RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 S100A8P05109 93 aa17.64■□□□□ 0.41
PDLIM2-202ENST00000308354 LY6EQ16553 131 aa17.64■□□□□ 0.41
PDLIM2-202ENST00000308354 OR10G8Q8NGN5 311 aa17.64■□□□□ 0.41
PDLIM2-202ENST00000308354 SGMS2Q8NHU3 365 aa17.64■□□□□ 0.41
PDLIM2-202ENST00000308354 C5orf56Q8N8D9 126 aa17.63■□□□□ 0.41
PDLIM2-202ENST00000308354 LINC01356Q8N9X3 169 aa17.63■□□□□ 0.41
PDLIM2-202ENST00000308354 LY96Q9Y6Y9 160 aa17.63■□□□□ 0.41
PDLIM2-202ENST00000308354 TRAV20A0A0B4J274 112 aa17.63■□□□□ 0.41
PDLIM2-202ENST00000308354 IFITM10A6NMD0 228 aa17.63■□□□□ 0.41
PDLIM2-202ENST00000308354 TGFAP01135 160 aa17.63■□□□□ 0.41
PDLIM2-202ENST00000308354 LYZP61626 148 aa17.63■□□□□ 0.41
PDLIM2-202ENST00000308354 OR5I1Q13606 314 aa17.63■□□□□ 0.41
PDLIM2-202ENST00000308354 LEMD1Q68G75 181 aa17.63■□□□□ 0.41
PDLIM2-202ENST00000308354 UNQ5815/PRO19632Q6UWF5 114 aa17.63■□□□□ 0.41
PDLIM2-202ENST00000308354 MEGF9Q9H1U4 602 aa17.63■□□□□ 0.41
PDLIM2-202ENST00000308354 G3V318 75 aa17.62■□□□□ 0.41
PDLIM2-202ENST00000308354 HYPMO75409 117 aa17.62■□□□□ 0.41
PDLIM2-202ENST00000308354 NDUFB8O95169 186 aa17.62■□□□□ 0.41
PDLIM2-202ENST00000308354 GFI1BQ5VTD9 330 aa17.62■□□□□ 0.41
PDLIM2-202ENST00000308354 IMMP2LQ96T52 175 aa17.62■□□□□ 0.41
PDLIM2-202ENST00000308354 HELZ2Q9BYK8 2649 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-202ENST00000308354 PCP4L1A6NKN8 68 aa17.62■□□□□ 0.41
PDLIM2-202ENST00000308354 TYMSP04818 313 aa17.62■□□□□ 0.41
PDLIM2-202ENST00000308354 CDX1P47902 265 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-202ENST00000308354 Q5PR19 223 aa17.62■□□□□ 0.41
PDLIM2-202ENST00000308354 J3QKU1 62 aa17.61■□□□□ 0.41
PDLIM2-202ENST00000308354 SLC17A3O00476 420 aa17.61■□□□□ 0.41
PDLIM2-202ENST00000308354 FOXL1Q12952 345 aa17.61■□□□□ 0.41
PDLIM2-202ENST00000308354 H3BUX3 64 aa17.6■□□□□ 0.41
PDLIM2-202ENST00000308354 AMY1AP04745 511 aa17.6■□□□□ 0.41
PDLIM2-202ENST00000308354 RD3LP0DJH9 198 aa17.6■□□□□ 0.41
PDLIM2-202ENST00000308354 ZNF329Q86UD4 541 aa17.6■□□□□ 0.41
PDLIM2-202ENST00000308354 LINC00479Q96M42 142 aa17.6■□□□□ 0.41
PDLIM2-202ENST00000308354 LINC00527Q9UJ94 153 aa17.6■□□□□ 0.41
PDLIM2-202ENST00000308354 MOB4Q9Y3A3 225 aa17.6■□□□□ 0.41
PDLIM2-202ENST00000308354 ZNF320A2RRD8 509 aa17.59■□□□□ 0.41
PDLIM2-202ENST00000308354 GNG7O60262 68 aa17.59■□□□□ 0.41
PDLIM2-202ENST00000308354 PLP1P60201 277 aa17.59■□□□□ 0.41
PDLIM2-202ENST00000308354 BLNKQ8WV28 456 aa17.59■□□□□ 0.41
PDLIM2-202ENST00000308354 TCEAL7Q9BRU2 100 aa17.59■□□□□ 0.41
PDLIM2-202ENST00000308354 BEX4Q9NWD9 120 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-202ENST00000308354 SMIM6P0DI80 62 aa17.59■□□□□ 0.41
PDLIM2-202ENST00000308354 ERVFC1-1P60608 527 aa17.59■□□□□ 0.41
PDLIM2-202ENST00000308354 Q56UQ5 140 aa17.59■□□□□ 0.41
PDLIM2-202ENST00000308354 PDZD11Q5EBL8 140 aa17.59■□□□□ 0.41
PDLIM2-202ENST00000308354 IGF2BP2-AS1Q96M15 143 aa17.59■□□□□ 0.41
PDLIM2-202ENST00000308354 FBXL7Q9UJT9 491 aa17.59■□□□□ 0.41
PDLIM2-202ENST00000308354 F8W735 103 aaPredicted RBP17.58■□□□□ 0.4
PDLIM2-202ENST00000308354 GATA3P23771 443 aa17.58■□□□□ 0.4
PDLIM2-202ENST00000308354 RANP62826 216 aaKnown RBP17.58■□□□□ 0.4
PDLIM2-202ENST00000308354 C9orf152Q5JTZ5 239 aa17.58■□□□□ 0.4
PDLIM2-202ENST00000308354 ACTL10Q5JWF8 245 aa17.58■□□□□ 0.4
PDLIM2-202ENST00000308354 STXBP6Q8NFX7 210 aa17.58■□□□□ 0.4
PDLIM2-202ENST00000308354 C21orf62Q9NYP8 219 aa17.58■□□□□ 0.4
PDLIM2-202ENST00000308354 IGLV2-8P01709 118 aa17.57■□□□□ 0.4
PDLIM2-202ENST00000308354 S100A9P06702 114 aaKnown RBP17.57■□□□□ 0.4
PDLIM2-202ENST00000308354 MFAP4P55083 255 aa17.57■□□□□ 0.4
PDLIM2-202ENST00000308354 THYN1Q9P016 225 aa17.57■□□□□ 0.4
PDLIM2-202ENST00000308354 HIGD1AQ9Y241 93 aa17.57■□□□□ 0.4
PDLIM2-202ENST00000308354 GP9P14770 177 aa17.56■□□□□ 0.4
PDLIM2-202ENST00000308354 LOXL1Q08397 574 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-202ENST00000308354 BCL6BQ8N143 479 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-202ENST00000308354 HIST3H2BBQ8N257 126 aa17.56■□□□□ 0.4
PDLIM2-202ENST00000308354 FAM110DQ8TAY7 271 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-202ENST00000308354 Q96MF0 132 aa17.56■□□□□ 0.4
PDLIM2-202ENST00000308354 GPR61Q9BZJ8 451 aa17.56■□□□□ 0.4
PDLIM2-202ENST00000308354 RNASE7Q9H1E1 156 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-202ENST00000308354 OR2T8A6NH00 312 aa17.56■□□□□ 0.4
PDLIM2-202ENST00000308354 MYCNOSP40205 109 aa17.56■□□□□ 0.4
PDLIM2-202ENST00000308354 NHLRC2Q8NBF2 726 aa17.56■□□□□ 0.4
PDLIM2-202ENST00000308354 MS4A10Q96PG2 267 aa17.56■□□□□ 0.4
PDLIM2-202ENST00000308354 IL36BQ9NZH7 164 aa17.56■□□□□ 0.4
PDLIM2-202ENST00000308354 V9GYV3 84 aa17.56■□□□□ 0.4
PDLIM2-202ENST00000308354 H3BTX0 84 aa17.55■□□□□ 0.4
PDLIM2-202ENST00000308354 PEX7O00628 323 aa17.55■□□□□ 0.4
PDLIM2-202ENST00000308354 GNG5P63218 68 aa17.55■□□□□ 0.4
PDLIM2-202ENST00000308354 CDC42EP3Q9UKI2 254 aa17.55■□□□□ 0.4
PDLIM2-202ENST00000308354 IL4P05112 153 aa17.55■□□□□ 0.4
PDLIM2-202ENST00000308354 NBEAP1P0C6P0 100 aa17.55■□□□□ 0.4
PDLIM2-202ENST00000308354 MGST1P10620 155 aaKnown RBP17.55■□□□□ 0.4
PDLIM2-202ENST00000308354 RPL15P61313 204 aaKnown RBP17.55■□□□□ 0.4
PDLIM2-202ENST00000308354 SLC25A39Q9BZJ4 359 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-202ENST00000308354 TRAV34A0A0B4J273 112 aa17.54■□□□□ 0.4
PDLIM2-202ENST00000308354 GCGP01275 180 aa17.54■□□□□ 0.4
PDLIM2-202ENST00000308354 IGHV4-31P0DP07 118 aa17.54■□□□□ 0.4
PDLIM2-202ENST00000308354 CNN1P51911 297 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-202ENST00000308354 C15orf32Q32M92 178 aa17.54■□□□□ 0.4
PDLIM2-202ENST00000308354 ZNF491Q8N8L2 437 aa17.54■□□□□ 0.4
PDLIM2-202ENST00000308354 PSMG3-AS1Q96PY0 264 aa17.54■□□□□ 0.4
PDLIM2-202ENST00000308354 GAR1Q9NY12 217 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-202ENST00000308354 RHOGP84095 191 aa17.53■□□□□ 0.4
PDLIM2-202ENST00000308354 LRRC75A-AS1Q8N1F1 130 aa17.53■□□□□ 0.4
PDLIM2-202ENST00000308354 BTF3L4Q96K17 158 aa17.53■□□□□ 0.4
PDLIM2-202ENST00000308354 PITPNC1Q9UKF7 332 aa17.53■□□□□ 0.4
PDLIM2-202ENST00000308354 CREBBPQ92793 2442 aa17.53■□□□□ 0.4
PDLIM2-202ENST00000308354 CR1P17927 2039 aa17.53■□□□□ 0.4
PDLIM2-202ENST00000308354 TOMM40O96008 361 aa17.53■□□□□ 0.4
PDLIM2-202ENST00000308354 RNF125Q96EQ8 232 aa17.53■□□□□ 0.4
PDLIM2-202ENST00000308354 MRPL27Q9P0M9 148 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-202ENST00000308354 TEX15Q9BXT5 2789 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms