RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 MISP3Q96FF7 219 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 MAP1LC3BQ9GZQ8 125 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 TMEM231Q9H6L2 316 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 VAX2Q9UIW0 290 aa10.27□□□□□ -0.77
SGCA-201ENST00000262018 A0A087WWC5 75 aa10.26□□□□□ -0.77
SGCA-201ENST00000262018 BCL2P10415 239 aa10.26□□□□□ -0.77
SGCA-201ENST00000262018 MYCNOSP40205 109 aa10.26□□□□□ -0.77
SGCA-201ENST00000262018 CDC34P49427 236 aaPredicted RBP10.26□□□□□ -0.77
SGCA-201ENST00000262018 GUCA2BQ16661 112 aa10.26□□□□□ -0.77
SGCA-201ENST00000262018 TMEM116Q8NCL8 245 aa10.26□□□□□ -0.77
SGCA-201ENST00000262018 NPIPB3Q92617 1050 aa10.26□□□□□ -0.77
SGCA-201ENST00000262018 ACY3Q96HD9 319 aa10.26□□□□□ -0.77
SGCA-201ENST00000262018 FAM103A1Q9BTL3 118 aaKnown RBP10.26□□□□□ -0.77
SGCA-201ENST00000262018 SLC25A22Q9H936 323 aa10.26□□□□□ -0.77
SGCA-201ENST00000262018 MRPL36Q9P0J6 103 aaKnown RBP10.26□□□□□ -0.77
SGCA-201ENST00000262018 IGKV1D-37A0A075B6S9 117 aa10.25□□□□□ -0.77
SGCA-201ENST00000262018 LOC102723971A0A1B0GUV8 181 aa10.25□□□□□ -0.77
SGCA-201ENST00000262018 CXorf65A6NEN9 183 aa10.25□□□□□ -0.77
SGCA-201ENST00000262018 C9JQL5 133 aa10.25□□□□□ -0.77
SGCA-201ENST00000262018 TMEM250H0YL14 139 aa10.25□□□□□ -0.77
SGCA-201ENST00000262018 I3L2K1 104 aa10.25□□□□□ -0.77
SGCA-201ENST00000262018 TSPAN4O14817 238 aa10.25□□□□□ -0.77
SGCA-201ENST00000262018 MT-CO2P00403 227 aa10.25□□□□□ -0.77
SGCA-201ENST00000262018 RND2P52198 227 aa10.25□□□□□ -0.77
SGCA-201ENST00000262018 GCSAMLQ5JQS6 135 aa10.25□□□□□ -0.77
SGCA-201ENST00000262018 CYP2G1PQ6ZSU1 146 aa10.25□□□□□ -0.77
SGCA-201ENST00000262018 C8orf86Q6ZUL3 223 aa10.25□□□□□ -0.77
SGCA-201ENST00000262018 RAB24Q969Q5 203 aa10.25□□□□□ -0.77
SGCA-201ENST00000262018 NIPSNAP3BQ9BS92 247 aa10.25□□□□□ -0.77
SGCA-201ENST00000262018 TMA7Q9Y2S6 64 aaKnown RBP10.25□□□□□ -0.77
SGCA-201ENST00000262018 SMAD5-AS1Q9Y6J3 95 aa10.25□□□□□ -0.77
SGCA-201ENST00000262018 DEFA4P12838 97 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 FGF8P55075 233 aaPredicted RBP10.24□□□□□ -0.77
SGCA-201ENST00000262018 RNF212Q495C1 297 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 C18orf65Q6ZTR6 163 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 TRGV9Q99603 122 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 HSPB9Q9BQS6 159 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 ZMAT4Q9H898 229 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 ARL2-SNX15V9GYD0 113 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 CSMD3Q7Z407 3707 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 IGLV11-55A0A075B6I3 123 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 A0A1W2PPV4 95 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 SH2D7A6NKC9 451 aaPredicted RBP10.24□□□□□ -0.77
SGCA-201ENST00000262018 K7EIM0 57 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 IGHV3-48P01763 117 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 SELENOTP62341 195 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 FLI1Q01543 452 aaPredicted RBP10.24□□□□□ -0.77
SGCA-201ENST00000262018 ICAM4Q14773 271 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 KLK9Q2XQG4 91 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 C9orf152Q5JTZ5 239 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 ATRAIDQ6UW56 229 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 TMEM68Q96MH6 324 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 FANCD2OSQ96PS1 177 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 DUX3Q96PT4 197 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 RARRES2Q99969 163 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 TMEM242Q9NWH2 141 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 KLK9Q9UKQ9 250 aa10.24□□□□□ -0.77
SGCA-201ENST00000262018 ZFP92A6NM28 416 aa10.23□□□□□ -0.77
SGCA-201ENST00000262018 EIF3GO75821 320 aaKnown RBP eCLIP10.23□□□□□ -0.77
SGCA-201ENST00000262018 IGHG2P01859 326 aa10.23□□□□□ -0.77
SGCA-201ENST00000262018 SRP19P09132 144 aaKnown RBP10.23□□□□□ -0.77
SGCA-201ENST00000262018 STAG3L2P0CL84 134 aa10.23□□□□□ -0.77
SGCA-201ENST00000262018 STAG3L3P0CL85 134 aa10.23□□□□□ -0.77
SGCA-201ENST00000262018 FOLR2P14207 255 aa10.23□□□□□ -0.77
SGCA-201ENST00000262018 RHOBP62745 196 aa10.23□□□□□ -0.77
SGCA-201ENST00000262018 HAGHQ16775 308 aa10.23□□□□□ -0.77
SGCA-201ENST00000262018 C9orf66Q5T8R8 295 aa10.23□□□□□ -0.77
SGCA-201ENST00000262018 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.23□□□□□ -0.77
SGCA-201ENST00000262018 OR4X1Q8NH49 305 aa10.23□□□□□ -0.77
SGCA-201ENST00000262018 GNG13Q9P2W3 67 aa10.23□□□□□ -0.77
SGCA-201ENST00000262018 ZNF256Q9Y2P7 627 aaPredicted RBP10.23□□□□□ -0.77
SGCA-201ENST00000262018 PSMB11A5LHX3 300 aa10.22□□□□□ -0.77
SGCA-201ENST00000262018 ATP6V0E1O15342 81 aa10.22□□□□□ -0.77
SGCA-201ENST00000262018 HMGB3O15347 200 aaKnown RBP10.22□□□□□ -0.77
SGCA-201ENST00000262018 MT-ND4LP03901 98 aa10.22□□□□□ -0.77
SGCA-201ENST00000262018 OR5G3P0C626 314 aa10.22□□□□□ -0.77
SGCA-201ENST00000262018 GATA2P23769 480 aaPredicted RBP10.22□□□□□ -0.77
SGCA-201ENST00000262018 CRIP2P52943 208 aaPredicted RBP10.22□□□□□ -0.77
SGCA-201ENST00000262018 MEF2BQ02080 365 aaPredicted RBP10.22□□□□□ -0.77
SGCA-201ENST00000262018 KLHL30-AS1Q8NEE0 82 aa10.22□□□□□ -0.77
SGCA-201ENST00000262018 TMEM190Q8WZ59 177 aa10.22□□□□□ -0.77
SGCA-201ENST00000262018 TVP23CQ96ET8 276 aa10.22□□□□□ -0.77
SGCA-201ENST00000262018 RNF2Q99496 336 aa10.22□□□□□ -0.77
SGCA-201ENST00000262018 IGHV3-21A0A0B4J1V1 117 aa10.21□□□□□ -0.78
SGCA-201ENST00000262018 M0R036 132 aa10.21□□□□□ -0.78
SGCA-201ENST00000262018 AP4M1O00189 453 aa10.21□□□□□ -0.78
SGCA-201ENST00000262018 TGOLN2O43493 480 aa10.21□□□□□ -0.78
SGCA-201ENST00000262018 PDE6DO43924 150 aa10.21□□□□□ -0.78
SGCA-201ENST00000262018 HIST1H1BP16401 226 aaKnown RBP10.21□□□□□ -0.78
SGCA-201ENST00000262018 ATF4P18848 351 aaPredicted RBP10.21□□□□□ -0.78
SGCA-201ENST00000262018 NPBWR1P48145 328 aa10.21□□□□□ -0.78
SGCA-201ENST00000262018 ZNF90Q03938 601 aa10.21□□□□□ -0.78
SGCA-201ENST00000262018 AKIRIN2Q53H80 203 aa10.21□□□□□ -0.78
SGCA-201ENST00000262018 SPATA31B1PQ5VZV4 182 aa10.21□□□□□ -0.78
SGCA-201ENST00000262018 UNQ5815/PRO19632Q6UWF5 114 aa10.21□□□□□ -0.78
SGCA-201ENST00000262018 ZNF329Q86UD4 541 aa10.21□□□□□ -0.78
SGCA-201ENST00000262018 OR5T1Q8NG75 326 aa10.21□□□□□ -0.78
SGCA-201ENST00000262018 GATAD1Q8WUU5 269 aa10.21□□□□□ -0.78
SGCA-201ENST00000262018 TMPRSS5Q9H3S3 457 aa10.21□□□□□ -0.78
SGCA-201ENST00000262018 FUT9Q9Y231 359 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms