RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 IAPPP10997 89 aa10.1□□□□□ -0.79
TPM1-202ENST00000288398 GALR1P47211 349 aa10.1□□□□□ -0.79
TPM1-202ENST00000288398 PYDC2Q56P42 97 aa10.1□□□□□ -0.79
TPM1-202ENST00000288398 GGNBP1Q5YKI7 109 aa10.1□□□□□ -0.79
TPM1-202ENST00000288398 TOMM5Q8N4H5 51 aa10.1□□□□□ -0.79
TPM1-202ENST00000288398 POM121L12Q8N7R1 296 aa10.1□□□□□ -0.79
TPM1-202ENST00000288398 MCFD2Q8NI22 146 aa10.1□□□□□ -0.79
TPM1-202ENST00000288398 C16orf92Q96LL3 132 aa10.1□□□□□ -0.79
TPM1-202ENST00000288398 TMEM208Q9BTX3 173 aa10.1□□□□□ -0.79
TPM1-202ENST00000288398 RPRMQ9NS64 109 aa10.1□□□□□ -0.79
TPM1-202ENST00000288398 HBE1P02100 147 aa10.09□□□□□ -0.79
TPM1-202ENST00000288398 TNFSF8P32971 234 aa10.09□□□□□ -0.79
TPM1-202ENST00000288398 PSG9Q00887 426 aa10.09□□□□□ -0.79
TPM1-202ENST00000288398 TMEM128Q5BJH2 165 aa10.09□□□□□ -0.79
TPM1-202ENST00000288398 GDF5OSQ5U4N7 250 aa10.09□□□□□ -0.79
TPM1-202ENST00000288398 ZNF705AQ6ZN79 300 aaPredicted RBP10.09□□□□□ -0.79
TPM1-202ENST00000288398 TRGV9Q99603 122 aa10.09□□□□□ -0.79
TPM1-202ENST00000288398 WDR12Q9GZL7 423 aaKnown RBP10.09□□□□□ -0.79
TPM1-202ENST00000288398 BATF3Q9NR55 127 aa10.09□□□□□ -0.79
TPM1-202ENST00000288398 ZNF705FA8MVS1 300 aaPredicted RBP10.08□□□□□ -0.8
TPM1-202ENST00000288398 ZNF705DP0CH99 300 aaPredicted RBP10.08□□□□□ -0.8
TPM1-202ENST00000288398 ZNF705BP0CI00 300 aaPredicted RBP10.08□□□□□ -0.8
TPM1-202ENST00000288398 HTN3P15516 51 aa10.08□□□□□ -0.8
TPM1-202ENST00000288398 AKR1C1Q04828 323 aa10.08□□□□□ -0.8
TPM1-202ENST00000288398 BPIFCQ8NFQ6 507 aa10.08□□□□□ -0.8
TPM1-202ENST00000288398 MAGT1Q9H0U3 335 aa10.08□□□□□ -0.8
TPM1-202ENST00000288398 SLC25A22Q9H936 323 aa10.08□□□□□ -0.8
TPM1-202ENST00000288398 IGKV1D-37A0A075B6S9 117 aa10.07□□□□□ -0.8
TPM1-202ENST00000288398 SLC25A6P12236 298 aa10.07□□□□□ -0.8
TPM1-202ENST00000288398 DEFB1P60022 68 aa10.07□□□□□ -0.8
TPM1-202ENST00000288398 FAM78BQ5VT40 261 aa10.07□□□□□ -0.8
TPM1-202ENST00000288398 FAM210BQ96KR6 192 aa10.07□□□□□ -0.8
TPM1-202ENST00000288398 CLUHP3Q96NS8 147 aa10.07□□□□□ -0.8
TPM1-202ENST00000288398 SLC25A21Q9BQT8 299 aaPredicted RBP10.07□□□□□ -0.8
TPM1-202ENST00000288398 NIPSNAP3BQ9BS92 247 aa10.07□□□□□ -0.8
TPM1-202ENST00000288398 TMEM147Q9BVK8 224 aa10.07□□□□□ -0.8
TPM1-202ENST00000288398 TMED3Q9Y3Q3 217 aa10.07□□□□□ -0.8
TPM1-202ENST00000288398 LOC102723971A0A1B0GUV8 181 aa10.06□□□□□ -0.8
TPM1-202ENST00000288398 M0R2N4 97 aa10.06□□□□□ -0.8
TPM1-202ENST00000288398 WRBO00258 174 aa10.06□□□□□ -0.8
TPM1-202ENST00000288398 SYNGR2O43760 224 aa10.06□□□□□ -0.8
TPM1-202ENST00000288398 ORM2P19652 201 aa10.06□□□□□ -0.8
TPM1-202ENST00000288398 S100A5P33763 92 aa10.06□□□□□ -0.8
TPM1-202ENST00000288398 RRN3P1Q2M238 152 aa10.06□□□□□ -0.8
TPM1-202ENST00000288398 FAM222AQ5U5X8 452 aa10.06□□□□□ -0.8
TPM1-202ENST00000288398 OR1B1Q8NGR6 318 aa10.06□□□□□ -0.8
TPM1-202ENST00000288398 GPR82Q96P67 336 aa10.06□□□□□ -0.8
TPM1-202ENST00000288398 SLIRPQ9GZT3 109 aaKnown RBP10.06□□□□□ -0.8
TPM1-202ENST00000288398 SLC35B3Q9H1N7 401 aa10.06□□□□□ -0.8
TPM1-202ENST00000288398 DOK5Q9P104 306 aa10.06□□□□□ -0.8
TPM1-202ENST00000288398 SLC45A2Q9UMX9 530 aa10.06□□□□□ -0.8
TPM1-202ENST00000288398 DNAH10Q8IVF4 4471 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 SMCO3A2RU48 225 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 CCDC160A6NGH7 325 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 F6UB75 175 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 H3BMQ9 156 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 SOCS3O14543 225 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 PITX3O75364 302 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 HOXB5P09067 269 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 INPP1P49441 399 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 PAX9P55771 341 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 ZNF79Q15937 498 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 SOHLH1Q5JUK2 328 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 SPANXN5Q5MJ07 72 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 S100A7AQ86SG5 101 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 ZNF709Q8N972 641 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 THAP8Q8NA92 274 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 RSG1Q9BU20 258 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 DKK2Q9UBU2 259 aa10.05□□□□□ -0.8
TPM1-202ENST00000288398 STRAPQ9Y3F4 350 aaKnown RBP10.05□□□□□ -0.8
TPM1-202ENST00000288398 VPS13DQ5THJ4 4388 aa10.04□□□□□ -0.8
TPM1-202ENST00000288398 A0A0J9YX75 114 aa10.04□□□□□ -0.8
TPM1-202ENST00000288398 PRSS29PA6NIE9 313 aa10.04□□□□□ -0.8
TPM1-202ENST00000288398 DUSP14O95147 198 aaKnown RBP10.04□□□□□ -0.8
TPM1-202ENST00000288398 SFT2D2O95562 160 aa10.04□□□□□ -0.8
TPM1-202ENST00000288398 RAP2BP61225 183 aa10.04□□□□□ -0.8
TPM1-202ENST00000288398 DAD1P61803 113 aa10.04□□□□□ -0.8
TPM1-202ENST00000288398 FGL1Q08830 312 aa10.04□□□□□ -0.8
TPM1-202ENST00000288398 LRTM2Q8N967 370 aa10.04□□□□□ -0.8
TPM1-202ENST00000288398 DEDD2Q8WXF8 326 aa10.04□□□□□ -0.8
TPM1-202ENST00000288398 SLC25A32Q9H2D1 315 aa10.04□□□□□ -0.8
TPM1-202ENST00000288398 PPP1R14DQ9NXH3 145 aa10.04□□□□□ -0.8
TPM1-202ENST00000288398 YTHDF2Q9Y5A9 579 aaKnown RBP10.04□□□□□ -0.8
TPM1-202ENST00000288398 A6NHS1 94 aa10.03□□□□□ -0.8
TPM1-202ENST00000288398 ZNF98A6NK75 572 aa10.03□□□□□ -0.8
TPM1-202ENST00000288398 INSP01308 110 aa10.03□□□□□ -0.8
TPM1-202ENST00000288398 PPP1R1AQ13522 171 aa10.03□□□□□ -0.8
TPM1-202ENST00000288398 GSG1LQ6UXU4 331 aa10.03□□□□□ -0.8
TPM1-202ENST00000288398 OR4D5Q8NGN0 318 aa10.03□□□□□ -0.8
TPM1-202ENST00000288398 SOSTQ9BQB4 213 aa10.03□□□□□ -0.8
TPM1-202ENST00000288398 SCRT1Q9BWW7 348 aa10.03□□□□□ -0.8
TPM1-202ENST00000288398 IGKV1OR2-108A0A075B7D4 117 aa10.02□□□□□ -0.81
TPM1-202ENST00000288398 H3BP45 60 aa10.02□□□□□ -0.81
TPM1-202ENST00000288398 IL5P05113 134 aa10.02□□□□□ -0.81
TPM1-202ENST00000288398 OXA1LQ15070 435 aa10.02□□□□□ -0.81
TPM1-202ENST00000288398 LGALS9BQ3B8N2 356 aa10.02□□□□□ -0.81
TPM1-202ENST00000288398 ACOT7LQ6ZUV0 252 aa10.02□□□□□ -0.81
TPM1-202ENST00000288398 ZNF738Q8NE65 137 aa10.02□□□□□ -0.81
TPM1-202ENST00000288398 LRRC20Q8TCA0 184 aa10.02□□□□□ -0.81
TPM1-202ENST00000288398 TRIM63Q969Q1 353 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms