RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 SPACA3Q8IXA5 215 aa10.81□□□□□ -0.68
DDX54-201ENST00000306014 CHCHD1Q96BP2 118 aaKnown RBP10.81□□□□□ -0.68
DDX54-201ENST00000306014 METTL26Q96S19 204 aa10.81□□□□□ -0.68
DDX54-201ENST00000306014 ST20Q9HBF5 79 aa10.81□□□□□ -0.68
DDX54-201ENST00000306014 NUPR1O60356 82 aa10.81□□□□□ -0.68
DDX54-201ENST00000306014 RPL15P61313 204 aaKnown RBP10.81□□□□□ -0.68
DDX54-201ENST00000306014 ZNF474Q6S9Z5 364 aaPredicted RBP10.81□□□□□ -0.68
DDX54-201ENST00000306014 RASL11AQ6T310 242 aa10.81□□□□□ -0.68
DDX54-201ENST00000306014 HIST1H4GQ99525 98 aa10.81□□□□□ -0.68
DDX54-201ENST00000306014 ZGRF1Q86YA3 2104 aa10.81□□□□□ -0.68
DDX54-201ENST00000306014 WNT2P09544 360 aa10.81□□□□□ -0.68
DDX54-201ENST00000306014 Q6AWC8 147 aa10.81□□□□□ -0.68
DDX54-201ENST00000306014 NEUROG1Q92886 237 aa10.81□□□□□ -0.68
DDX54-201ENST00000306014 DCAF16Q9NXF7 216 aa10.81□□□□□ -0.68
DDX54-201ENST00000306014 H3BUT2 72 aa10.81□□□□□ -0.68
DDX54-201ENST00000306014 FER1L6-AS1Q8NA97 138 aa10.81□□□□□ -0.68
DDX54-201ENST00000306014 K7EN84 100 aa10.8□□□□□ -0.68
DDX54-201ENST00000306014 ZNF329Q86UD4 541 aa10.8□□□□□ -0.68
DDX54-201ENST00000306014 EML6Q6ZMW3 1958 aa10.8□□□□□ -0.68
DDX54-201ENST00000306014 SH2D7A6NKC9 451 aaPredicted RBP10.8□□□□□ -0.68
DDX54-201ENST00000306014 FNDC10F2Z333 226 aa10.8□□□□□ -0.68
DDX54-201ENST00000306014 TDGF1P13385 188 aa10.8□□□□□ -0.68
DDX54-201ENST00000306014 CACNG7P62955 275 aa10.8□□□□□ -0.68
DDX54-201ENST00000306014 SLAQ13239 276 aa10.8□□□□□ -0.68
DDX54-201ENST00000306014 ODF3L1Q8IXM7 274 aa10.8□□□□□ -0.68
DDX54-201ENST00000306014 RNASE6Q93091 150 aaKnown RBP10.8□□□□□ -0.68
DDX54-201ENST00000306014 KLRB1Q12918 225 aa10.8□□□□□ -0.68
DDX54-201ENST00000306014 ASCL2Q99929 193 aa10.8□□□□□ -0.68
DDX54-201ENST00000306014 A0A1B0GW15 77 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 CIDEAO60543 219 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 HTN1P15515 57 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 OR5AN1Q8NGI8 311 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 MUC22E2RYF6 1773 aaPredicted RBP10.79□□□□□ -0.68
DDX54-201ENST00000306014 LOXL3P58215 753 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 HERVK_113P61574 105 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 AMMECR1LQ6DCA0 310 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 FNDC4Q9H6D8 234 aaPredicted RBP10.79□□□□□ -0.68
DDX54-201ENST00000306014 MMP23AO75900 390 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 IGLV2-14P01704 120 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 C17orf58Q2M2W7 97 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 C11orf53Q8IXP5 236 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 RCHY1Q96PM5 261 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 SLC25A39Q9BZJ4 359 aaPredicted RBP10.79□□□□□ -0.68
DDX54-201ENST00000306014 LOC107984156A0A0G2JMH3 177 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 SYS1-DBNDD2H3BUS1 97 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 PSMB2P49721 201 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 ARL17AQ8IVW1 177 aa10.79□□□□□ -0.68
DDX54-201ENST00000306014 TIMM23O14925 209 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 SMIM13P0DJ93 91 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 IGLC2P0DOY2 106 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 IGLC3P0DOY3 106 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 IGHV1-8P0DP01 117 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 PPIFP30405 207 aaKnown RBP10.78□□□□□ -0.68
DDX54-201ENST00000306014 FXYD7P58549 80 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 TCF15Q12870 199 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 FOXC2Q99958 501 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 A0A087X0K7 114 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 NBR2O15453 112 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 VWC2Q2TAL6 325 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 KLF17Q5JT82 389 aaPredicted RBP10.78□□□□□ -0.68
DDX54-201ENST00000306014 ARPC1AQ92747 370 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 C11orf52Q96A22 123 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 PHLDA3Q9Y5J5 127 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 TMEM178BH3BS89 294 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 ITGB1BP1O14713 200 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 HIST1H1AQ02539 215 aaPredicted RBP10.78□□□□□ -0.68
DDX54-201ENST00000306014 LYRM7Q5U5X0 104 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 MRPL52Q86TS9 123 aaKnown RBP10.78□□□□□ -0.68
DDX54-201ENST00000306014 TRGV9Q99603 122 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 NAA38Q9BRA0 125 aaKnown RBP10.78□□□□□ -0.68
DDX54-201ENST00000306014 DOPEY2Q9Y3R5 2298 aa10.78□□□□□ -0.68
DDX54-201ENST00000306014 A0A1W2PPI3 338 aa10.77□□□□□ -0.68
DDX54-201ENST00000306014 DLX6P56179 175 aa10.77□□□□□ -0.68
DDX54-201ENST00000306014 TDRG1Q3Y452 100 aa10.77□□□□□ -0.68
DDX54-201ENST00000306014 LYPD2Q6UXB3 125 aa10.77□□□□□ -0.68
DDX54-201ENST00000306014 RPRMLQ8N4K4 120 aa10.77□□□□□ -0.68
DDX54-201ENST00000306014 OR10J6PQ8NGY7 276 aa10.77□□□□□ -0.68
DDX54-201ENST00000306014 MBD3L4A6NDZ8 208 aaPredicted RBP10.77□□□□□ -0.69
DDX54-201ENST00000306014 MBD3L3A6NE82 208 aaPredicted RBP10.77□□□□□ -0.69
DDX54-201ENST00000306014 MBD3L5A6NJ08 208 aaPredicted RBP10.77□□□□□ -0.69
DDX54-201ENST00000306014 H3BVH4 76 aa10.77□□□□□ -0.69
DDX54-201ENST00000306014 PVRIGQ6DKI7 326 aa10.77□□□□□ -0.69
DDX54-201ENST00000306014 MBD3L2Q8NHZ7 208 aaPredicted RBP10.77□□□□□ -0.69
DDX54-201ENST00000306014 SPCS1Q9Y6A9 102 aa10.77□□□□□ -0.69
DDX54-201ENST00000306014 PTPRSQ13332 1948 aa10.77□□□□□ -0.69
DDX54-201ENST00000306014 IGHV2-26A0A0B4J1V2 119 aa10.77□□□□□ -0.69
DDX54-201ENST00000306014 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.77□□□□□ -0.69
DDX54-201ENST00000306014 NPIPB5A8MRT5 1133 aa10.77□□□□□ -0.69
DDX54-201ENST00000306014 HBDP02042 147 aa10.77□□□□□ -0.69
DDX54-201ENST00000306014 SRRM4A7MD48 611 aaKnown RBP10.77□□□□□ -0.69
DDX54-201ENST00000306014 PRR20EP86478 221 aa10.77□□□□□ -0.69
DDX54-201ENST00000306014 PRR20CP86479 221 aa10.77□□□□□ -0.69
DDX54-201ENST00000306014 PRR20DP86480 221 aa10.77□□□□□ -0.69
DDX54-201ENST00000306014 PRR20BP86481 221 aa10.77□□□□□ -0.69
DDX54-201ENST00000306014 PRR20AP86496 221 aa10.77□□□□□ -0.69
DDX54-201ENST00000306014 UBE2V1Q13404 147 aa10.76□□□□□ -0.69
DDX54-201ENST00000306014 M0R381 172 aa10.76□□□□□ -0.69
DDX54-201ENST00000306014 M0R3E3 92 aa10.76□□□□□ -0.69
DDX54-201ENST00000306014 TEX43Q6ZNM6 134 aa10.76□□□□□ -0.69
DDX54-201ENST00000306014 D6R8Y8 96 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms