RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 FGL1Q08830 312 aa20.08■□□□□ 0.81
SSU72-201ENST00000291386 PXDC1Q5TGL8 231 aa20.08■□□□□ 0.81
SSU72-201ENST00000291386 OR5C1Q8NGR4 320 aa20.08■□□□□ 0.81
SSU72-201ENST00000291386 THAP6Q8TBB0 222 aa20.08■□□□□ 0.81
SSU72-201ENST00000291386 MS4A6AQ9H2W1 248 aa20.08■□□□□ 0.81
SSU72-201ENST00000291386 OR11H12B2RN74 326 aa20.07■□□□□ 0.8
SSU72-201ENST00000291386 LINC00869P0C866 280 aa20.07■□□□□ 0.8
SSU72-201ENST00000291386 S100A7P31151 101 aa20.07■□□□□ 0.8
SSU72-201ENST00000291386 RAP2BP61225 183 aa20.07■□□□□ 0.8
SSU72-201ENST00000291386 RAB31Q13636 194 aa20.07■□□□□ 0.8
SSU72-201ENST00000291386 FRMD6-AS1P0C7T7 363 aa20.06■□□□□ 0.8
SSU72-201ENST00000291386 ORM2P19652 201 aa20.06■□□□□ 0.8
SSU72-201ENST00000291386 RPL12P30050 165 aaKnown RBP20.06■□□□□ 0.8
SSU72-201ENST00000291386 CAMLGP49069 296 aa20.06■□□□□ 0.8
SSU72-201ENST00000291386 CMC4P56277 68 aaPredicted RBP20.06■□□□□ 0.8
SSU72-201ENST00000291386 FBXL17Q9UF56 701 aa20.06■□□□□ 0.8
SSU72-201ENST00000291386 HSPB11Q9Y547 144 aa20.06■□□□□ 0.8
SSU72-201ENST00000291386 IGKV3-7A0A075B6H7 116 aa20.05■□□□□ 0.8
SSU72-201ENST00000291386 UBE2L5PA0A1B0GUS4 154 aa20.05■□□□□ 0.8
SSU72-201ENST00000291386 MPDU1O75352 247 aa20.05■□□□□ 0.8
SSU72-201ENST00000291386 RPL11P62913 178 aaKnown RBP20.05■□□□□ 0.8
SSU72-201ENST00000291386 ODF3L2Q3SX64 289 aa20.05■□□□□ 0.8
SSU72-201ENST00000291386 GBGT1Q8N5D6 347 aa20.05■□□□□ 0.8
SSU72-201ENST00000291386 DEFB125Q8N687 156 aa20.05■□□□□ 0.8
SSU72-201ENST00000291386 OR1B1Q8NGR6 318 aa20.05■□□□□ 0.8
SSU72-201ENST00000291386 DNASE2O00115 360 aaPredicted RBP20.04■□□□□ 0.8
SSU72-201ENST00000291386 HYPMO75409 117 aa20.04■□□□□ 0.8
SSU72-201ENST00000291386 SIGLEC15Q6ZMC9 328 aa20.04■□□□□ 0.8
SSU72-201ENST00000291386 GGTLC1Q9BX51 225 aa20.04■□□□□ 0.8
SSU72-201ENST00000291386 WFDC10AQ9H1F0 79 aa20.04■□□□□ 0.8
SSU72-201ENST00000291386 K7EQG2 157 aa20.03■□□□□ 0.8
SSU72-201ENST00000291386 TFPI2P48307 235 aa20.03■□□□□ 0.8
SSU72-201ENST00000291386 LINC00322Q6ZN03 302 aaPredicted RBP20.03■□□□□ 0.8
SSU72-201ENST00000291386 PPP1R14BQ96C90 147 aa20.03■□□□□ 0.8
SSU72-201ENST00000291386 DNAH9Q9NYC9 4486 aa20.02■□□□□ 0.8
SSU72-201ENST00000291386 ZNF98A6NK75 572 aa20.02■□□□□ 0.8
SSU72-201ENST00000291386 RPL29P47914 159 aaKnown RBP20.02■□□□□ 0.8
SSU72-201ENST00000291386 PRR20EP86478 221 aa20.02■□□□□ 0.8
SSU72-201ENST00000291386 PRR20CP86479 221 aa20.02■□□□□ 0.8
SSU72-201ENST00000291386 PRR20DP86480 221 aa20.02■□□□□ 0.8
SSU72-201ENST00000291386 PRR20BP86481 221 aa20.02■□□□□ 0.8
SSU72-201ENST00000291386 PRR20AP86496 221 aa20.02■□□□□ 0.8
SSU72-201ENST00000291386 OPCMLQ14982 345 aa20.02■□□□□ 0.8
SSU72-201ENST00000291386 S100A7AQ86SG5 101 aa20.02■□□□□ 0.8
SSU72-201ENST00000291386 STXBP6Q8NFX7 210 aa20.02■□□□□ 0.8
SSU72-201ENST00000291386 DCANP1Q8TF63 244 aa20.02■□□□□ 0.8
SSU72-201ENST00000291386 TUBA4BQ9H853 241 aa20.02■□□□□ 0.8
SSU72-201ENST00000291386 HIGD1AQ9Y241 93 aa20.02■□□□□ 0.8
SSU72-201ENST00000291386 H3BRN7 92 aa20.01■□□□□ 0.79
SSU72-201ENST00000291386 FGF7P21781 194 aa20.01■□□□□ 0.79
SSU72-201ENST00000291386 CLINT1Q14677 625 aa20.01■□□□□ 0.79
SSU72-201ENST00000291386 Q5BKY6 102 aa20.01■□□□□ 0.79
SSU72-201ENST00000291386 PATE2Q6UY27 113 aa20.01■□□□□ 0.79
SSU72-201ENST00000291386 ATP5SQ99766 215 aa20.01■□□□□ 0.79
SSU72-201ENST00000291386 SHANK2-AS3Q9BTD1 123 aa20.01■□□□□ 0.79
SSU72-201ENST00000291386 SLC25A39Q9BZJ4 359 aaPredicted RBP20.01■□□□□ 0.79
SSU72-201ENST00000291386 ARL6Q9H0F7 186 aa20.01■□□□□ 0.79
SSU72-201ENST00000291386 SRD5A3Q9H8P0 318 aa20.01■□□□□ 0.79
SSU72-201ENST00000291386 DOK5Q9P104 306 aa20.01■□□□□ 0.79
SSU72-201ENST00000291386 WFDC3Q8IUB2 231 aa20■□□□□ 0.79
SSU72-201ENST00000291386 OR8I2Q8N0Y5 310 aa20■□□□□ 0.79
SSU72-201ENST00000291386 ARV1Q9H2C2 271 aa20■□□□□ 0.79
SSU72-201ENST00000291386 SEPSECSQ9HD40 501 aaKnown RBP20■□□□□ 0.79
SSU72-201ENST00000291386 NRN1Q9NPD7 142 aa20■□□□□ 0.79
SSU72-201ENST00000291386 UBQLN2Q9UHD9 624 aa20■□□□□ 0.79
SSU72-201ENST00000291386 OR5G3P0C626 314 aa19.99■□□□□ 0.79
SSU72-201ENST00000291386 MIC13Q5XKP0 118 aa19.99■□□□□ 0.79
SSU72-201ENST00000291386 Q6ZRG5 221 aa19.99■□□□□ 0.79
SSU72-201ENST00000291386 GPR82Q96P67 336 aa19.99■□□□□ 0.79
SSU72-201ENST00000291386 CITED4Q96RK1 184 aa19.99■□□□□ 0.79
SSU72-201ENST00000291386 NPCDR1Q9BY65 106 aa19.99■□□□□ 0.79
SSU72-201ENST00000291386 WDR61Q9GZS3 305 aaKnown RBP19.99■□□□□ 0.79
SSU72-201ENST00000291386 MAP6D1Q9H9H5 199 aa19.99■□□□□ 0.79
SSU72-201ENST00000291386 ELOA3CA0A087WX78 387 aaPredicted RBP19.98■□□□□ 0.79
SSU72-201ENST00000291386 NHLRC4P0CG21 123 aaPredicted RBP19.98■□□□□ 0.79
SSU72-201ENST00000291386 SBSPONQ8IVN8 264 aa19.98■□□□□ 0.79
SSU72-201ENST00000291386 OR2T35Q8NGX2 323 aa19.98■□□□□ 0.79
SSU72-201ENST00000291386 AQP10Q96PS8 301 aa19.98■□□□□ 0.79
SSU72-201ENST00000291386 RNF24Q9Y225 148 aa19.98■□□□□ 0.79
SSU72-201ENST00000291386 FAM24BQ8N5W8 94 aa19.97■□□□□ 0.79
SSU72-201ENST00000291386 TMEM37Q8WXS4 190 aa19.97■□□□□ 0.79
SSU72-201ENST00000291386 SLC25A32Q9H2D1 315 aa19.97■□□□□ 0.79
SSU72-201ENST00000291386 SLC39A9Q9NUM3 307 aa19.97■□□□□ 0.79
SSU72-201ENST00000291386 RBMY1BA6NDE4 496 aaKnown RBP19.96■□□□□ 0.79
SSU72-201ENST00000291386 RBMY1EA6NEQ0 496 aaKnown RBP19.96■□□□□ 0.79
SSU72-201ENST00000291386 RBMY1DP0C7P1 496 aaKnown RBP19.96■□□□□ 0.79
SSU72-201ENST00000291386 B2MP61769 119 aa19.96■□□□□ 0.79
SSU72-201ENST00000291386 UHRF2Q96PU4 802 aa19.96■□□□□ 0.79
SSU72-201ENST00000291386 SCRT1Q9BWW7 348 aa19.96■□□□□ 0.79
SSU72-201ENST00000291386 PARD6GQ9BYG4 376 aaPredicted RBP19.96■□□□□ 0.79
SSU72-201ENST00000291386 SLC25A22Q9H936 323 aa19.96■□□□□ 0.79
SSU72-201ENST00000291386 TGP01266 2768 aa19.96■□□□□ 0.79
SSU72-201ENST00000291386 G3V3Q6 166 aa19.95■□□□□ 0.78
SSU72-201ENST00000291386 GALR1P47211 349 aa19.95■□□□□ 0.78
SSU72-201ENST00000291386 OR1L4Q8NGR5 311 aa19.95■□□□□ 0.78
SSU72-201ENST00000291386 DNAJC4Q9NNZ3 241 aa19.95■□□□□ 0.78
SSU72-201ENST00000291386 PXMP4Q9Y6I8 212 aa19.95■□□□□ 0.78
SSU72-201ENST00000291386 COX7A2P2O60397 106 aa19.94■□□□□ 0.78
SSU72-201ENST00000291386 Q6ZNX1 250 aa19.94■□□□□ 0.78
SSU72-201ENST00000291386 LINC00305Q7Z4B0 112 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms