RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 V9GYV3 84 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 IGHV3-13P01766 116 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 IGHV3-7P01780 117 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 SNRPD3P62318 126 aaKnown RBP9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 SRSF1Q07955 248 aaKnown RBP eCLIP9.68□□□□□ -0.868e-8■■■■□ 19.5
DNMT3A-201ENST00000264709 LIME1Q9H400 295 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 SLC25A45Q8N413 288 aa9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 C16orf92Q96LL3 132 aa9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 IGHV1-24A0A0C4DH33 117 aa9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 PSMB11A5LHX3 300 aa9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 TPRX1Q8N7U7 411 aa9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 SHISA9B4DS77 424 aa9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 ZFHX2Q9C0A1 2572 aaPredicted RBP9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 FAM90A27PA6NNH2 459 aa9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 LEPP41159 167 aa9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 GFRA1P56159 465 aa9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 TMEM160Q9NX00 188 aa9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 DSCAMO60469 2012 aa9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 PLAUP00749 431 aa9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 TMEM95Q3KNT9 176 aa9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 ZNF562Q6V9R5 426 aa9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 LRP4O75096 1905 aa9.67□□□□□ -0.86
DNMT3A-201ENST00000264709 A0A1W2PR77 199 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 TAL2Q16559 108 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 GCSAMLQ5JQS6 135 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 SSC4DQ8WTU2 575 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 PPIAL4EA0A075B759 164 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 SRRM5B3KS81 715 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 PPIAL4FP0DN26 164 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 PAX9P55771 341 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 SRSF6Q13247 344 aaKnown RBP9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 BVES-AS1Q5T3Y7 98 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 LCN12Q6JVE5 192 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 COLCA1Q6ZS62 124 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 TMEM14BQ9NUH8 114 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 PPIAL4AQ9Y536 164 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 C17orf82Q86X59 251 aaPredicted RBP9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 BCL6BQ8N143 479 aaPredicted RBP9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 C8orf46Q8TAG6 207 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 RNF166Q96A37 237 aaPredicted RBP9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 PLA2G3Q9NZ20 509 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 ATP6V0BQ99437 205 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 SLC50A1Q9BRV3 221 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 DEPPQ9NTK1 212 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 DOPEY1Q5JWR5 2465 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 LINC01565O15544 149 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 DDB2Q92466 427 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 TMSB15BA0A087X1C1 80 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 WDR82Q6UXN9 313 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 ZNF826PQ6ZT77 177 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 RFNGQ9Y644 331 aa9.66□□□□□ -0.86
DNMT3A-201ENST00000264709 HOXA3O43365 443 aaPredicted RBP9.65□□□□□ -0.86
DNMT3A-201ENST00000264709 COQ2Q96H96 371 aa9.65□□□□□ -0.86
DNMT3A-201ENST00000264709 GEMIN7Q9H840 131 aaKnown RBP9.65□□□□□ -0.86
DNMT3A-201ENST00000264709 TCRAP04437 139 aa9.65□□□□□ -0.86
DNMT3A-201ENST00000264709 MRPL14Q6P1L8 145 aaKnown RBP9.65□□□□□ -0.86
DNMT3A-201ENST00000264709 MOSP00540 346 aa9.65□□□□□ -0.86
DNMT3A-201ENST00000264709 FAM106AQ4KMX7 169 aa9.65□□□□□ -0.86
DNMT3A-201ENST00000264709 ZIC4Q8N9L1 334 aa9.65□□□□□ -0.86
DNMT3A-201ENST00000264709 HIVEP3Q5T1R4 2406 aa9.65□□□□□ -0.86
DNMT3A-201ENST00000264709 SAA1P0DJI8 122 aaPredicted RBP9.65□□□□□ -0.86
DNMT3A-201ENST00000264709 Q6ZRM9 215 aa9.65□□□□□ -0.86
DNMT3A-201ENST00000264709 LAGE3Q14657 143 aa9.65□□□□□ -0.87
DNMT3A-201ENST00000264709 RAX2Q96IS3 184 aa9.65□□□□□ -0.87
DNMT3A-201ENST00000264709 SRSF8Q9BRL6 282 aaKnown RBP9.65□□□□□ -0.87
DNMT3A-201ENST00000264709 TMEM238C9JI98 176 aa9.65□□□□□ -0.87
DNMT3A-201ENST00000264709 ZFYVE26Q68DK2 2539 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 A0A087X0K7 114 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 FOXC1Q12948 553 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 CRIM1Q9NZV1 1036 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 CHTOPQ9Y3Y2 248 aaKnown RBP9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 LHX2P50458 406 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 SCRT1Q9BWW7 348 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 FZR1Q9UM11 496 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 CCL25O15444 150 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 HCP5Q6MZN7 132 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 PPDPFLQ8WWR9 84 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 SCGB3A1Q96QR1 104 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 TET2Q6N021 2002 aaPredicted RBP9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 MYF5P13349 255 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 ZNF726P1Q15940 193 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 TEX45Q8NA69 505 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 GTSF1LQ9H1H1 148 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 PIMREGQ9BSJ6 248 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 TMEM8BA6NDV4 472 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 PAX1P15863 534 aa9.64□□□□□ -0.87
DNMT3A-201ENST00000264709 Q6ZSR3 168 aa9.63□□□□□ -0.87
DNMT3A-201ENST00000264709 LMO1P25800 156 aa9.63□□□□□ -0.87
DNMT3A-201ENST00000264709 FOXF2Q12947 444 aa9.63□□□□□ -0.87
DNMT3A-201ENST00000264709 PSG7Q13046 419 aa9.63□□□□□ -0.87
DNMT3A-201ENST00000264709 SAP25Q8TEE9 199 aa9.63□□□□□ -0.87
DNMT3A-201ENST00000264709 A0A1W2PPM0 123 aa9.63□□□□□ -0.87
DNMT3A-201ENST00000264709 FABP5P3A8MUU1 101 aa9.63□□□□□ -0.87
DNMT3A-201ENST00000264709 CD33P20138 364 aa9.63□□□□□ -0.87
DNMT3A-201ENST00000264709 PSG3Q16557 428 aa9.63□□□□□ -0.87
DNMT3A-201ENST00000264709 SPATA31B1PQ5VZV4 182 aa9.63□□□□□ -0.87
DNMT3A-201ENST00000264709 ZNF837Q96EG3 531 aaPredicted RBP9.63□□□□□ -0.87
DNMT3A-201ENST00000264709 HILPDAQ9Y5L2 63 aa9.63□□□□□ -0.87
DNMT3A-201ENST00000264709 Q6P435 159 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms