RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 OR5B12Q96R08 314 aa18.95■□□□□ 0.62
GTF2A1-201ENST00000298173 TECRQ9NZ01 308 aaKnown RBP18.95■□□□□ 0.62
GTF2A1-201ENST00000298173 CLPSL1A2RUU4 121 aa18.94■□□□□ 0.62
GTF2A1-201ENST00000298173 LGALS1P09382 135 aaKnown RBP18.94■□□□□ 0.62
GTF2A1-201ENST00000298173 C8orf88P0DMB2 117 aa18.94■□□□□ 0.62
GTF2A1-201ENST00000298173 PROK1P58294 105 aa18.94■□□□□ 0.62
GTF2A1-201ENST00000298173 EIF4E3Q8N5X7 224 aaKnown RBP18.94■□□□□ 0.62
GTF2A1-201ENST00000298173 SLC25A39Q9BZJ4 359 aaPredicted RBP18.94■□□□□ 0.62
GTF2A1-201ENST00000298173 C2CD3Q4AC94 2353 aa18.93■□□□□ 0.62
GTF2A1-201ENST00000298173 TRAV5A0A0B4J249 113 aa18.93■□□□□ 0.62
GTF2A1-201ENST00000298173 RAB19A4D1S5 217 aa18.93■□□□□ 0.62
GTF2A1-201ENST00000298173 GGCTO75223 188 aaKnown RBP18.93■□□□□ 0.62
GTF2A1-201ENST00000298173 WFDC12Q8WWY7 111 aa18.93■□□□□ 0.62
GTF2A1-201ENST00000298173 ZNF503Q96F45 646 aa18.93■□□□□ 0.62
GTF2A1-201ENST00000298173 SLC25A2Q9BXI2 301 aa18.93■□□□□ 0.62
GTF2A1-201ENST00000298173 TMPRSS5Q9H3S3 457 aa18.93■□□□□ 0.62
GTF2A1-201ENST00000298173 RNF114Q9Y508 228 aa18.93■□□□□ 0.62
GTF2A1-201ENST00000298173 I3L521 148 aa18.92■□□□□ 0.62
GTF2A1-201ENST00000298173 CXorf1O96002 111 aa18.92■□□□□ 0.62
GTF2A1-201ENST00000298173 ARL14EPLP0DKL9 152 aa18.92■□□□□ 0.62
GTF2A1-201ENST00000298173 NDUFA4O00483 81 aa18.92■□□□□ 0.62
GTF2A1-201ENST00000298173 TAS2R45P59539 299 aa18.92■□□□□ 0.62
GTF2A1-201ENST00000298173 FAM210AQ96ND0 272 aa18.92■□□□□ 0.62
GTF2A1-201ENST00000298173 SHANK2-AS3Q9BTD1 123 aa18.92■□□□□ 0.62
GTF2A1-201ENST00000298173 PQLC2Q6ZP29 291 aa18.91■□□□□ 0.62
GTF2A1-201ENST00000298173 MAST4O15021 2626 aa18.91■□□□□ 0.62
GTF2A1-201ENST00000298173 H3BRN7 92 aa18.9■□□□□ 0.62
GTF2A1-201ENST00000298173 KHDC3LQ587J8 217 aa18.9■□□□□ 0.62
GTF2A1-201ENST00000298173 C18orf65Q6ZTR6 163 aa18.9■□□□□ 0.62
GTF2A1-201ENST00000298173 NIPBLQ6KC79 2804 aaeCLIP18.9■□□□□ 0.62
GTF2A1-201ENST00000298173 PSMB3P49720 205 aa18.89■□□□□ 0.61
GTF2A1-201ENST00000298173 GPHB5Q86YW7 130 aa18.89■□□□□ 0.61
GTF2A1-201ENST00000298173 SUN5Q8TC36 379 aa18.89■□□□□ 0.61
GTF2A1-201ENST00000298173 TEP1Q99973 2627 aaKnown RBP18.89■□□□□ 0.61
GTF2A1-201ENST00000298173 RABAC1Q9UI14 185 aa18.89■□□□□ 0.61
GTF2A1-201ENST00000298173 IGHV3OR16-8A0A075B7F1 116 aa18.89■□□□□ 0.61
GTF2A1-201ENST00000298173 CD28P10747 220 aa18.89■□□□□ 0.61
GTF2A1-201ENST00000298173 GCHFRP30047 84 aa18.89■□□□□ 0.61
GTF2A1-201ENST00000298173 SRSF3P84103 164 aaKnown RBP18.89■□□□□ 0.61
GTF2A1-201ENST00000298173 UNQ9165/PRO28630Q6UXU0 137 aa18.89■□□□□ 0.61
GTF2A1-201ENST00000298173 C4orf3Q8WVX3 66 aa18.89■□□□□ 0.61
GTF2A1-201ENST00000298173 ZNF98A6NK75 572 aa18.88■□□□□ 0.61
GTF2A1-201ENST00000298173 HAX1O00165 279 aa18.88■□□□□ 0.61
GTF2A1-201ENST00000298173 HSPB1P04792 205 aaKnown RBP18.88■□□□□ 0.61
GTF2A1-201ENST00000298173 S100A7AQ86SG5 101 aa18.88■□□□□ 0.61
GTF2A1-201ENST00000298173 RBFOX3A6NFN3 312 aa18.87■□□□□ 0.61
GTF2A1-201ENST00000298173 CD5P06127 495 aa18.87■□□□□ 0.61
GTF2A1-201ENST00000298173 GUK1Q16774 197 aa18.87■□□□□ 0.61
GTF2A1-201ENST00000298173 LEMD1Q68G75 181 aa18.87■□□□□ 0.61
GTF2A1-201ENST00000298173 GNG13Q9P2W3 67 aa18.87■□□□□ 0.61
GTF2A1-201ENST00000298173 U3KQE9 123 aa18.87■□□□□ 0.61
GTF2A1-201ENST00000298173 SETD2Q9BYW2 2564 aaPredicted RBP18.87■□□□□ 0.61
GTF2A1-201ENST00000298173 CRYBB3P26998 211 aa18.86■□□□□ 0.61
GTF2A1-201ENST00000298173 STXBP6Q8NFX7 210 aa18.86■□□□□ 0.61
GTF2A1-201ENST00000298173 TMEM190Q8WZ59 177 aa18.86■□□□□ 0.61
GTF2A1-201ENST00000298173 RARRES2Q99969 163 aa18.86■□□□□ 0.61
GTF2A1-201ENST00000298173 OR51M1Q9H341 326 aa18.86■□□□□ 0.61
GTF2A1-201ENST00000298173 IGHV4OR15-8A0A075B7B6 117 aa18.85■□□□□ 0.61
GTF2A1-201ENST00000298173 A0A087WW49 117 aa18.85■□□□□ 0.61
GTF2A1-201ENST00000298173 A0A1B0GUS0 222 aa18.85■□□□□ 0.61
GTF2A1-201ENST00000298173 OR7C2O60412 319 aa18.85■□□□□ 0.61
GTF2A1-201ENST00000298173 UQCC3Q6UW78 93 aa18.85■□□□□ 0.61
GTF2A1-201ENST00000298173 CITED4Q96RK1 184 aa18.85■□□□□ 0.61
GTF2A1-201ENST00000298173 HAGHQ16775 308 aa18.85■□□□□ 0.61
GTF2A1-201ENST00000298173 HIST2H2BDQ6DRA6 164 aa18.85■□□□□ 0.61
GTF2A1-201ENST00000298173 PAXXQ9BUH6 204 aa18.85■□□□□ 0.61
GTF2A1-201ENST00000298173 TMEM14CQ9P0S9 112 aa18.85■□□□□ 0.61
GTF2A1-201ENST00000298173 MRPS12O15235 138 aaKnown RBP18.84■□□□□ 0.61
GTF2A1-201ENST00000298173 BUB3O43684 328 aa18.84■□□□□ 0.61
GTF2A1-201ENST00000298173 PYYP10082 97 aa18.84■□□□□ 0.61
GTF2A1-201ENST00000298173 GP9P14770 177 aa18.84■□□□□ 0.61
GTF2A1-201ENST00000298173 PPT1P50897 306 aa18.84■□□□□ 0.61
GTF2A1-201ENST00000298173 FAM106AQ4KMX7 169 aa18.84■□□□□ 0.61
GTF2A1-201ENST00000298173 TOR2AQ5JU69 321 aa18.84■□□□□ 0.61
GTF2A1-201ENST00000298173 ZNF506Q5JVG8 444 aa18.84■□□□□ 0.61
GTF2A1-201ENST00000298173 IQCF2Q8IXL9 164 aa18.84■□□□□ 0.61
GTF2A1-201ENST00000298173 C11orf44Q8N8P7 122 aa18.84■□□□□ 0.61
GTF2A1-201ENST00000298173 FXYD5Q96DB9 178 aa18.84■□□□□ 0.61
GTF2A1-201ENST00000298173 CITED2Q99967 270 aaPredicted RBP18.84■□□□□ 0.61
GTF2A1-201ENST00000298173 C20orf24Q9BUV8 137 aa18.84■□□□□ 0.61
GTF2A1-201ENST00000298173 TMEM167BQ9NRX6 74 aa18.84■□□□□ 0.61
GTF2A1-201ENST00000298173 LOC102723971A0A1B0GUV8 181 aa18.83■□□□□ 0.61
GTF2A1-201ENST00000298173 OR10J4P0C629 311 aa18.83■□□□□ 0.61
GTF2A1-201ENST00000298173 BCL2P10415 239 aa18.83■□□□□ 0.61
GTF2A1-201ENST00000298173 NPPCP23582 126 aa18.83■□□□□ 0.61
GTF2A1-201ENST00000298173 S100A7P31151 101 aa18.83■□□□□ 0.61
GTF2A1-201ENST00000298173 RPEL1Q2QD12 228 aa18.83■□□□□ 0.61
GTF2A1-201ENST00000298173 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.83■□□□□ 0.61
GTF2A1-201ENST00000298173 METTL26Q96S19 204 aa18.83■□□□□ 0.61
GTF2A1-201ENST00000298173 EIF5A2Q9GZV4 153 aaKnown RBP18.83■□□□□ 0.61
GTF2A1-201ENST00000298173 MANBALQ9NQG1 85 aa18.83■□□□□ 0.61
GTF2A1-201ENST00000298173 TSSC4Q9Y5U2 329 aaPredicted RBP18.83■□□□□ 0.61
GTF2A1-201ENST00000298173 JMJD1CQ15652 2540 aa18.83■□□□□ 0.6
GTF2A1-201ENST00000298173 KLHL30-AS1Q8NEE0 82 aa18.82■□□□□ 0.6
GTF2A1-201ENST00000298173 SMDT1Q9H4I9 107 aa18.82■□□□□ 0.6
GTF2A1-201ENST00000298173 RNF24Q9Y225 148 aa18.82■□□□□ 0.6
GTF2A1-201ENST00000298173 C9JQL5 133 aa18.82■□□□□ 0.6
GTF2A1-201ENST00000298173 K7EMT4 169 aa18.82■□□□□ 0.6
GTF2A1-201ENST00000298173 ATP6V1G1O75348 118 aa18.82■□□□□ 0.6
GTF2A1-201ENST00000298173 IFNA1P01562 189 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms