDHR3-201ENST00000317716 KIR2DL2P43627 348 aaPredicted RBP6.15□□□□□ -1.42
CDHR3-201ENST00000317716 BCL6BQ8N143 479 aaPredicted RBP6.15□□□□□ -1.42
CDHR3-201ENST00000317716 SIGMAR1Q99720 223 aa6.15□□□□□ -1.42
CDHR3-201ENST00000317716 SLC25A33Q9BSK2 321 aa6.15□□□□□ -1.42
CDHR3-201ENST00000317716 CHD6Q8TD26 2715 aa6.15□□□□□ -1.42
CDHR3-201ENST00000317716 TLN2Q9Y4G6 2542 aa6.15□□□□□ -1.42
CDHR3-201ENST00000317716 K7EP13 123 aa6.15□□□□□ -1.42
CDHR3-201ENST00000317716 NDUFA3O95167 84 aa6.15□□□□□ -1.42
CDHR3-201ENST00000317716 MGPP08493 103 aa6.15□□□□□ -1.42
CDHR3-201ENST00000317716 DLX1P56177 255 aa6.15□□□□□ -1.42
CDHR3-201ENST00000317716 ETDBQ3ZM63 59 aa6.15□□□□□ -1.42
CDHR3-201ENST00000317716 STXBP6Q8NFX7 210 aa6.15□□□□□ -1.42
CDHR3-201ENST00000317716 SARAFQ96BY9 339 aa6.15□□□□□ -1.42
CDHR3-201ENST00000317716 C5orf30Q96GV9 206 aa6.15□□□□□ -1.42
CDHR3-201ENST00000317716 ONECUT1Q9UBC0 465 aa6.15□□□□□ -1.42
CDHR3-201ENST00000317716 SLC25A10Q9UBX3 287 aaPredicted RBP6.15□□□□□ -1.42
CDHR3-201ENST00000317716 NAV3Q8IVL0 2385 aa6.15□□□□□ -1.43
CDHR3-201ENST00000317716 IGHV1-24A0A0C4DH33 117 aa6.15□□□□□ -1.43
CDHR3-201ENST00000317716 Q0VFX4 171 aa6.15□□□□□ -1.43
CDHR3-201ENST00000317716 AMTNQ6UX39 209 aa6.15□□□□□ -1.43
CDHR3-201ENST00000317716 CD177Q8N6Q3 437 aa6.15□□□□□ -1.43
CDHR3-201ENST00000317716 TTTY13Q9BZ97 58 aa6.15□□□□□ -1.43
CDHR3-201ENST00000317716 INSIG2Q9Y5U4 225 aa6.15□□□□□ -1.43
CDHR3-201ENST00000317716 D6R8Y8 96 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 F5H697 171 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 M0R3E3 92 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 ESDP10768 282 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 IGHV1-2P23083 117 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 IFI27P40305 119 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms