RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 NBEAP1P0C6P0 100 aa10.21□□□□□ -0.77
LIG1-201ENST00000263274 BSPH1Q075Z2 132 aa10.21□□□□□ -0.77
LIG1-201ENST00000263274 OR10J3Q5JRS4 329 aa10.21□□□□□ -0.77
LIG1-201ENST00000263274 VSTM2AQ8TAG5 236 aa10.21□□□□□ -0.77
LIG1-201ENST00000263274 CACNG8Q8WXS5 425 aa10.21□□□□□ -0.77
LIG1-201ENST00000263274 C19orf24Q9BVV8 132 aa10.21□□□□□ -0.77
LIG1-201ENST00000263274 MRPL32Q9BYC8 188 aaKnown RBP10.21□□□□□ -0.77
LIG1-201ENST00000263274 CHODLQ9H9P2 273 aa10.21□□□□□ -0.77
LIG1-201ENST00000263274 S4R3C0 116 aa10.21□□□□□ -0.77
LIG1-201ENST00000263274 ZZEF1O43149 2961 aa10.21□□□□□ -0.78
LIG1-201ENST00000263274 TM4SF5O14894 197 aa10.21□□□□□ -0.78
LIG1-201ENST00000263274 HIST1H1EP10412 219 aaKnown RBP10.21□□□□□ -0.78
LIG1-201ENST00000263274 CNTFRP26992 372 aa10.21□□□□□ -0.78
LIG1-201ENST00000263274 SPACA3Q8IXA5 215 aa10.21□□□□□ -0.78
LIG1-201ENST00000263274 KALRNO60229 2985 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 TCRBV4S1A1TA0A5B7 111 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 C17orf100A8MU93 164 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 C16orf97H3BN30 126 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 POU2AF1Q16633 256 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 ZNF329Q86UD4 541 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 KLHDC1Q8N7A1 406 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 WASHC3Q9Y3C0 194 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 A0A1W2PPI3 338 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 CHEK1O14757 476 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 P01737 135 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 IGLC2P0DOY2 106 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 IGLC3P0DOY3 106 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 ZNF138P52744 262 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 PRRX1P54821 245 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 COX19Q49B96 90 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 TMEM177Q53S58 311 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 SMIM27A0A1W2PRY6 76 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 PRRG2O14669 202 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 CNIH1O95406 144 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 PSG1P11464 419 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 COMPP49747 757 aaPredicted RBP10.2□□□□□ -0.78
LIG1-201ENST00000263274 PRNTQ86SH4 94 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 NIT1Q86X76 327 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 PERPQ96FX8 193 aa10.2□□□□□ -0.78
LIG1-201ENST00000263274 K7EP13 123 aa10.19□□□□□ -0.78
LIG1-201ENST00000263274 GRAMD2BQ96HH9 432 aa10.19□□□□□ -0.78
LIG1-201ENST00000263274 IGF2BP2-AS1Q96M15 143 aa10.19□□□□□ -0.78
LIG1-201ENST00000263274 PMCHL2Q9BQD1 86 aa10.19□□□□□ -0.78
LIG1-201ENST00000263274 COL8A1P27658 744 aa10.19□□□□□ -0.78
LIG1-201ENST00000263274 NBL1P41271 181 aa10.19□□□□□ -0.78
LIG1-201ENST00000263274 GATA4P43694 442 aa10.19□□□□□ -0.78
LIG1-201ENST00000263274 RUSC1-AS1Q66K80 236 aa10.19□□□□□ -0.78
LIG1-201ENST00000263274 FAM222BQ8WU58 562 aa10.19□□□□□ -0.78
LIG1-201ENST00000263274 IGFBPL1Q8WX77 278 aa10.19□□□□□ -0.78
LIG1-201ENST00000263274 CST9LQ9H4G1 147 aa10.19□□□□□ -0.78
LIG1-201ENST00000263274 EPDR1Q9UM22 224 aa10.19□□□□□ -0.78
LIG1-201ENST00000263274 COL27A1Q8IZC6 1860 aaPredicted RBP10.19□□□□□ -0.78
LIG1-201ENST00000263274 ARHGAP32A7KAX9 2087 aa10.19□□□□□ -0.78
LIG1-201ENST00000263274 RPL27AP46776 148 aaKnown RBP10.18□□□□□ -0.78
LIG1-201ENST00000263274 TCTAP57738 103 aa10.18□□□□□ -0.78
LIG1-201ENST00000263274 ADIPOQQ15848 244 aa10.18□□□□□ -0.78
LIG1-201ENST00000263274 GDF5OSQ5U4N7 250 aa10.18□□□□□ -0.78
LIG1-201ENST00000263274 TP73-AS1Q9UF72 201 aa10.18□□□□□ -0.78
LIG1-201ENST00000263274 SPENQ96T58 3664 aaKnown RBP10.18□□□□□ -0.78
LIG1-201ENST00000263274 OCIAD2Q56VL3 154 aa10.18□□□□□ -0.78
LIG1-201ENST00000263274 IGFL2Q6UWQ7 119 aa10.18□□□□□ -0.78
LIG1-201ENST00000263274 INSIG2Q9Y5U4 225 aa10.18□□□□□ -0.78
LIG1-201ENST00000263274 FNDC10F2Z333 226 aa10.18□□□□□ -0.78
LIG1-201ENST00000263274 TSPOP30536 169 aa10.18□□□□□ -0.78
LIG1-201ENST00000263274 ZNF833PQ6ZTB9 187 aa10.18□□□□□ -0.78
LIG1-201ENST00000263274 DSCAML1Q8TD84 2053 aa10.18□□□□□ -0.78
LIG1-201ENST00000263274 ESDP10768 282 aa10.17□□□□□ -0.78
LIG1-201ENST00000263274 GOLT1AQ6ZVE7 132 aa10.17□□□□□ -0.78
LIG1-201ENST00000263274 EXOC3-AS1Q8N2X6 119 aa10.17□□□□□ -0.78
LIG1-201ENST00000263274 FAM169BQ8N8A8 192 aa10.17□□□□□ -0.78
LIG1-201ENST00000263274 OR5AN1Q8NGI8 311 aa10.17□□□□□ -0.78
LIG1-201ENST00000263274 FXYD5Q96DB9 178 aa10.17□□□□□ -0.78
LIG1-201ENST00000263274 FBXL15Q9H469 300 aa10.17□□□□□ -0.78
LIG1-201ENST00000263274 CIARTQ8N365 385 aaPredicted RBP10.17□□□□□ -0.78
LIG1-201ENST00000263274 TMEM167AQ8TBQ9 72 aa10.17□□□□□ -0.78
LIG1-201ENST00000263274 TMEM186Q96B77 213 aa10.17□□□□□ -0.78
LIG1-201ENST00000263274 CSTL1Q9H114 145 aa10.17□□□□□ -0.78
LIG1-201ENST00000263274 RAI1Q7Z5J4 1906 aaPredicted RBP10.17□□□□□ -0.78
LIG1-201ENST00000263274 CACNA1AO00555 2505 aa10.17□□□□□ -0.78
LIG1-201ENST00000263274 TMSB15BA0A087X1C1 80 aa10.17□□□□□ -0.78
LIG1-201ENST00000263274 CHRDL1Q9BU40 450 aa10.17□□□□□ -0.78
LIG1-201ENST00000263274 IGHV2-70DA0A0C4DH43 119 aa10.16□□□□□ -0.78
LIG1-201ENST00000263274 EBLN2Q6P2I7 272 aa10.16□□□□□ -0.78
LIG1-201ENST00000263274 GFRALQ6UXV0 394 aa10.16□□□□□ -0.78
LIG1-201ENST00000263274 SSX8Q7RTT4 187 aa10.16□□□□□ -0.78
LIG1-201ENST00000263274 GPR82Q96P67 336 aa10.16□□□□□ -0.78
LIG1-201ENST00000263274 Q9H3A6 140 aa10.16□□□□□ -0.78
LIG1-201ENST00000263274 MUC21A0A0G2JKD1 596 aa10.16□□□□□ -0.78
LIG1-201ENST00000263274 MUC21A0A140T8X8 626 aa10.16□□□□□ -0.78
LIG1-201ENST00000263274 FAM181BA6NEQ2 426 aa10.16□□□□□ -0.78
LIG1-201ENST00000263274 A8MWL6 223 aa10.16□□□□□ -0.78
LIG1-201ENST00000263274 J3KRW8 73 aa10.16□□□□□ -0.78
LIG1-201ENST00000263274 MUC21Q5SSG8 566 aa10.16□□□□□ -0.78
LIG1-201ENST00000263274 LINC00322Q6ZN03 302 aaPredicted RBP10.16□□□□□ -0.78
LIG1-201ENST00000263274 TMEM178BH3BS89 294 aa10.15□□□□□ -0.78
LIG1-201ENST00000263274 K7ERU9 68 aa10.15□□□□□ -0.78
LIG1-201ENST00000263274 Q8N976 141 aa10.15□□□□□ -0.78
LIG1-201ENST00000263274 MEGF9Q9H1U4 602 aa10.15□□□□□ -0.78
LIG1-201ENST00000263274 IGKV1D-37A0A075B6S9 117 aa10.15□□□□□ -0.78
LIG1-201ENST00000263274 A0A0G2JNJ9 132 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms