RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZNF726P1Q15940 193 aa10.33□□□□□ -0.76
SLC6A1-201ENST00000287766 MLANAQ16655 118 aa10.33□□□□□ -0.76
SLC6A1-201ENST00000287766 NUP37Q8NFH4 326 aa10.33□□□□□ -0.76
SLC6A1-201ENST00000287766 LYNX1G3V0Z9 82 aa10.33□□□□□ -0.76
SLC6A1-201ENST00000287766 IGKV1D-33P01593 117 aa10.33□□□□□ -0.76
SLC6A1-201ENST00000287766 IGKV1-33P01594 117 aa10.33□□□□□ -0.76
SLC6A1-201ENST00000287766 HBDP02042 147 aa10.33□□□□□ -0.76
SLC6A1-201ENST00000287766 PFN1P07737 140 aaKnown RBP10.33□□□□□ -0.76
SLC6A1-201ENST00000287766 LYNX1P0DP58 116 aa10.33□□□□□ -0.76
SLC6A1-201ENST00000287766 KIR3DS1Q14943 382 aa10.33□□□□□ -0.76
SLC6A1-201ENST00000287766 MRAP2Q96G30 205 aa10.33□□□□□ -0.76
SLC6A1-201ENST00000287766 MUC22E2RYF6 1773 aaPredicted RBP10.33□□□□□ -0.76
SLC6A1-201ENST00000287766 CUL9Q8IWT3 2517 aa10.33□□□□□ -0.76
SLC6A1-201ENST00000287766 TRAV8-1A0A0A6YYK1 113 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 A8MWV9 139 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 IGHV4-39P01824 125 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 ZFAND6Q6FIF0 208 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 TMEM144Q7Z5S9 345 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 C1orf122Q6ZSJ8 110 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 RAB1CQ92928 201 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 ADAMTS9Q9P2N4 1935 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 HOXA3O43365 443 aaPredicted RBP10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 FOXH1O75593 365 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 SAA1P0DJI8 122 aaPredicted RBP10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 PPIFP30405 207 aaKnown RBP10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 PSG3Q16557 428 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 SRSF7Q16629 238 aaKnown RBP eCLIP10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 HAPLN4Q86UW8 402 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 LINC01560Q8TB33 94 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 AGMATQ9BSE5 352 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 FBXL7Q9UJT9 491 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 A0A1B0GWJ7 208 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 CIRBPQ14011 172 aaKnown RBP10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 Q6ZS49 121 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 FAM90A1Q86YD7 464 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 RPRMLQ8N4K4 120 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 STPG4Q8N801 248 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 GGTLC1Q9BX51 225 aa10.32□□□□□ -0.76
SLC6A1-201ENST00000287766 LOC105371242A0A075B767 164 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 PPIAL4CA0A0B4J2A2 164 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 SPINK8P0C7L1 97 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 PPIAL4GP0DN37 164 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 BSPH1Q075Z2 132 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 OR10J6PQ8NGY7 276 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 MS4A6AQ9H2W1 248 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 TMEM131Q92545 1883 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 TRAV5A0A0B4J249 113 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 TMEM262E9PQX1 116 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 YPEL1O60688 119 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 UNQ6494/PRO21346Q6UXR6 183 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 GTSCR1Q86UQ5 136 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 YPEL2Q96QA6 119 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 Q9H3A6 140 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 GEMIN7Q9H840 131 aaKnown RBP10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 MUC6Q6W4X9 2439 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 F2RL2O00254 374 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 CD5LO43866 347 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 RNASEH2CQ8TDP1 164 aaKnown RBP10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 CITED1Q99966 193 aa10.31□□□□□ -0.76
SLC6A1-201ENST00000287766 IGKV1D-17A0A075B6S4 117 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 PSMB11A5LHX3 300 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 C15orf62A8K5M9 175 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 SRRM5B3KS81 715 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 IGLC2P0DOY2 106 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 IGLC3P0DOY3 106 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 PSG9Q00887 426 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 KIR3DL3Q8N743 410 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 EML5Q05BV3 1969 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 FAM231BA6NCW3 169 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 CD24P25063 80 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 MFAP4P55083 255 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 ETDBQ3ZM63 59 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 FER1L6-AS1Q8NA97 138 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 C1orf162Q8NEQ5 155 aaPredicted RBP10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 C2CD3Q4AC94 2353 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 PTPRQQ9UMZ3 2332 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 NPIPB6E9PJ23 425 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 SYS1-DBNDD2H3BUS1 97 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 CCL21O00585 134 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 ADAMTSL5Q6ZMM2 481 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 Q6ZR03 302 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 TSKUQ8WUA8 353 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 TRBV6-6A0A0A6YYG2 114 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 C15orf61A6NNL5 157 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 C9JCJ5 164 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 DPM2O94777 84 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 C19orf54Q5BKX5 351 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 OR13C6PQ8NH95 151 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 ABHD17AQ96GS6 310 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 MGST2Q99735 147 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 VCX2Q9H322 139 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 EPDR1Q9UM22 224 aa10.3□□□□□ -0.76
SLC6A1-201ENST00000287766 IGKV3OR2-268A0A0C4DH90 116 aa10.29□□□□□ -0.76
SLC6A1-201ENST00000287766 EVI2AP22794 236 aa10.29□□□□□ -0.76
SLC6A1-201ENST00000287766 DUX4L9Q6RFH8 374 aaPredicted RBP10.29□□□□□ -0.76
SLC6A1-201ENST00000287766 MRPS16Q9Y3D3 137 aaKnown RBP10.29□□□□□ -0.76
SLC6A1-201ENST00000287766 KLF2Q9Y5W3 355 aaPredicted RBP10.29□□□□□ -0.76
SLC6A1-201ENST00000287766 TRIOO75962 3097 aa10.29□□□□□ -0.76
SLC6A1-201ENST00000287766 CEACAM8P31997 349 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms