RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 AKR1C1Q04828 323 aa10.5□□□□□ -0.73
HMGN3-201ENST00000275036 TMEM14EPQ6UXP3 125 aa10.5□□□□□ -0.73
HMGN3-201ENST00000275036 LINC00476Q8WZB0 136 aa10.5□□□□□ -0.73
HMGN3-201ENST00000275036 C17orf77Q96MU5 243 aa10.5□□□□□ -0.73
HMGN3-201ENST00000275036 SEPSECSQ9HD40 501 aaKnown RBP10.5□□□□□ -0.73
HMGN3-201ENST00000275036 GSKIPQ9P0R6 139 aa10.5□□□□□ -0.73
HMGN3-201ENST00000275036 DEFB4AO15263 64 aa10.49□□□□□ -0.73
HMGN3-201ENST00000275036 MBPP02686 304 aaPredicted RBP10.49□□□□□ -0.73
HMGN3-201ENST00000275036 METTL15P1P0C7V9 234 aa10.49□□□□□ -0.73
HMGN3-201ENST00000275036 SPP1P10451 314 aa10.49□□□□□ -0.73
HMGN3-201ENST00000275036 SNRPD3P62318 126 aaKnown RBP10.49□□□□□ -0.73
HMGN3-201ENST00000275036 C1orf194Q5T5A4 169 aa10.49□□□□□ -0.73
HMGN3-201ENST00000275036 GDF5OSQ5U4N7 250 aa10.49□□□□□ -0.73
HMGN3-201ENST00000275036 MORN3Q6PF18 240 aaPredicted RBP10.49□□□□□ -0.73
HMGN3-201ENST00000275036 CEMP1Q6PRD7 247 aaPredicted RBP10.49□□□□□ -0.73
HMGN3-201ENST00000275036 LINC00299Q6ZSB3 139 aa10.49□□□□□ -0.73
HMGN3-201ENST00000275036 TMEM144Q7Z5S9 345 aa10.49□□□□□ -0.73
HMGN3-201ENST00000275036 C11orf68Q9H3H3 251 aaKnown RBP10.49□□□□□ -0.73
HMGN3-201ENST00000275036 CLEC5AQ9NY25 188 aa10.49□□□□□ -0.73
HMGN3-201ENST00000275036 VPS13DQ5THJ4 4388 aa10.48□□□□□ -0.73
HMGN3-201ENST00000275036 SMCO3A2RU48 225 aa10.48□□□□□ -0.73
HMGN3-201ENST00000275036 RRAS2P62070 204 aaPredicted RBP10.48□□□□□ -0.73
HMGN3-201ENST00000275036 ARL16Q0P5N6 197 aa10.48□□□□□ -0.73
HMGN3-201ENST00000275036 Q8NAQ8 132 aa10.48□□□□□ -0.73
HMGN3-201ENST00000275036 CSNK1G2-AS1Q8NCQ2 148 aa10.48□□□□□ -0.73
HMGN3-201ENST00000275036 ZNF431Q8TF32 576 aaPredicted RBP10.48□□□□□ -0.73
HMGN3-201ENST00000275036 PPP1R14BQ96C90 147 aa10.48□□□□□ -0.73
HMGN3-201ENST00000275036 SLC25A32Q9H2D1 315 aa10.48□□□□□ -0.73
HMGN3-201ENST00000275036 FBXL17Q9UF56 701 aa10.48□□□□□ -0.73
HMGN3-201ENST00000275036 PFDN2Q9UHV9 154 aa10.48□□□□□ -0.73
HMGN3-201ENST00000275036 FRAS1Q86XX4 4008 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 C7orf66A4D0T2 115 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 NUPR2A6NF83 97 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 ZNF98A6NK75 572 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 H3BMM0 161 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 CFDP00746 253 aaPredicted RBP10.47□□□□□ -0.73
HMGN3-201ENST00000275036 H2AFB2P0C5Z0 115 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 ORM2P19652 201 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 TAS2R30P59541 319 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 DLK1P80370 383 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 CYP2G1PQ6ZSU1 146 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 OR8I2Q8N0Y5 310 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 TMEM217Q8N7C4 229 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 BPIFCQ8NFQ6 507 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 S100ZQ8WXG8 99 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 SLC45A2Q9UMX9 530 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 X6R8D5 127 aa10.47□□□□□ -0.73
HMGN3-201ENST00000275036 FAM240BA0A1B0GVZ2 78 aa10.46□□□□□ -0.73
HMGN3-201ENST00000275036 ZNF705EA8MWA4 302 aaPredicted RBP10.46□□□□□ -0.73
HMGN3-201ENST00000275036 FAM25EA8MYX2 175 aa10.46□□□□□ -0.73
HMGN3-201ENST00000275036 TSC22D2O75157 780 aa10.46□□□□□ -0.73
HMGN3-201ENST00000275036 RBMY1A1P0DJD3 496 aaKnown RBP10.46□□□□□ -0.73
HMGN3-201ENST00000275036 RBMY1CP0DJD4 496 aa10.46□□□□□ -0.73
HMGN3-201ENST00000275036 HLA-DRB4P13762 266 aa10.46□□□□□ -0.73
HMGN3-201ENST00000275036 NANOS2P60321 138 aaKnown RBP10.46□□□□□ -0.73
HMGN3-201ENST00000275036 IFITM3Q01628 133 aa10.46□□□□□ -0.73
HMGN3-201ENST00000275036 ASAH1Q13510 395 aa10.46□□□□□ -0.73
HMGN3-201ENST00000275036 RBMY1FQ15415 496 aaKnown RBP10.46□□□□□ -0.73
HMGN3-201ENST00000275036 TMEM41BQ5BJD5 291 aa10.46□□□□□ -0.73
HMGN3-201ENST00000275036 C12orf45Q8N5I9 185 aaPredicted RBP10.46□□□□□ -0.73
HMGN3-201ENST00000275036 OR1B1Q8NGR6 318 aa10.46□□□□□ -0.73
HMGN3-201ENST00000275036 LINC00052Q96N35 136 aa10.46□□□□□ -0.73
HMGN3-201ENST00000275036 C11orf1Q9H5F2 150 aa10.46□□□□□ -0.73
HMGN3-201ENST00000275036 SLC25A22Q9H936 323 aa10.46□□□□□ -0.73
HMGN3-201ENST00000275036 DOK5Q9P104 306 aa10.46□□□□□ -0.73
HMGN3-201ENST00000275036 HLA-DRB4X5D2U9 266 aa10.46□□□□□ -0.73
HMGN3-201ENST00000275036 DNAH10Q8IVF4 4471 aa10.46□□□□□ -0.74
HMGN3-201ENST00000275036 K7EPK0 472 aa10.45□□□□□ -0.74
HMGN3-201ENST00000275036 PSMB3P49720 205 aa10.45□□□□□ -0.74
HMGN3-201ENST00000275036 OR10P1Q8NGE3 313 aa10.45□□□□□ -0.74
HMGN3-201ENST00000275036 PHLDA1Q8WV24 401 aaPredicted RBP10.45□□□□□ -0.74
HMGN3-201ENST00000275036 C20orf173Q96LM9 149 aa10.45□□□□□ -0.74
HMGN3-201ENST00000275036 SCRT1Q9BWW7 348 aa10.45□□□□□ -0.74
HMGN3-201ENST00000275036 SAV1Q9H4B6 383 aaPredicted RBP10.45□□□□□ -0.74
HMGN3-201ENST00000275036 IGHV4-28A0A0C4DH34 117 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 C5orf51A6NDU8 294 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 FNDC10F2Z333 226 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 F6UB75 175 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 H3BRN7 92 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 ISLRO14498 428 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 LY6G6CO95867 125 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 IL5P05113 134 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 LINC00869P0C866 280 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 ID1P41134 155 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 PLP1P60201 277 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 SLC38A11Q08AI6 406 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 IL15RAQ13261 267 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 ZNF846Q147U1 533 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 C11orf45Q8TAV5 145 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 RSG1Q9BU20 258 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 TMEM147Q9BVK8 224 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 SLC25A39Q9BZJ4 359 aaPredicted RBP10.44□□□□□ -0.74
HMGN3-201ENST00000275036 NPVFQ9HCQ7 196 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 PTTG2Q9NZH5 202 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 XCL2Q9UBD3 114 aa10.44□□□□□ -0.74
HMGN3-201ENST00000275036 LSM5Q9Y4Y9 91 aaKnown RBP10.44□□□□□ -0.74
HMGN3-201ENST00000275036 UPK1BO75841 260 aa10.43□□□□□ -0.74
HMGN3-201ENST00000275036 IGKV3-20P01619 116 aa10.43□□□□□ -0.74
HMGN3-201ENST00000275036 GALR1P47211 349 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms