RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 NCBP2LA6PVI3 153 aaKnown RBP12.56□□□□□ -0.4
NCKIPSD-201ENST00000294129 CAMPP49913 170 aa12.56□□□□□ -0.4
NCKIPSD-201ENST00000294129 TMEM136Q6ZRR5 245 aa12.56□□□□□ -0.4
NCKIPSD-201ENST00000294129 HIGD1AQ9Y241 93 aa12.56□□□□□ -0.4
NCKIPSD-201ENST00000294129 TRAV9-1A0A075B6T8 112 aa12.55□□□□□ -0.4
NCKIPSD-201ENST00000294129 SRIP30626 198 aa12.55□□□□□ -0.4
NCKIPSD-201ENST00000294129 UCNP55089 124 aa12.55□□□□□ -0.4
NCKIPSD-201ENST00000294129 Q6ZWC4 215 aa12.55□□□□□ -0.4
NCKIPSD-201ENST00000294129 EXOC3-AS1Q8N2X6 119 aa12.55□□□□□ -0.4
NCKIPSD-201ENST00000294129 CELSR1Q9NYQ6 3014 aa12.55□□□□□ -0.4
NCKIPSD-201ENST00000294129 IGLC1P0CG04 106 aa12.55□□□□□ -0.4
NCKIPSD-201ENST00000294129 Q9H3A6 140 aa12.55□□□□□ -0.4
NCKIPSD-201ENST00000294129 ZNF331Q9NQX6 463 aaPredicted RBP12.55□□□□□ -0.4
NCKIPSD-201ENST00000294129 KIR2DL5BA0A0G2JN68 375 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 KIR2DL5BA0A0G2JPC4 375 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 LY6LH3BQJ8 138 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 PMCHP20382 165 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 KIR2DL5AQ8N109 375 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 TMEM68Q96MH6 324 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 SSBP4Q9BWG4 385 aaPredicted RBP12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 GNB1LQ9BYB4 327 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 IGHV3-23P01764 117 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 TPPP2P59282 170 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 RPL19P84098 196 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 Q71RC1 249 aaPredicted RBP12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 RCHY1Q96PM5 261 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 A0A1W2PPR1 153 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 SMIM27A0A1W2PRY6 76 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 NBR2O15453 112 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 ZNF253O75346 499 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 AMY1AP04745 511 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 GP9P14770 177 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 ZNF25P17030 456 aaPredicted RBP12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 C8orf46Q8TAG6 207 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 RBM14Q96PK6 669 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 PAM16Q9Y3D7 125 aa12.54□□□□□ -0.4
NCKIPSD-201ENST00000294129 I3L2K1 104 aa12.53□□□□□ -0.4
NCKIPSD-201ENST00000294129 GPR6P46095 362 aaPredicted RBP12.53□□□□□ -0.4
NCKIPSD-201ENST00000294129 TCF24Q7RTU0 167 aa12.53□□□□□ -0.4
NCKIPSD-201ENST00000294129 STXBP6Q8NFX7 210 aa12.53□□□□□ -0.4
NCKIPSD-201ENST00000294129 A6NNC1 897 aa12.53□□□□□ -0.4
NCKIPSD-201ENST00000294129 RAB4AP20338 218 aa12.53□□□□□ -0.4
NCKIPSD-201ENST00000294129 SLAQ13239 276 aa12.53□□□□□ -0.4
NCKIPSD-201ENST00000294129 WDR73Q6P4I2 378 aa12.53□□□□□ -0.4
NCKIPSD-201ENST00000294129 VN1R17PQ8TDU5 208 aa12.53□□□□□ -0.4
NCKIPSD-201ENST00000294129 SLC25A39Q9BZJ4 359 aaPredicted RBP12.53□□□□□ -0.4
NCKIPSD-201ENST00000294129 UBTD1Q9HAC8 227 aa12.53□□□□□ -0.4
NCKIPSD-201ENST00000294129 HIGD1CA8MV81 97 aa12.52□□□□□ -0.4
NCKIPSD-201ENST00000294129 IGKV1-17P01599 117 aa12.52□□□□□ -0.4
NCKIPSD-201ENST00000294129 LINC00322Q6ZN03 302 aaPredicted RBP12.52□□□□□ -0.4
NCKIPSD-201ENST00000294129 LY6G5BQ8NDX9 201 aa12.52□□□□□ -0.4
NCKIPSD-201ENST00000294129 NUP35Q8NFH5 326 aa12.52□□□□□ -0.4
NCKIPSD-201ENST00000294129 C17orf77Q96MU5 243 aa12.52□□□□□ -0.4
NCKIPSD-201ENST00000294129 ZFHX3Q15911 3703 aa12.52□□□□□ -0.41
NCKIPSD-201ENST00000294129 BMPR1BO00238 502 aa12.52□□□□□ -0.41
NCKIPSD-201ENST00000294129 APCSP02743 223 aa12.52□□□□□ -0.41
NCKIPSD-201ENST00000294129 DYNAPQ8N1N2 210 aa12.52□□□□□ -0.41
NCKIPSD-201ENST00000294129 IZUMO1RA6ND01 250 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 MYCNOSP40205 109 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 KRTDAPP60985 99 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 TMEM183BQ1AE95 376 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 BCL6BQ8N143 479 aaPredicted RBP12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 FAM19A2Q8N3H0 131 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 ZNF586Q9NXT0 402 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 K7EIM0 57 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 IL4P05112 153 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 NTF3P20783 257 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 AMTP48728 403 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 GOLT1AQ6ZVE7 132 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 VMO1Q7Z5L0 202 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 PKD1L2Q7Z442 2459 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 VPS13CQ709C8 3753 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 IGHV3OR16-8A0A075B7F1 116 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 TRBV9A0A0B4J1U6 114 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 ZFP36P26651 326 aaKnown RBP12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 CEACAM3P40198 252 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 BATFQ16520 125 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 PRNTQ86SH4 94 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 SIGLECL1Q8N7X8 197 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 OR2D3Q8NGH3 330 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 RNF114Q9Y508 228 aa12.51□□□□□ -0.41
NCKIPSD-201ENST00000294129 IGHV3-35A0A0C4DH35 117 aa12.5□□□□□ -0.41
NCKIPSD-201ENST00000294129 C5orf17Q8NAS9 161 aa12.5□□□□□ -0.41
NCKIPSD-201ENST00000294129 CFHR4Q92496 578 aa12.5□□□□□ -0.41
NCKIPSD-201ENST00000294129 LPAR2Q9HBW0 351 aa12.5□□□□□ -0.41
NCKIPSD-201ENST00000294129 PIEZO1Q92508 2521 aa12.5□□□□□ -0.41
NCKIPSD-201ENST00000294129 MT-ND6P03923 174 aa12.5□□□□□ -0.41
NCKIPSD-201ENST00000294129 TCRAP04437 139 aa12.5□□□□□ -0.41
NCKIPSD-201ENST00000294129 GDF5OSQ5U4N7 250 aa12.5□□□□□ -0.41
NCKIPSD-201ENST00000294129 PVRIGQ6DKI7 326 aa12.5□□□□□ -0.41
NCKIPSD-201ENST00000294129 C11orf71Q6IPW1 123 aa12.5□□□□□ -0.41
NCKIPSD-201ENST00000294129 CIARTQ8N365 385 aaPredicted RBP12.5□□□□□ -0.41
NCKIPSD-201ENST00000294129 GPR82Q96P67 336 aa12.5□□□□□ -0.41
NCKIPSD-201ENST00000294129 HLA-DQA1P01909 254 aa12.49□□□□□ -0.41
NCKIPSD-201ENST00000294129 HIST1H1EP10412 219 aaKnown RBP12.49□□□□□ -0.41
NCKIPSD-201ENST00000294129 PAFAH1B2P68402 229 aa12.49□□□□□ -0.41
NCKIPSD-201ENST00000294129 GRAMD2BQ96HH9 432 aa12.49□□□□□ -0.41
NCKIPSD-201ENST00000294129 FCGR2BP31994 310 aaPredicted RBP12.49□□□□□ -0.41
NCKIPSD-201ENST00000294129 BRS3P32247 399 aa12.49□□□□□ -0.41
NCKIPSD-201ENST00000294129 NDPQ00604 133 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms