RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 OR11H7Q8NGC8 314 aa8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 OR5C1Q8NGR4 320 aa8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 GLMPQ8WWB7 406 aa8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 MS4A6AQ9H2W1 248 aa8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 SRD5A3Q9H8P0 318 aa8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 DOK5Q9P104 306 aa8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 UBQLN2Q9UHD9 624 aa8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 U3KQE9 123 aa8.24□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 TRAV2A0A0B4J234 112 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 AGPAT2O15120 278 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 BUB3O43684 328 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 OR5G3P0C626 314 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 FRMD6-AS1P0C7T7 363 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 FGF7P21781 194 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 CAMLGP49069 296 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 NHLH2Q02577 135 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 CLINT1Q14677 625 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 VWC2Q2TAL6 325 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 PXDC1Q5TGL8 231 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 OR8I2Q8N0Y5 310 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 DEFB125Q8N687 156 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 MGST2Q99735 147 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 WFDC10AQ9H1F0 79 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 SLC25A22Q9H936 323 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 RNF24Q9Y225 148 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 HIGD1AQ9Y241 93 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 HSPB11Q9Y547 144 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 DNAH3Q8TD57 4116 aa8.23□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 A8MZ25 164 aa8.22□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 COX7A2P2O60397 106 aa8.22□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 MPDU1O75352 247 aa8.22□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 HYPMO75409 117 aa8.22□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 RPL12P30050 165 aaKnown RBP8.22□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 C1orf194Q5T5A4 169 aa8.22□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 TMEM182Q6ZP80 229 aaPredicted RBP8.22□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 Q6ZRG5 221 aa8.22□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 FAM110AQ9BQ89 295 aa8.22□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 RNF126Q9BV68 326 aa8.22□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 ARL6Q9H0F7 186 aa8.22□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 WDR83OSQ9Y284 106 aa8.22□□□□□ -1.09
CSPG4P1Y-201ENST00000306641 LYL1P12980 280 aa8.21□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 GALR1P47211 349 aa8.21□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 PLP1P60201 277 aa8.21□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 ODF3L2Q3SX64 289 aa8.21□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 ZNF709Q8N972 641 aa8.21□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 OR1L4Q8NGR5 311 aa8.21□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 GPR82Q96P67 336 aa8.21□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 ATP5SQ99766 215 aa8.21□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 ASCL2Q99929 193 aa8.21□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 GGTLC1Q9BX51 225 aa8.21□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 ARV1Q9H2C2 271 aa8.21□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 NRN1Q9NPD7 142 aa8.21□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 KCNIP2Q9NS61 270 aa8.21□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 C19orf73Q9NVV2 129 aa8.21□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 ELOA3CA0A087WX78 387 aaPredicted RBP8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 ZNF98A6NK75 572 aa8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 C17orf112F2Z3M2 114 aa8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 H3BRN7 92 aa8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 K7EQG2 157 aa8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 IFNA5P01569 189 aa8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 NHLRC4P0CG21 123 aaPredicted RBP8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 B2MP61769 119 aa8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 SNRPD3P62318 126 aaKnown RBP8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 OPCMLQ14982 345 aa8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 SAMD13Q5VXD3 122 aa8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 MIC13Q5XKP0 118 aa8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 STPG3Q8N7X2 389 aa8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 PFDN5Q99471 154 aa8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 SLC25A39Q9BZJ4 359 aaPredicted RBP8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 SMIM3Q9BZL3 60 aa8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 ZMAT4Q9H898 229 aa8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 MAP6D1Q9H9H5 199 aa8.2□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 FXYD6-FXYD2A0A087WZ82 144 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 LOC102724200A0A096LPH7 203 aaPredicted RBP8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 ZNF688P0C7X2 276 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 RPL7P18124 248 aaKnown RBP8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 ATF4P18848 351 aaPredicted RBP8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 ID1P41134 155 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 RPL29P47914 159 aaKnown RBP8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 MEOX2P50222 304 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 DEFB131AP59861 70 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 C10orf113Q5VZT2 155 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 LINC00305Q7Z4B0 112 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 APRG1Q8IVJ8 170 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 SBSPONQ8IVN8 264 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 INO80EQ8NBZ0 244 aaPredicted RBP8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 OR2T35Q8NGX2 323 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 SCGB1C1Q8TD33 95 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 DCANP1Q8TF63 244 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 UHRF2Q96PU4 802 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 SHANK2-AS3Q9BTD1 123 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 SCRT1Q9BWW7 348 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 NPCDR1Q9BY65 106 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 WDR61Q9GZS3 305 aaKnown RBP8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 SLC25A32Q9H2D1 315 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 PXMP4Q9Y6I8 212 aa8.19□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 APOC4P55056 127 aa8.18□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 PRR20EP86478 221 aa8.18□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 PRR20CP86479 221 aa8.18□□□□□ -1.1
CSPG4P1Y-201ENST00000306641 PRR20DP86480 221 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms