RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TGFBR3LH3BV60 316 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 TOMM40O96008 361 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 ZNF562Q6V9R5 426 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 NUP35Q8NFH5 326 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 ITLN2Q8WWU7 325 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-201ENST00000302516 DOPEY2Q9Y3R5 2298 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 MMP23AO75900 390 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 KIR3DS1Q14943 382 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 TRBV20-1A0A075B6N2 111 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 CTSBP07858 339 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 TMEM75Q8N9X5 138 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 PRR19A6NJB7 356 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 TIAF1O95411 115 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 MRPL14Q6P1L8 145 aaKnown RBP6.32□□□□□ -1.4
SF3B3-201ENST00000302516 DPH3P1Q9H4G8 78 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 TRAV12-3A0A0B4J271 114 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 PYYP10082 97 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 PSG3Q16557 428 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 TOMM7Q9P0U1 55 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 CD55P08174 381 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 INAFM2P0DMQ5 153 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 CHAC1Q9BUX1 264 aa6.32□□□□□ -1.4
SF3B3-201ENST00000302516 CACNA1EQ15878 2313 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 GAGE12BA1L429 117 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 CELA3BP08861 270 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 TDGF1P3P51864 188 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 TEX43Q6ZNM6 134 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 BCL6BQ8N143 479 aaPredicted RBP6.31□□□□□ -1.4
SF3B3-201ENST00000302516 FOXL2P58012 376 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 Q5PR19 223 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 SPTAN1Q13813 2472 aaKnown RBP6.31□□□□□ -1.4
SF3B3-201ENST00000302516 PAX8Q06710 450 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 MINOS1Q5TGZ0 78 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 ABHD17AQ96GS6 310 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 SPAG8Q99932 426 aaPredicted RBP6.31□□□□□ -1.4
SF3B3-201ENST00000302516 DEPPQ9NTK1 212 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 MINOS1-NBL1R4GNA1 71 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 A6NNC1 897 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 VCYO14598 125 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 IGHV3-23P01764 117 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 TCRAP04437 139 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 SPATA31B1PQ5VZV4 182 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 STHQ8IWL8 128 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 RASL10AQ92737 203 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 ITGB1BP1O14713 200 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 TGFAP01135 160 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 FAM223BA6NKX1 122 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 A8MWP6 167 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 SRRM5B3KS81 715 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 FAM223AQ8IWN6 122 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 ZNF492Q9P255 531 aa6.31□□□□□ -1.4
SF3B3-201ENST00000302516 PRR32B1ATL7 298 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 FLVCR1-AS1Q8TAF5 88 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 RNASE6Q93091 150 aaKnown RBP6.3□□□□□ -1.4
SF3B3-201ENST00000302516 SIGLEC12Q96PQ1 595 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 JMJD8Q96S16 334 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 TRAV8-1A0A0A6YYK1 113 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 IGHV3-66A0A0C4DH42 116 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 GATA2P23769 480 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-201ENST00000302516 QRFPP83859 136 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 C2orf82Q6UX34 121 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 C9orf139Q6ZV77 190 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 LINC00477Q96M19 166 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 IGKV3-20P01619 116 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 EVI2AP22794 236 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 TMEM249Q2WGJ8 235 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 SP9P0CG40 484 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 ARFGEF3Q5TH69 2177 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 CEP192Q8TEP8 1941 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 MYMXA0A1B0GTQ4 84 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 TNFRSF6BO95407 300 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 C10orf91Q5T1B1 145 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 A0A1B0GWJ7 208 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 DSCR9P59020 149 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 TMEM155Q4W5P6 130 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 PRADC1Q9BSG0 188 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 KLF12Q9Y4X4 402 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 NOTCH3Q9UM47 2321 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 TMEM8BA6NDV4 472 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 SMAD7O15105 426 aaKnown RBP6.3□□□□□ -1.4
SF3B3-201ENST00000302516 ZNF138P52744 262 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 TPTE2P1Q5T6R2 138 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 FDCSPQ8NFU4 85 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 ZNHIT1O43257 154 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 IL18BPO95998 194 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 COLCA1Q6ZS62 124 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 USMG5Q96IX5 58 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 DYSFO75923 2080 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 PKDREJQ9NTG1 2253 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 EML5Q05BV3 1969 aa6.3□□□□□ -1.4
SF3B3-201ENST00000302516 ADARB2-AS1A8MUL3 147 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 F8W1H4 67 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 M0R1W7 72 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 PYY3Q5JQD4 70 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 ZNF329Q86UD4 541 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 NABP1Q96AH0 204 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 TMEM141Q96I45 108 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 VSIRQ9H7M9 311 aa6.29□□□□□ -1.4
SF3B3-201ENST00000302516 RPP25LQ8N5L8 163 aaKnown RBP6.29□□□□□ -1.4
SF3B3-201ENST00000302516 MUC21A0A0G2JKD1 596 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms