RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 WDR83OSQ9Y284 106 aa13.23□□□□□ -0.29
CCS-201ENST00000310190 DNAH7Q8WXX0 4024 aa13.22□□□□□ -0.29
CCS-201ENST00000310190 MPC2O95563 127 aa13.22□□□□□ -0.29
CCS-201ENST00000310190 BCAP31P51572 246 aa13.22□□□□□ -0.29
CCS-201ENST00000310190 LYZP61626 148 aa13.22□□□□□ -0.29
CCS-201ENST00000310190 HAGHQ16775 308 aa13.22□□□□□ -0.29
CCS-201ENST00000310190 ZNF546Q86UE3 836 aa13.22□□□□□ -0.29
CCS-201ENST00000310190 GPR82Q96P67 336 aa13.22□□□□□ -0.29
CCS-201ENST00000310190 CITED4Q96RK1 184 aa13.22□□□□□ -0.29
CCS-201ENST00000310190 UQCC1Q9NVA1 299 aa13.22□□□□□ -0.29
CCS-201ENST00000310190 SELENOKQ9Y6D0 94 aa13.22□□□□□ -0.29
CCS-201ENST00000310190 IGHV3-66A0A0C4DH42 116 aa13.21□□□□□ -0.29
CCS-201ENST00000310190 KIR2DL5BA0A0G2JN68 375 aa13.21□□□□□ -0.29
CCS-201ENST00000310190 KIR2DL5BA0A0G2JPC4 375 aa13.21□□□□□ -0.29
CCS-201ENST00000310190 CST7O76096 145 aa13.21□□□□□ -0.29
CCS-201ENST00000310190 RRAS2P62070 204 aaPredicted RBP13.21□□□□□ -0.29
CCS-201ENST00000310190 OR2F1Q13607 317 aa13.21□□□□□ -0.29
CCS-201ENST00000310190 SIGLEC15Q6ZMC9 328 aa13.21□□□□□ -0.29
CCS-201ENST00000310190 S100A7AQ86SG5 101 aa13.21□□□□□ -0.29
CCS-201ENST00000310190 KIR2DL5AQ8N109 375 aa13.21□□□□□ -0.29
CCS-201ENST00000310190 KIR2DL5BQ8NHK3 375 aa13.21□□□□□ -0.29
CCS-201ENST00000310190 TMEM147Q9BVK8 224 aa13.21□□□□□ -0.29
CCS-201ENST00000310190 WFDC10AQ9H1F0 79 aa13.21□□□□□ -0.29
CCS-201ENST00000310190 MAP6D1Q9H9H5 199 aa13.21□□□□□ -0.29
CCS-201ENST00000310190 NRN1Q9NPD7 142 aa13.21□□□□□ -0.29
CCS-201ENST00000310190 OR5AC2Q9NZP5 309 aa13.21□□□□□ -0.29
CCS-201ENST00000310190 RNF24Q9Y225 148 aa13.21□□□□□ -0.29
CCS-201ENST00000310190 SMCO3A2RU48 225 aa13.2□□□□□ -0.3
CCS-201ENST00000310190 AGPAT2O15120 278 aa13.2□□□□□ -0.3
CCS-201ENST00000310190 MPDU1O75352 247 aa13.2□□□□□ -0.3
CCS-201ENST00000310190 SAMD13Q5VXD3 122 aa13.2□□□□□ -0.3
CCS-201ENST00000310190 PBDC1Q9BVG4 233 aa13.2□□□□□ -0.3
CCS-201ENST00000310190 ZNF98A6NK75 572 aa13.19□□□□□ -0.3
CCS-201ENST00000310190 DNASE2O00115 360 aaPredicted RBP13.19□□□□□ -0.3
CCS-201ENST00000310190 CXCL3P19876 107 aa13.19□□□□□ -0.3
CCS-201ENST00000310190 GATA2P23769 480 aaPredicted RBP13.19□□□□□ -0.3
CCS-201ENST00000310190 PRR20EP86478 221 aa13.19□□□□□ -0.3
CCS-201ENST00000310190 PRR20CP86479 221 aa13.19□□□□□ -0.3
CCS-201ENST00000310190 PRR20DP86480 221 aa13.19□□□□□ -0.3
CCS-201ENST00000310190 PRR20BP86481 221 aa13.19□□□□□ -0.3
CCS-201ENST00000310190 PRR20AP86496 221 aa13.19□□□□□ -0.3
CCS-201ENST00000310190 RAB31Q13636 194 aa13.19□□□□□ -0.3
CCS-201ENST00000310190 MGST2Q99735 147 aa13.19□□□□□ -0.3
CCS-201ENST00000310190 GGTLC1Q9BX51 225 aa13.19□□□□□ -0.3
CCS-201ENST00000310190 MED28Q9H204 178 aa13.19□□□□□ -0.3
CCS-201ENST00000310190 U3KQK5 164 aa13.19□□□□□ -0.3
CCS-201ENST00000310190 LOC102724200A0A096LPH7 203 aaPredicted RBP13.18□□□□□ -0.3
CCS-201ENST00000310190 H3BRN7 92 aa13.18□□□□□ -0.3
CCS-201ENST00000310190 UBE2CO00762 179 aa13.18□□□□□ -0.3
CCS-201ENST00000310190 HYPMO75409 117 aa13.18□□□□□ -0.3
CCS-201ENST00000310190 LINC00869P0C866 280 aa13.18□□□□□ -0.3
CCS-201ENST00000310190 RPL29P47914 159 aaKnown RBP13.18□□□□□ -0.3
CCS-201ENST00000310190 EWSR1Q01844 656 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCS-201ENST00000310190 GBGT1Q8N5D6 347 aa13.18□□□□□ -0.3
CCS-201ENST00000310190 SPATA25Q9BR10 227 aa13.18□□□□□ -0.3
CCS-201ENST00000310190 SHANK2-AS3Q9BTD1 123 aa13.18□□□□□ -0.3
CCS-201ENST00000310190 ZMAT4Q9H898 229 aa13.18□□□□□ -0.3
CCS-201ENST00000310190 ELOA3CA0A087WX78 387 aaPredicted RBP13.17□□□□□ -0.3
CCS-201ENST00000310190 CAMLGP49069 296 aa13.17□□□□□ -0.3
CCS-201ENST00000310190 MEOX2P50222 304 aa13.17□□□□□ -0.3
CCS-201ENST00000310190 RPL11P62913 178 aaKnown RBP13.17□□□□□ -0.3
CCS-201ENST00000310190 NHLH2Q02577 135 aa13.17□□□□□ -0.3
CCS-201ENST00000310190 PATE2Q6UY27 113 aa13.17□□□□□ -0.3
CCS-201ENST00000310190 TMEM217Q8N7C4 229 aa13.17□□□□□ -0.3
CCS-201ENST00000310190 STXBP6Q8NFX7 210 aa13.17□□□□□ -0.3
CCS-201ENST00000310190 OR11H7Q8NGC8 314 aa13.17□□□□□ -0.3
CCS-201ENST00000310190 OR1B1Q8NGR6 318 aa13.17□□□□□ -0.3
CCS-201ENST00000310190 ASCL2Q99929 193 aa13.17□□□□□ -0.3
CCS-201ENST00000310190 SLC25A39Q9BZJ4 359 aaPredicted RBP13.17□□□□□ -0.3
CCS-201ENST00000310190 HIGD1AQ9Y241 93 aa13.17□□□□□ -0.3
CCS-201ENST00000310190 SOCS3O14543 225 aa13.16□□□□□ -0.3
CCS-201ENST00000310190 GIPP09681 153 aaPredicted RBP13.16□□□□□ -0.3
CCS-201ENST00000310190 ORM2P19652 201 aa13.16□□□□□ -0.3
CCS-201ENST00000310190 RAP2BP61225 183 aa13.16□□□□□ -0.3
CCS-201ENST00000310190 OPCMLQ14982 345 aa13.16□□□□□ -0.3
CCS-201ENST00000310190 FCN2Q15485 313 aa13.16□□□□□ -0.3
CCS-201ENST00000310190 LRRC37A5PQ49AS3 106 aa13.16□□□□□ -0.3
CCS-201ENST00000310190 Q6ZWC4 215 aa13.16□□□□□ -0.3
CCS-201ENST00000310190 FAM24BQ8N5W8 94 aa13.16□□□□□ -0.3
CCS-201ENST00000310190 UBQLN2Q9UHD9 624 aa13.16□□□□□ -0.3
CCS-201ENST00000310190 TP53TG1Q9Y2A0 90 aa13.16□□□□□ -0.3
CCS-201ENST00000310190 IGKV3-7A0A075B6H7 116 aa13.15□□□□□ -0.3
CCS-201ENST00000310190 GALR1P47211 349 aa13.15□□□□□ -0.3
CCS-201ENST00000310190 TFPI2P48307 235 aa13.15□□□□□ -0.3
CCS-201ENST00000310190 APOC4P55056 127 aa13.15□□□□□ -0.3
CCS-201ENST00000310190 OR8I2Q8N0Y5 310 aa13.15□□□□□ -0.3
CCS-201ENST00000310190 OR5C1Q8NGR4 320 aa13.15□□□□□ -0.3
CCS-201ENST00000310190 C17orf77Q96MU5 243 aa13.15□□□□□ -0.3
CCS-201ENST00000310190 PARD6GQ9BYG4 376 aaPredicted RBP13.15□□□□□ -0.3
CCS-201ENST00000310190 HSPB11Q9Y547 144 aa13.15□□□□□ -0.3
CCS-201ENST00000310190 ISLRO14498 428 aa13.14□□□□□ -0.31
CCS-201ENST00000310190 RPL7P18124 248 aaKnown RBP13.14□□□□□ -0.31
CCS-201ENST00000310190 PSMB3P49720 205 aa13.14□□□□□ -0.31
CCS-201ENST00000310190 DEFB131AP59861 70 aa13.14□□□□□ -0.31
CCS-201ENST00000310190 SNRPD3P62318 126 aaKnown RBP13.14□□□□□ -0.31
CCS-201ENST00000310190 FGL1Q08830 312 aa13.14□□□□□ -0.31
CCS-201ENST00000310190 WFDC3Q8IUB2 231 aa13.14□□□□□ -0.31
CCS-201ENST00000310190 CLUHP3Q96NS8 147 aa13.14□□□□□ -0.31
CCS-201ENST00000310190 RCHY1Q96PM5 261 aa13.14□□□□□ -0.31
CCS-201ENST00000310190 ARL6Q9H0F7 186 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms