RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 SNRPGP15A8MWD9 76 aa7.03□□□□□ -1.28
VPS41-201ENST00000265745 C11orf94C9JXX5 98 aa7.03□□□□□ -1.28
VPS41-201ENST00000265745 DEDDO75618 318 aa7.03□□□□□ -1.28
VPS41-201ENST00000265745 MALP21145 153 aa7.03□□□□□ -1.28
VPS41-201ENST00000265745 TCTAP57738 103 aa7.03□□□□□ -1.28
VPS41-201ENST00000265745 NUTF2P61970 127 aaKnown RBP7.03□□□□□ -1.28
VPS41-201ENST00000265745 ZNF79Q15937 498 aa7.03□□□□□ -1.28
VPS41-201ENST00000265745 C1orf194Q5T5A4 169 aa7.03□□□□□ -1.28
VPS41-201ENST00000265745 OR8G2PQ6IF36 304 aa7.03□□□□□ -1.28
VPS41-201ENST00000265745 DEDD2Q8WXF8 326 aa7.03□□□□□ -1.28
VPS41-201ENST00000265745 PBDC1Q9BVG4 233 aa7.03□□□□□ -1.28
VPS41-201ENST00000265745 TMED3Q9Y3Q3 217 aa7.03□□□□□ -1.28
VPS41-201ENST00000265745 KMT2AQ03164 3969 aa7.02□□□□□ -1.29
VPS41-201ENST00000265745 IGKV1OR2-108A0A075B7D4 117 aa7.02□□□□□ -1.29
VPS41-201ENST00000265745 SFT2D2O95562 160 aa7.02□□□□□ -1.29
VPS41-201ENST00000265745 FABP1P07148 127 aa7.02□□□□□ -1.29
VPS41-201ENST00000265745 IAPPP10997 89 aa7.02□□□□□ -1.29
VPS41-201ENST00000265745 HLA-DMBP28068 263 aa7.02□□□□□ -1.29
VPS41-201ENST00000265745 S100A5P33763 92 aa7.02□□□□□ -1.29
VPS41-201ENST00000265745 NUP62P37198 522 aaPredicted RBP7.02□□□□□ -1.29
VPS41-201ENST00000265745 NKX2-1P43699 371 aaPredicted RBP7.02□□□□□ -1.29
VPS41-201ENST00000265745 RAB11AP62491 216 aa7.02□□□□□ -1.29
VPS41-201ENST00000265745 CCDC190Q86UF4 302 aa7.02□□□□□ -1.29
VPS41-201ENST00000265745 SLC35E1Q96K37 410 aa7.02□□□□□ -1.29
VPS41-201ENST00000265745 TRGV9Q99603 122 aa7.02□□□□□ -1.29
VPS41-201ENST00000265745 C1QTNF4Q9BXJ3 329 aa7.02□□□□□ -1.29
VPS41-201ENST00000265745 XCL2Q9UBD3 114 aa7.02□□□□□ -1.29
VPS41-201ENST00000265745 APLNQ9ULZ1 77 aa7.02□□□□□ -1.29
VPS41-201ENST00000265745 IGLL5B9A064 214 aa7.01□□□□□ -1.29
VPS41-201ENST00000265745 PRSS46E5RG02 174 aa7.01□□□□□ -1.29
VPS41-201ENST00000265745 SYNGR2O43760 224 aa7.01□□□□□ -1.29
VPS41-201ENST00000265745 MED6O75586 246 aa7.01□□□□□ -1.29
VPS41-201ENST00000265745 HLA-DRB4P13762 266 aa7.01□□□□□ -1.29
VPS41-201ENST00000265745 LYZP61626 148 aa7.01□□□□□ -1.29
VPS41-201ENST00000265745 SRSF3P84103 164 aaKnown RBP7.01□□□□□ -1.29
VPS41-201ENST00000265745 PPP1R1AQ13522 171 aa7.01□□□□□ -1.29
VPS41-201ENST00000265745 OR2F1Q13607 317 aa7.01□□□□□ -1.29
VPS41-201ENST00000265745 Q6ZTC4 211 aa7.01□□□□□ -1.29
VPS41-201ENST00000265745 THAP8Q8NA92 274 aa7.01□□□□□ -1.29
VPS41-201ENST00000265745 CIB3Q96Q77 187 aaPredicted RBP7.01□□□□□ -1.29
VPS41-201ENST00000265745 HLA-DRB4X5D2U9 266 aa7.01□□□□□ -1.29
VPS41-201ENST00000265745 CCDC160A6NGH7 325 aa7□□□□□ -1.29
VPS41-201ENST00000265745 SOCS3O14543 225 aa7□□□□□ -1.29
VPS41-201ENST00000265745 HOXB5P09067 269 aa7□□□□□ -1.29
VPS41-201ENST00000265745 ID1P41134 155 aa7□□□□□ -1.29
VPS41-201ENST00000265745 DEFB1P60022 68 aa7□□□□□ -1.29
VPS41-201ENST00000265745 RPP30P78346 268 aaKnown RBP7□□□□□ -1.29
VPS41-201ENST00000265745 C12orf74Q32Q52 190 aa7□□□□□ -1.29
VPS41-201ENST00000265745 GDF5OSQ5U4N7 250 aa7□□□□□ -1.29
VPS41-201ENST00000265745 GGNBP1Q5YKI7 109 aa7□□□□□ -1.29
VPS41-201ENST00000265745 CENPSQ8N2Z9 138 aa7□□□□□ -1.29
VPS41-201ENST00000265745 LINC00052Q96N35 136 aa7□□□□□ -1.29
VPS41-201ENST00000265745 MAGT1Q9H0U3 335 aa7□□□□□ -1.29
VPS41-201ENST00000265745 RBM38Q9H0Z9 239 aaKnown RBP7□□□□□ -1.29
VPS41-201ENST00000265745 SAV1Q9H4B6 383 aaPredicted RBP7□□□□□ -1.29
VPS41-201ENST00000265745 PAIP2BQ9ULR5 123 aaKnown RBP7□□□□□ -1.29
VPS41-201ENST00000265745 TRAV10A0A0B4J240 114 aa6.99□□□□□ -1.29
VPS41-201ENST00000265745 ZNF705FA8MVS1 300 aaPredicted RBP6.99□□□□□ -1.29
VPS41-201ENST00000265745 ZNF701M0R085 212 aaPredicted RBP6.99□□□□□ -1.29
VPS41-201ENST00000265745 WRBO00258 174 aa6.99□□□□□ -1.29
VPS41-201ENST00000265745 CFDP00746 253 aaPredicted RBP6.99□□□□□ -1.29
VPS41-201ENST00000265745 ZNF705DP0CH99 300 aaPredicted RBP6.99□□□□□ -1.29
VPS41-201ENST00000265745 ZNF705BP0CI00 300 aaPredicted RBP6.99□□□□□ -1.29
VPS41-201ENST00000265745 PSMB3P49720 205 aa6.99□□□□□ -1.29
VPS41-201ENST00000265745 UBE2MP61081 183 aaKnown RBP6.99□□□□□ -1.29
VPS41-201ENST00000265745 SPANXN5Q5MJ07 72 aa6.99□□□□□ -1.29
VPS41-201ENST00000265745 SPANXN2Q5MJ10 180 aa6.99□□□□□ -1.29
VPS41-201ENST00000265745 GSG1LQ6UXU4 331 aa6.99□□□□□ -1.29
VPS41-201ENST00000265745 ZNF705AQ6ZN79 300 aaPredicted RBP6.99□□□□□ -1.29
VPS41-201ENST00000265745 TMEM182Q6ZP80 229 aaPredicted RBP6.99□□□□□ -1.29
VPS41-201ENST00000265745 FOXI2Q6ZQN5 318 aa6.99□□□□□ -1.29
VPS41-201ENST00000265745 OR8I2Q8N0Y5 310 aa6.99□□□□□ -1.29
VPS41-201ENST00000265745 PPP1R14BQ96C90 147 aa6.99□□□□□ -1.29
VPS41-201ENST00000265745 NEU1Q99519 415 aa6.99□□□□□ -1.29
VPS41-201ENST00000265745 SRRQ9GZT4 340 aa6.99□□□□□ -1.29
VPS41-201ENST00000265745 CELA1Q9UNI1 258 aa6.99□□□□□ -1.29
VPS41-201ENST00000265745 AGRNO00468 2067 aa6.98□□□□□ -1.29
VPS41-201ENST00000265745 C9orf170A2RU37 121 aa6.98□□□□□ -1.29
VPS41-201ENST00000265745 ZNF98A6NK75 572 aa6.98□□□□□ -1.29
VPS41-201ENST00000265745 ISLRO14498 428 aa6.98□□□□□ -1.29
VPS41-201ENST00000265745 NDUFB6O95139 128 aa6.98□□□□□ -1.29
VPS41-201ENST00000265745 IGKV3-20P01619 116 aa6.98□□□□□ -1.29
VPS41-201ENST00000265745 BAK1Q16611 211 aa6.98□□□□□ -1.29
VPS41-201ENST00000265745 SAMD13Q5VXD3 122 aa6.98□□□□□ -1.29
VPS41-201ENST00000265745 SPATA31B1PQ5VZV4 182 aa6.98□□□□□ -1.29
VPS41-201ENST00000265745 ZNF709Q8N972 641 aa6.98□□□□□ -1.29
VPS41-201ENST00000265745 COQ8AQ8NI60 647 aa6.98□□□□□ -1.29
VPS41-201ENST00000265745 C17orf77Q96MU5 243 aa6.98□□□□□ -1.29
VPS41-201ENST00000265745 RNF126Q9BV68 326 aa6.98□□□□□ -1.29
VPS41-201ENST00000265745 SLC45A2Q9UMX9 530 aa6.98□□□□□ -1.29
VPS41-201ENST00000265745 STRAPQ9Y3F4 350 aaKnown RBP6.98□□□□□ -1.29
VPS41-201ENST00000265745 IGHV4-4A0A075B6R2 117 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 DEFB131BA0A096LNP1 70 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 NAP1L6A6NFF2 107 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 SMIM9A6NGZ8 99 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 F6UB75 175 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 ADAP1O75689 374 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 ORM2P19652 201 aa6.97□□□□□ -1.29
VPS41-201ENST00000265745 GATA2P23769 480 aaPredicted RBP6.97□□□□□ -1.29
VPS41-201ENST00000265745 PAX9P55771 341 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms