RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 C10orf113Q5VZT2 155 aa19.07■□□□□ 0.64
SSBP4-201ENST00000270061 PATE2Q6UY27 113 aa19.07■□□□□ 0.64
SSBP4-201ENST00000270061 PQLC2Q6ZP29 291 aa19.07■□□□□ 0.64
SSBP4-201ENST00000270061 IQCF2Q8IXL9 164 aa19.07■□□□□ 0.64
SSBP4-201ENST00000270061 TRBV9A0A0B4J1U6 114 aa19.06■□□□□ 0.64
SSBP4-201ENST00000270061 NDUFB8O95169 186 aa19.06■□□□□ 0.64
SSBP4-201ENST00000270061 IGKV1-17P01599 117 aa19.06■□□□□ 0.64
SSBP4-201ENST00000270061 IGHG2P01859 326 aa19.06■□□□□ 0.64
SSBP4-201ENST00000270061 IGF1P05019 195 aa19.06■□□□□ 0.64
SSBP4-201ENST00000270061 C8orf88P0DMB2 117 aa19.06■□□□□ 0.64
SSBP4-201ENST00000270061 CD81P60033 236 aa19.06■□□□□ 0.64
SSBP4-201ENST00000270061 ATRAIDQ6UW56 229 aa19.06■□□□□ 0.64
SSBP4-201ENST00000270061 CYB561D1Q8N8Q1 229 aa19.06■□□□□ 0.64
SSBP4-201ENST00000270061 VN1R17PQ8TDU5 208 aa19.06■□□□□ 0.64
SSBP4-201ENST00000270061 PAGE4O60829 102 aa19.06■□□□□ 0.64
SSBP4-201ENST00000270061 TXN2Q99757 166 aa19.06■□□□□ 0.64
SSBP4-201ENST00000270061 TXNDC17Q9BRA2 123 aa19.06■□□□□ 0.64
SSBP4-201ENST00000270061 NKX6-2Q9C056 277 aaPredicted RBP19.06■□□□□ 0.64
SSBP4-201ENST00000270061 C21orf62Q9NYP8 219 aa19.06■□□□□ 0.64
SSBP4-201ENST00000270061 OR2J3O76001 311 aa19.05■□□□□ 0.64
SSBP4-201ENST00000270061 TIGITQ495A1 244 aa19.05■□□□□ 0.64
SSBP4-201ENST00000270061 OR4X2Q8NGF9 303 aa19.05■□□□□ 0.64
SSBP4-201ENST00000270061 FBXL7Q9UJT9 491 aa19.05■□□□□ 0.64
SSBP4-201ENST00000270061 ADARB2-AS1A8MUL3 147 aa19.04■□□□□ 0.64
SSBP4-201ENST00000270061 G3V318 75 aa19.04■□□□□ 0.64
SSBP4-201ENST00000270061 PSG1P11464 419 aa19.04■□□□□ 0.64
SSBP4-201ENST00000270061 OR4F17Q8NGA8 305 aa19.04■□□□□ 0.64
SSBP4-201ENST00000270061 SUN5Q8TC36 379 aa19.04■□□□□ 0.64
SSBP4-201ENST00000270061 OR4F4Q96R69 305 aa19.04■□□□□ 0.64
SSBP4-201ENST00000270061 TMEM167BQ9NRX6 74 aa19.04■□□□□ 0.64
SSBP4-201ENST00000270061 ARL2-SNX15V9GYD0 113 aa19.04■□□□□ 0.64
SSBP4-201ENST00000270061 TRAV41A0A0B4J266 112 aa19.04■□□□□ 0.64
SSBP4-201ENST00000270061 F8W735 103 aaPredicted RBP19.04■□□□□ 0.64
SSBP4-201ENST00000270061 TMEM250H0YL14 139 aa19.04■□□□□ 0.64
SSBP4-201ENST00000270061 YPEL3P61236 119 aaPredicted RBP19.04■□□□□ 0.64
SSBP4-201ENST00000270061 FAM167A-AS1Q96KT0 104 aa19.04■□□□□ 0.64
SSBP4-201ENST00000270061 GNG7O60262 68 aa19.03■□□□□ 0.64
SSBP4-201ENST00000270061 HYPMO75409 117 aa19.03■□□□□ 0.64
SSBP4-201ENST00000270061 FAM90A2PQ658T7 463 aa19.03■□□□□ 0.64
SSBP4-201ENST00000270061 C10orf99Q6UWK7 81 aa19.03■□□□□ 0.64
SSBP4-201ENST00000270061 CLRN3Q8NCR9 226 aa19.03■□□□□ 0.64
SSBP4-201ENST00000270061 ZNF503Q96F45 646 aa19.03■□□□□ 0.64
SSBP4-201ENST00000270061 DOK5Q9P104 306 aa19.03■□□□□ 0.64
SSBP4-201ENST00000270061 A0A1W2PRX2 142 aa19.02■□□□□ 0.64
SSBP4-201ENST00000270061 BRI3O95415 125 aa19.02■□□□□ 0.64
SSBP4-201ENST00000270061 TOMM40O96008 361 aa19.02■□□□□ 0.64
SSBP4-201ENST00000270061 RD3LP0DJH9 198 aa19.02■□□□□ 0.64
SSBP4-201ENST00000270061 DEFA6Q01524 100 aa19.02■□□□□ 0.64
SSBP4-201ENST00000270061 TCTEX1D4Q5JR98 221 aa19.02■□□□□ 0.64
SSBP4-201ENST00000270061 SLC25A2Q9BXI2 301 aa19.02■□□□□ 0.64
SSBP4-201ENST00000270061 ORM2P19652 201 aa19.01■□□□□ 0.63
SSBP4-201ENST00000270061 NECAP1Q8NC96 275 aa19.01■□□□□ 0.63
SSBP4-201ENST00000270061 OR1B1Q8NGR6 318 aa19.01■□□□□ 0.63
SSBP4-201ENST00000270061 NOL4LQ96MY1 436 aaPredicted RBP19.01■□□□□ 0.63
SSBP4-201ENST00000270061 ZNF355PQ9NSJ1 428 aa19.01■□□□□ 0.63
SSBP4-201ENST00000270061 ZNF580Q9UK33 172 aa19.01■□□□□ 0.63
SSBP4-201ENST00000270061 TSSC4Q9Y5U2 329 aaPredicted RBP19.01■□□□□ 0.63
SSBP4-201ENST00000270061 C11orf94C9JXX5 98 aa19.01■□□□□ 0.63
SSBP4-201ENST00000270061 MORN5Q5VZ52 161 aa19.01■□□□□ 0.63
SSBP4-201ENST00000270061 LINC00305Q7Z4B0 112 aa19.01■□□□□ 0.63
SSBP4-201ENST00000270061 SCGB2A1O75556 95 aa19■□□□□ 0.63
SSBP4-201ENST00000270061 RHOGP84095 191 aa19■□□□□ 0.63
SSBP4-201ENST00000270061 ZNF329Q86UD4 541 aa19■□□□□ 0.63
SSBP4-201ENST00000270061 OR51G1Q8NGK1 321 aa19■□□□□ 0.63
SSBP4-201ENST00000270061 LINC00527Q9UJ94 153 aa19■□□□□ 0.63
SSBP4-201ENST00000270061 PDE6DO43924 150 aa18.99■□□□□ 0.63
SSBP4-201ENST00000270061 OR7C2O60412 319 aa18.99■□□□□ 0.63
SSBP4-201ENST00000270061 Q56UQ5 140 aa18.99■□□□□ 0.63
SSBP4-201ENST00000270061 KHDC1LQ5JSQ8 128 aa18.99■□□□□ 0.63
SSBP4-201ENST00000270061 STXBP6Q8NFX7 210 aa18.99■□□□□ 0.63
SSBP4-201ENST00000270061 MRPL27Q9P0M9 148 aaKnown RBP18.99■□□□□ 0.63
SSBP4-201ENST00000270061 CEBPGP53567 150 aa18.98■□□□□ 0.63
SSBP4-201ENST00000270061 UBE2G2P60604 165 aa18.98■□□□□ 0.63
SSBP4-201ENST00000270061 C15orf32Q32M92 178 aa18.98■□□□□ 0.63
SSBP4-201ENST00000270061 ZNF502Q8TBZ5 544 aa18.98■□□□□ 0.63
SSBP4-201ENST00000270061 UHRF2Q96PU4 802 aa18.98■□□□□ 0.63
SSBP4-201ENST00000270061 S4R3C0 116 aa18.98■□□□□ 0.63
SSBP4-201ENST00000270061 TRAV5A0A0B4J249 113 aa18.98■□□□□ 0.63
SSBP4-201ENST00000270061 FAM74A7A6NL05 159 aa18.98■□□□□ 0.63
SSBP4-201ENST00000270061 H3BUA1 57 aa18.98■□□□□ 0.63
SSBP4-201ENST00000270061 AP4M1O00189 453 aa18.98■□□□□ 0.63
SSBP4-201ENST00000270061 SLC35B1P78383 322 aa18.98■□□□□ 0.63
SSBP4-201ENST00000270061 CST9LP1Q5W188 147 aa18.98■□□□□ 0.63
SSBP4-201ENST00000270061 ATP6V0BQ99437 205 aa18.98■□□□□ 0.63
SSBP4-201ENST00000270061 GAR1Q9NY12 217 aaKnown RBP18.98■□□□□ 0.63
SSBP4-201ENST00000270061 HIGD1AQ9Y241 93 aa18.98■□□□□ 0.63
SSBP4-201ENST00000270061 WI2-2373I1.2A0A1W2PRP0 233 aa18.97■□□□□ 0.63
SSBP4-201ENST00000270061 F6UZH7 168 aa18.97■□□□□ 0.63
SSBP4-201ENST00000270061 H3BQ15 152 aa18.97■□□□□ 0.63
SSBP4-201ENST00000270061 OR2C1O95371 312 aa18.97■□□□□ 0.63
SSBP4-201ENST00000270061 PF4V1P10720 104 aa18.97■□□□□ 0.63
SSBP4-201ENST00000270061 PPIFP30405 207 aaKnown RBP18.97■□□□□ 0.63
SSBP4-201ENST00000270061 ZNF491Q8N8L2 437 aa18.97■□□□□ 0.63
SSBP4-201ENST00000270061 NIPSNAP3BQ9BS92 247 aa18.97■□□□□ 0.63
SSBP4-201ENST00000270061 YTHDF2Q9Y5A9 579 aaKnown RBP18.97■□□□□ 0.63
SSBP4-201ENST00000270061 FAM223BA6NKX1 122 aa18.96■□□□□ 0.63
SSBP4-201ENST00000270061 WIPF1O43516 503 aa18.96■□□□□ 0.63
SSBP4-201ENST00000270061 ATP5G3P48201 142 aa18.96■□□□□ 0.63
SSBP4-201ENST00000270061 LYZP61626 148 aa18.96■□□□□ 0.63
SSBP4-201ENST00000270061 BTN1A1Q13410 526 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms