RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 TPRX1Q8N7U7 411 aa8.31□□□□□ -1.08
UPF3B-201ENST00000276201 URB1-AS1Q96HZ7 61 aa8.31□□□□□ -1.08
UPF3B-201ENST00000276201 DUSP13Q9UII6 198 aa8.31□□□□□ -1.08
UPF3B-201ENST00000276201 AMMECR1Q9Y4X0 333 aaPredicted RBP8.31□□□□□ -1.08
UPF3B-201ENST00000276201 DYSFO75923 2080 aa8.31□□□□□ -1.08
UPF3B-201ENST00000276201 CD5LO43866 347 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 TIMM8AO60220 97 aaPredicted RBP8.3□□□□□ -1.08
UPF3B-201ENST00000276201 TOX4O94842 621 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 C17orf58Q2M2W7 97 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 MAJINQ3KP22 176 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 CT45A1Q5HYN5 189 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 DTX2Q86UW9 622 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 THAP8Q8NA92 274 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 CT45A3Q8NHU0 189 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 FAM168AQ92567 244 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 PRSS22Q9GZN4 317 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 TRAV34A0A0B4J273 112 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 SYS1-DBNDD2H3BUS1 97 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 SAA2P0DJI9 122 aaPredicted RBP8.3□□□□□ -1.08
UPF3B-201ENST00000276201 Q56UQ5 140 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 BVES-AS1Q5T3Y7 98 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 SLC25A34Q6PIV7 304 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 C1orf229Q6ZS94 237 aaPredicted RBP8.3□□□□□ -1.08
UPF3B-201ENST00000276201 DPF1Q92782 380 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 NDFIP1Q9BT67 221 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 TMEM191AQ9H0A3 160 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 GCM1Q9NP62 436 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 MAP1AP78559 2803 aaPredicted RBP8.3□□□□□ -1.08
UPF3B-201ENST00000276201 ITPR3Q14573 2671 aa8.3□□□□□ -1.08
UPF3B-201ENST00000276201 TEX50A0A1B0GTY4 177 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 OR4C46A6NHA9 309 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 OVOL3O00110 214 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 FSTL3O95633 263 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 FABP6P51161 128 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 UBE2L3P68036 154 aaKnown RBP8.29□□□□□ -1.08
UPF3B-201ENST00000276201 HBBP68871 147 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 SLC35B1P78383 322 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 C11orf71Q6IPW1 123 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 KRTAP1-3Q8IUG1 177 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 STXBP6Q8NFX7 210 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 MLST8Q9BVC4 326 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 CELSR1Q9NYQ6 3014 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 KBTBD11-OT1A0A1B0GTJ5 212 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 LHBP01229 141 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 EDDM3AQ14507 147 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 RNASEKQ6P5S7 137 aaKnown RBP8.29□□□□□ -1.08
UPF3B-201ENST00000276201 SPATA12Q7Z6I5 190 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 ATOH7Q8N100 152 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 GATD1Q8NB37 220 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 NUP37Q8NFH4 326 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 PERPQ96FX8 193 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 PAXXQ9BUH6 204 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 SCRT2Q9NQ03 307 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 HIVEP1P15822 2718 aa8.29□□□□□ -1.08
UPF3B-201ENST00000276201 SRRM4A7MD48 611 aaKnown RBP8.28□□□□□ -1.08
UPF3B-201ENST00000276201 A8MWL6 223 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 C22orf46C9J442 243 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 BPIFB3P59826 476 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 RPL8P62917 257 aaKnown RBP8.28□□□□□ -1.08
UPF3B-201ENST00000276201 HIST1H1AQ02539 215 aaPredicted RBP8.28□□□□□ -1.08
UPF3B-201ENST00000276201 VAMP3Q15836 100 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 FAM71F2Q6NXP2 309 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 LRRC75A-AS1Q8N1F1 130 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 OR4A5Q8NH83 315 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 ZNF355PQ9NSJ1 428 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 F8P00451 2351 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 C19orf71A6NCJ1 209 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 TFF1P04155 84 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 LIPFP07098 398 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 APOBEC3AP31941 199 aaPredicted RBP8.28□□□□□ -1.08
UPF3B-201ENST00000276201 ADIPOQQ15848 244 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 LTC4SQ16873 150 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 VHLLQ6RSH7 139 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 OSR1Q8TAX0 266 aaPredicted RBP8.28□□□□□ -1.08
UPF3B-201ENST00000276201 FXYD5Q96DB9 178 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 FAM234AQ9H0X4 552 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 CST9LQ9H4G1 147 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 RPP21Q9H633 154 aaKnown RBP8.28□□□□□ -1.08
UPF3B-201ENST00000276201 NDUFA4L2Q9NRX3 87 aa8.28□□□□□ -1.08
UPF3B-201ENST00000276201 TRBV6-1A0A0K0K1D8 114 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 HIGD1CA8MV81 97 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 HSBP1L1C9JCN9 74 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 OCIAD2Q56VL3 154 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 OR9G1Q8NH87 305 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 GPR82Q96P67 336 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 SSBP3Q9BWW4 388 aaPredicted RBP8.27□□□□□ -1.09
UPF3B-201ENST00000276201 ZNF430Q9H8G1 570 aaPredicted RBP8.27□□□□□ -1.09
UPF3B-201ENST00000276201 EPDR1Q9UM22 224 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 IGHV1-24A0A0C4DH33 117 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 IGHV3-64DA0A0J9YX35 117 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 TCRBV4S1A1TA0A5B7 111 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 NPIPB6E9PJ23 425 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 CA1P00915 261 aaPredicted RBP8.27□□□□□ -1.09
UPF3B-201ENST00000276201 CEACAM3P40198 252 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 MSMPQ1L6U9 139 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 MPV17L2Q567V2 206 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 Q5PR19 223 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 C10orf113Q5VZT2 155 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 PVRIGQ6DKI7 326 aa8.27□□□□□ -1.09
UPF3B-201ENST00000276201 C16orf54Q6UWD8 224 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms