RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PYGO2Q9BRQ0 406 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 KIR2DL5BA0A0G2JN68 375 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 KIR2DL5BA0A0G2JPC4 375 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 H3BUA1 57 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 SLC25A20O43772 301 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 APOMO95445 188 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 PATE4P0C8F1 98 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 SAA1P0DJI8 122 aaPredicted RBP7.29□□□□□ -1.24
COL6A5-202ENST00000312481 KIR2DL5AQ8N109 375 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 SIGLEC12Q96PQ1 595 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 SSBP3Q9BWW4 388 aaPredicted RBP7.29□□□□□ -1.24
COL6A5-202ENST00000312481 A0A0A6YYD4 124 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 IGFBP2P18065 325 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 ADMP35318 185 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 FAM90A2PQ658T7 463 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 ATOH7Q8N100 152 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 ZNF114Q8NC26 417 aa7.29□□□□□ -1.24
COL6A5-202ENST00000312481 TMEM8BA6NDV4 472 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 OCC1Q8TAD7 63 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 NEU1Q99519 415 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 C1QTNF4Q9BXJ3 329 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 TRBV6-1A0A0K0K1D8 114 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 A0A1B0GWB2 263 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 LGALS9BQ3B8N2 356 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 LGALS9CQ6DKI2 356 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 IGF2-ASQ6U949 168 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 H3BVH4 76 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 CRXO43186 299 aaPredicted RBP7.28□□□□□ -1.24
COL6A5-202ENST00000312481 IGHG3P01860 377 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 KIR3DL3Q8N743 410 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 PRR13Q9NZ81 148 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 NPFFO15130 113 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 UNQ5815/PRO19632Q6UWF5 114 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 MBD3L4A6NDZ8 208 aaPredicted RBP7.28□□□□□ -1.24
COL6A5-202ENST00000312481 MBD3L3A6NE82 208 aaPredicted RBP7.28□□□□□ -1.24
COL6A5-202ENST00000312481 MBD3L5A6NJ08 208 aaPredicted RBP7.28□□□□□ -1.24
COL6A5-202ENST00000312481 MGPP08493 103 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 MBD3L2Q8NHZ7 208 aaPredicted RBP7.28□□□□□ -1.24
COL6A5-202ENST00000312481 LGALS1P09382 135 aaKnown RBP7.28□□□□□ -1.24
COL6A5-202ENST00000312481 PSG3Q16557 428 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 Q6P435 159 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 BATF2Q8N1L9 274 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 NPFFR1Q9GZQ6 430 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 KAAG1Q9UBP8 84 aa7.28□□□□□ -1.24
COL6A5-202ENST00000312481 PRSS46E5RG02 174 aa7.27□□□□□ -1.24
COL6A5-202ENST00000312481 GFRA3O60609 400 aa7.27□□□□□ -1.24
COL6A5-202ENST00000312481 PFN1P07737 140 aaKnown RBP7.27□□□□□ -1.24
COL6A5-202ENST00000312481 MST1P26927 711 aa7.27□□□□□ -1.24
COL6A5-202ENST00000312481 C20orf78Q9BR46 151 aa7.27□□□□□ -1.24
COL6A5-202ENST00000312481 GRIFINA4D1Z8 144 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 CNTFRP26992 372 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 TFF3Q07654 80 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 RNF138Q8WVD3 245 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 SPINK9Q5DT21 86 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 ZNF138P52744 262 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 ZFYVE26Q68DK2 2539 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 M0R2P5 195 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 TIAF1O95411 115 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 ATP5G1P05496 136 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 ATP5G3P48201 142 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 C16orf47Q6ZP98 133 aaPredicted RBP7.27□□□□□ -1.25
COL6A5-202ENST00000312481 AMN1Q8IY45 258 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 FSTL3O95633 263 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 LYZL4Q96KX0 146 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 A0A0G2JMM0 328 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 A0A1W2PPB8 328 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 KIR3DP1A8MWS1 328 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 CD55P08174 381 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 PF4V1P10720 104 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 ZNF479Q96JC4 524 aa7.27□□□□□ -1.25
COL6A5-202ENST00000312481 MLNRO43193 412 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 TCRAP04437 139 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 FHL1Q13642 323 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 PRSS8Q16651 343 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 DPH3P1Q9H4G8 78 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 F11RQ9Y624 299 aaKnown RBP7.26□□□□□ -1.25
COL6A5-202ENST00000312481 GAGE12BA1L429 117 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 PSG8Q9UQ74 426 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 TGFBR3LH3BV60 316 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 SRD5A1P18405 259 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 KLRB1Q12918 225 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 TRBV7-9A0A0J9YWB2 115 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 ZNF137PP52743 207 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 ECSCRQ19T08 205 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 RAMP3O60896 148 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 HLA-DRB4P13762 266 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 IGFL3Q6UXB1 125 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 THAP8Q8NA92 274 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 NRTNQ99748 197 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 HLA-DRB4X5D2U9 266 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 LOC102724200A0A096LPH7 203 aaPredicted RBP7.26□□□□□ -1.25
COL6A5-202ENST00000312481 CCDC168Q8NDH2 2452 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 CLPSP04118 112 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 OR13A1Q8NGR1 328 aa7.26□□□□□ -1.25
COL6A5-202ENST00000312481 PRKNO60260 465 aaPredicted RBP7.25□□□□□ -1.25
COL6A5-202ENST00000312481 C14orf144Q96I85 54 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 IGKV1D-13A0A0B4J2D9 117 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 IGKV1-13P0DP09 117 aa7.25□□□□□ -1.25
COL6A5-202ENST00000312481 ZNF48Q96MX3 618 aaPredicted RBP7.25□□□□□ -1.25
COL6A5-202ENST00000312481 LRRK2Q5S007 2527 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms