RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 PDE6HQ13956 83 aa7.15□□□□□ -1.27
SCUBE3-201ENST00000274938 SS18Q15532 418 aa7.15□□□□□ -1.27
SCUBE3-201ENST00000274938 BOD1L2Q8IYS8 172 aa7.15□□□□□ -1.27
SCUBE3-201ENST00000274938 KIAA0100Q14667 2235 aaKnown RBP7.15□□□□□ -1.27
SCUBE3-201ENST00000274938 MARF1Q9Y4F3 1742 aaKnown RBP7.15□□□□□ -1.27
SCUBE3-201ENST00000274938 TRPT1Q86TN4 253 aaKnown RBP7.15□□□□□ -1.27
SCUBE3-201ENST00000274938 C9orf106Q8NAJ2 232 aa7.15□□□□□ -1.27
SCUBE3-201ENST00000274938 MRAPQ8TCY5 172 aa7.15□□□□□ -1.27
SCUBE3-201ENST00000274938 TSSC4Q9Y5U2 329 aaPredicted RBP7.15□□□□□ -1.27
SCUBE3-201ENST00000274938 SCN9AQ15858 1988 aa7.15□□□□□ -1.27
SCUBE3-201ENST00000274938 IGHV1-24A0A0C4DH33 117 aa7.14□□□□□ -1.27
SCUBE3-201ENST00000274938 ATP6V0BQ99437 205 aa7.14□□□□□ -1.27
SCUBE3-201ENST00000274938 IGKV1-12A0A0C4DH73 117 aa7.14□□□□□ -1.27
SCUBE3-201ENST00000274938 IGKV1D-12P01611 117 aa7.14□□□□□ -1.27
SCUBE3-201ENST00000274938 BMPERQ8N8U9 685 aa7.14□□□□□ -1.27
SCUBE3-201ENST00000274938 TMEM258P61165 79 aa7.14□□□□□ -1.27
SCUBE3-201ENST00000274938 CNTRLQ7Z7A1 2325 aa7.14□□□□□ -1.27
SCUBE3-201ENST00000274938 SCN4AP35499 1836 aa7.14□□□□□ -1.27
SCUBE3-201ENST00000274938 SRRM4A7MD48 611 aaKnown RBP7.14□□□□□ -1.27
SCUBE3-201ENST00000274938 HGFACQ04756 655 aa7.14□□□□□ -1.27
SCUBE3-201ENST00000274938 ZNF474Q6S9Z5 364 aaPredicted RBP7.14□□□□□ -1.27
SCUBE3-201ENST00000274938 IGHV2-26A0A0B4J1V2 119 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 C1QTNF4Q9BXJ3 329 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 C15orf32Q32M92 178 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 Q8N8P6 123 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 SIPA1L3O60292 1781 aaPredicted RBP7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 QSER1Q2KHR3 1735 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 ZNF625Q96I27 306 aaPredicted RBP7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 SNHG12Q9BXW3 62 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 LIME1Q9H400 295 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 RPL15P61313 204 aaKnown RBP7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 PMVKQ15126 192 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 C14orf178Q8N769 122 aaPredicted RBP7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 C1orf159Q96HA4 380 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 USMG5Q96IX5 58 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 PCM1Q15154 2024 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 IGHV1-18A0A0C4DH31 117 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 A0A1W2PRX2 142 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 IGHV1-46P01743 117 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 IGLC2P0DOY2 106 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 IGLC3P0DOY3 106 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 CD33P20138 364 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 DSCR9P59020 149 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 AMN1Q8IY45 258 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 TMEM75Q8N9X5 138 aa7.13□□□□□ -1.27
SCUBE3-201ENST00000274938 FAM223BA6NKX1 122 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 PRSS46E5RG02 174 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 K7EP13 123 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 IGLV3-19P01714 112 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 FAM223AQ8IWN6 122 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 TRGV1A0A0A0MS02 117 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 TRAV40A0A0B4J280 105 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 IGHV1-3A0A0C4DH29 117 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 RHODO00212 210 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 IGHV1-8P0DP01 117 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 ADCYAP1P18509 176 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 SMCHD1A6NHR9 2005 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 C18orf32Q8TCD1 76 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 NTF4P34130 210 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 SPXQ9BT56 116 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 SRD5A1P18405 259 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 HOXD3P31249 432 aaPredicted RBP7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 SHANK2-AS3Q9BTD1 123 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 PFN1P07737 140 aaKnown RBP7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 FXYD7P58549 80 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 TCF15Q12870 199 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 LGALS9BQ3B8N2 356 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 LGALS9CQ6DKI2 356 aa7.12□□□□□ -1.27
SCUBE3-201ENST00000274938 H0YJW9 148 aa7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 SIVA1O15304 175 aa7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 KLHDC3Q9BQ90 382 aa7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 C15orf62A8K5M9 175 aa7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 DEFB104AQ8WTQ1 72 aa7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 ZFC3H1O60293 1989 aaKnown RBP7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 COX8AP10176 69 aa7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 PRB3Q04118 309 aaPredicted RBP7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 C10orf55Q5SWW7 151 aa7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 FAM104BQ5XKR9 115 aa7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 NABP1Q96AH0 204 aa7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 A0A087WV48 116 aa7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 M0R1W7 72 aa7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 IL17RELQ6ZVW7 336 aa7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 STPG4Q8N801 248 aa7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 GAGE12HA6NDE8 117 aa7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 YPEL3P61236 119 aaPredicted RBP7.11□□□□□ -1.27
SCUBE3-201ENST00000274938 TRAV13-1A0A0B4J241 112 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 IGHV2-70P01814 119 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 C5orf64Q2M2E5 130 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 WFDC12Q8WWY7 111 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 TMEM126AQ9H061 195 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 GAGE12JA6NER3 117 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 FCN3O75636 299 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 GAGE7O76087 117 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 GAGE12FP0CL80 117 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 GAGE12GP0CL81 117 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 GAGE12IP0CL82 117 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 GAGE4Q13068 117 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 FAM231DQ6ZW35 169 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 LILRA1O75019 489 aa7.1□□□□□ -1.27
SCUBE3-201ENST00000274938 MST1P26927 711 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms