RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ZNF586Q9NXT0 402 aa9.3□□□□□ -0.92
RHO-201ENST00000296271 CDC42EP3Q9UKI2 254 aa9.3□□□□□ -0.92
RHO-201ENST00000296271 ODF3BA8MYP8 253 aa9.3□□□□□ -0.92
RHO-201ENST00000296271 GDF5OSQ5U4N7 250 aa9.3□□□□□ -0.92
RHO-201ENST00000296271 ETFRF1Q6IPR1 90 aa9.3□□□□□ -0.92
RHO-201ENST00000296271 OSTCQ9NRP0 149 aa9.3□□□□□ -0.92
RHO-201ENST00000296271 NAT8BQ9UHF3 227 aa9.3□□□□□ -0.92
RHO-201ENST00000296271 EPDR1Q9UM22 224 aa9.3□□□□□ -0.92
RHO-201ENST00000296271 POLQO75417 2590 aa9.29□□□□□ -0.92
RHO-201ENST00000296271 PRTN3P24158 256 aa9.29□□□□□ -0.92
RHO-201ENST00000296271 GPR6P46095 362 aaPredicted RBP9.29□□□□□ -0.92
RHO-201ENST00000296271 CX3CL1P78423 397 aa9.29□□□□□ -0.92
RHO-201ENST00000296271 TMEM136Q6ZRR5 245 aa9.29□□□□□ -0.92
RHO-201ENST00000296271 ZNF664Q8N3J9 261 aa9.29□□□□□ -0.92
RHO-201ENST00000296271 RCHY1Q96PM5 261 aa9.29□□□□□ -0.92
RHO-201ENST00000296271 RNF2Q99496 336 aa9.29□□□□□ -0.92
RHO-201ENST00000296271 SLC25A39Q9BZJ4 359 aaPredicted RBP9.29□□□□□ -0.92
RHO-201ENST00000296271 Q9H3A6 140 aa9.29□□□□□ -0.92
RHO-201ENST00000296271 HOXB4P17483 251 aaPredicted RBP9.29□□□□□ -0.92
RHO-201ENST00000296271 C22orf15Q8WYQ4 148 aa9.29□□□□□ -0.92
RHO-201ENST00000296271 RBM14Q96PK6 669 aaKnown RBP9.29□□□□□ -0.92
RHO-201ENST00000296271 SSBP4Q9BWG4 385 aaPredicted RBP9.29□□□□□ -0.92
RHO-201ENST00000296271 IGHV3OR16-10A0A075B7F0 116 aa9.28□□□□□ -0.92
RHO-201ENST00000296271 CRISP2P16562 243 aa9.28□□□□□ -0.92
RHO-201ENST00000296271 TCF24Q7RTU0 167 aa9.28□□□□□ -0.92
RHO-201ENST00000296271 RASL11BQ9BPW5 248 aa9.28□□□□□ -0.92
RHO-201ENST00000296271 C7orf69Q9H7B7 122 aa9.28□□□□□ -0.92
RHO-201ENST00000296271 GNB4Q9HAV0 340 aa9.28□□□□□ -0.92
RHO-201ENST00000296271 HIGD1AQ9Y241 93 aa9.28□□□□□ -0.92
RHO-201ENST00000296271 SLAQ13239 276 aa9.28□□□□□ -0.92
RHO-201ENST00000296271 C5orf64Q2M2E5 130 aa9.28□□□□□ -0.92
RHO-201ENST00000296271 TDRG1Q3Y452 100 aa9.28□□□□□ -0.92
RHO-201ENST00000296271 DTX2Q86UW9 622 aa9.28□□□□□ -0.92
RHO-201ENST00000296271 ITLN2Q8WWU7 325 aaPredicted RBP9.28□□□□□ -0.92
RHO-201ENST00000296271 TMEM18Q96B42 140 aa9.28□□□□□ -0.92
RHO-201ENST00000296271 FANCD2OSQ96PS1 177 aa9.28□□□□□ -0.92
RHO-201ENST00000296271 BPESC1Q9GZL8 116 aa9.28□□□□□ -0.92
RHO-201ENST00000296271 ZANQ9Y493 2812 aa9.27□□□□□ -0.92
RHO-201ENST00000296271 SMIM27A0A1W2PRY6 76 aa9.27□□□□□ -0.92
RHO-201ENST00000296271 IQCJQ1A5X6 159 aa9.27□□□□□ -0.92
RHO-201ENST00000296271 Q6ZWC4 215 aa9.27□□□□□ -0.92
RHO-201ENST00000296271 CIARTQ8N365 385 aaPredicted RBP9.27□□□□□ -0.92
RHO-201ENST00000296271 NEU4Q8WWR8 484 aaPredicted RBP9.27□□□□□ -0.92
RHO-201ENST00000296271 LINC01548A6NM66 108 aa9.27□□□□□ -0.93
RHO-201ENST00000296271 IL4P05112 153 aa9.27□□□□□ -0.93
RHO-201ENST00000296271 UBE2G1P62253 170 aa9.27□□□□□ -0.93
RHO-201ENST00000296271 NUP35Q8NFH5 326 aa9.27□□□□□ -0.93
RHO-201ENST00000296271 CMTM2Q8TAZ6 248 aa9.27□□□□□ -0.93
RHO-201ENST00000296271 F8W735 103 aaPredicted RBP9.26□□□□□ -0.93
RHO-201ENST00000296271 BMPR1BO00238 502 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 NDUFA3O95167 84 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 CAMPP49913 170 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 TAS2R60P59551 318 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 USF2Q15853 346 aaPredicted RBP9.26□□□□□ -0.93
RHO-201ENST00000296271 BAGE3Q86Y29 109 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 SVIPQ8NHG7 77 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 MBD6Q96DN6 1003 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 HSPB9Q9BQS6 159 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 PRORYQ9H606 182 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.26□□□□□ -0.93
RHO-201ENST00000296271 M0R1W7 72 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 M0R3E3 92 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 GATCO43716 136 aaKnown RBP9.26□□□□□ -0.93
RHO-201ENST00000296271 OR2J3O76001 311 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 NDUFB8O95169 186 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 SCGB1D1O95968 90 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 TCRAP04437 139 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 SRIP30626 198 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 TMEM183BQ1AE95 376 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 GOLT1AQ6ZVE7 132 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 ZNF491Q8N8L2 437 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 NPBQ8NG41 125 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 AJUBAQ96IF1 538 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 NEU1Q99519 415 aa9.26□□□□□ -0.93
RHO-201ENST00000296271 MRPL27Q9P0M9 148 aaKnown RBP9.26□□□□□ -0.93
RHO-201ENST00000296271 ZNF785A8K8V0 405 aa9.25□□□□□ -0.93
RHO-201ENST00000296271 HIGD1CA8MV81 97 aa9.25□□□□□ -0.93
RHO-201ENST00000296271 FCGR2BP31994 310 aaPredicted RBP9.25□□□□□ -0.93
RHO-201ENST00000296271 PAX2Q02962 417 aa9.25□□□□□ -0.93
RHO-201ENST00000296271 IGFL4Q6B9Z1 124 aa9.25□□□□□ -0.93
RHO-201ENST00000296271 C14orf144Q96I85 54 aa9.25□□□□□ -0.93
RHO-201ENST00000296271 MS4A10Q96PG2 267 aa9.25□□□□□ -0.93
RHO-201ENST00000296271 CSPG4Q6UVK1 2322 aa9.25□□□□□ -0.93
RHO-201ENST00000296271 OR2T8A6NH00 312 aa9.25□□□□□ -0.93
RHO-201ENST00000296271 EGR2P11161 476 aaPredicted RBP9.25□□□□□ -0.93
RHO-201ENST00000296271 CEACAM3P40198 252 aa9.25□□□□□ -0.93
RHO-201ENST00000296271 PLP1P60201 277 aa9.25□□□□□ -0.93
RHO-201ENST00000296271 FAM19A2Q8N3H0 131 aa9.25□□□□□ -0.93
RHO-201ENST00000296271 ARPC1AQ92747 370 aa9.25□□□□□ -0.93
RHO-201ENST00000296271 TBX15Q96SF7 602 aa9.25□□□□□ -0.93
RHO-201ENST00000296271 GNB1LQ9BYB4 327 aa9.25□□□□□ -0.93
RHO-201ENST00000296271 SIRPDQ9H106 197 aa9.25□□□□□ -0.93
RHO-201ENST00000296271 SOX21Q9Y651 276 aaPredicted RBP9.25□□□□□ -0.93
RHO-201ENST00000296271 DDTP30046 118 aa9.24□□□□□ -0.93
RHO-201ENST00000296271 PRNTQ86SH4 94 aa9.24□□□□□ -0.93
RHO-201ENST00000296271 OR5R1Q8NH85 324 aa9.24□□□□□ -0.93
RHO-201ENST00000296271 GTSF1Q8WW33 167 aa9.24□□□□□ -0.93
RHO-201ENST00000296271 MLST8Q9BVC4 326 aa9.24□□□□□ -0.93
RHO-201ENST00000296271 USP9YO00507 2555 aaPredicted RBP9.24□□□□□ -0.93
RHO-201ENST00000296271 IZUMO1RA6ND01 250 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms