RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 FGF11Q92914 225 aa9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 TCF20Q9UGU0 1960 aaKnown RBP9.82□□□□□ -0.84
SHROOM3-201ENST00000296043 EEF1AKMT3Q96AZ1 226 aa9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 TMEM158Q8WZ71 300 aa9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 MRPL27Q9P0M9 148 aaKnown RBP9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 MARF1Q9Y4F3 1742 aaKnown RBP9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 A0A1W2PR77 199 aa9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 SRFP11831 508 aa9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 HGFACQ04756 655 aa9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 ZNF474Q6S9Z5 364 aaPredicted RBP9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 COX14Q96I36 57 aa9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 ANAPC1Q9H1A4 1944 aa9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 IGHV2-5P01817 119 aa9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 CRYBA4P53673 196 aa9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 BHLHA9Q7RTU4 235 aa9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 PEBP1P30086 187 aaKnown RBP9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 LINC01590Q5TEZ4 76 aa9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 TMEM243Q9BU79 118 aa9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 FAM106AQ4KMX7 169 aa9.81□□□□□ -0.84
SHROOM3-201ENST00000296043 CDCP2Q5VXM1 449 aa9.8□□□□□ -0.84
SHROOM3-201ENST00000296043 DCTN5Q9BTE1 182 aa9.8□□□□□ -0.84
SHROOM3-201ENST00000296043 TM2D1Q9BX74 207 aa9.8□□□□□ -0.84
SHROOM3-201ENST00000296043 PAX1P15863 534 aa9.8□□□□□ -0.84
SHROOM3-201ENST00000296043 IGKV2-40A0A087WW87 121 aaPredicted RBP9.8□□□□□ -0.84
SHROOM3-201ENST00000296043 IGKV2D-40P01614 121 aaPredicted RBP9.8□□□□□ -0.84
SHROOM3-201ENST00000296043 SYNJ2BPP57105 145 aa9.8□□□□□ -0.84
SHROOM3-201ENST00000296043 IGHV1OR21-1A0A087WYE8 117 aa9.8□□□□□ -0.84
SHROOM3-201ENST00000296043 ANKRD29Q8N6D5 301 aa9.8□□□□□ -0.84
SHROOM3-201ENST00000296043 SONP18583 2426 aaKnown RBP9.8□□□□□ -0.84
SHROOM3-201ENST00000296043 CDK2AP2O75956 126 aa9.8□□□□□ -0.84
SHROOM3-201ENST00000296043 INAFM2P0DMQ5 153 aa9.8□□□□□ -0.84
SHROOM3-201ENST00000296043 IGKV1-8A0A0C4DH67 115 aa9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 CT55Q8WUE5 264 aa9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 PSG8Q9UQ74 426 aa9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 JPT1Q9UK76 154 aa9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 LYZL1Q6UWQ5 148 aa9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 LINC01587Q99440 93 aa9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 ALPK3Q96L96 1907 aa9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 APOBEC4Q8WW27 367 aaKnown RBP9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 TIMM21Q9BVV7 248 aa9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 AMN1Q8IY45 258 aa9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 EXOC3-AS1Q8N2X6 119 aa9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 POU2AF1Q16633 256 aa9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 TMEM196Q5HYL7 178 aa9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 GFI1Q99684 422 aa9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 TECTAO75443 2155 aa9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 PAPPAQ13219 1627 aa9.79□□□□□ -0.84
SHROOM3-201ENST00000296043 C12orf77C9JDV5 145 aa9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 INS-IGF2F8WCM5 200 aa9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 INSP01308 110 aa9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 TCRAP04437 139 aa9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 A0A0U1RQV1 116 aa9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 LINC01559Q495D7 138 aa9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 TEX43Q6ZNM6 134 aa9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 IGHV3-73A0A0B4J1V6 119 aa9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 CELA2AP08217 269 aa9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 PTGDSP41222 190 aa9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 HERV-K104P63124 156 aa9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 IGHV2-26A0A0B4J1V2 119 aa9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 DUX4L9Q6RFH8 374 aaPredicted RBP9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 LINC01549A6NIU2 74 aa9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 RBMY1FQ15415 496 aaKnown RBP9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 LY6EQ16553 131 aa9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 SCARF2Q96GP6 870 aaPredicted RBP9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 CEND1Q8N111 149 aa9.78□□□□□ -0.84
SHROOM3-201ENST00000296043 IGKV1D-8A0A087WSZ0 117 aa9.77□□□□□ -0.84
SHROOM3-201ENST00000296043 FABP5P3A8MUU1 101 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 SOCS3O14543 225 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 IL9P15248 144 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 TRAV40A0A0B4J280 105 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 CLPSL1A2RUU4 121 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 CD24P25063 80 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 FAM214BQ7L5A3 538 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 CACNG8Q8WXS5 425 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 IGHG4P01861 327 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 MST1LQ2TV78 715 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 GHRHP01286 108 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 GAS1P54826 345 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 BRK1Q8WUW1 75 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 PPP1R32Q7Z5V6 425 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 OR9G1Q8NH87 305 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 SRXN1Q9BYN0 137 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 TEX48A0A1B0GUV7 120 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 IGLL1P15814 213 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 COL9A1P20849 921 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 CARD19Q96LW7 228 aa9.77□□□□□ -0.85
SHROOM3-201ENST00000296043 IGHMP01871 453 aa9.76□□□□□ -0.85
SHROOM3-201ENST00000296043 COX8AP10176 69 aa9.76□□□□□ -0.85
SHROOM3-201ENST00000296043 TCTEX1D4Q5JR98 221 aa9.76□□□□□ -0.85
SHROOM3-201ENST00000296043 C21orf62Q9NYP8 219 aa9.76□□□□□ -0.85
SHROOM3-201ENST00000296043 A0A0A6YYD4 124 aa9.76□□□□□ -0.85
SHROOM3-201ENST00000296043 DRD3P35462 400 aa9.76□□□□□ -0.85
SHROOM3-201ENST00000296043 SH2D6Q7Z4S9 175 aa9.76□□□□□ -0.85
SHROOM3-201ENST00000296043 SIGLEC12Q96PQ1 595 aa9.76□□□□□ -0.85
SHROOM3-201ENST00000296043 ZNRF1Q8ND25 227 aa9.76□□□□□ -0.85
SHROOM3-201ENST00000296043 TRGV3P03979 118 aa9.76□□□□□ -0.85
SHROOM3-201ENST00000296043 IGHV2-70DA0A0C4DH43 119 aa9.76□□□□□ -0.85
SHROOM3-201ENST00000296043 PRSS29PA6NIE9 313 aa9.76□□□□□ -0.85
SHROOM3-201ENST00000296043 IGFBP3P17936 291 aaPredicted RBP9.76□□□□□ -0.85
SHROOM3-201ENST00000296043 COL16A1Q07092 1604 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms