RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 RITA1Q96K30 269 aa18.13■□□□□ 0.49
MCF2L-201ENST00000261963 FNDC4Q9H6D8 234 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-201ENST00000261963 GAGE12BA1L429 117 aa18.13■□□□□ 0.49
MCF2L-201ENST00000261963 OR2J3O76001 311 aa18.13■□□□□ 0.49
MCF2L-201ENST00000261963 GPR6P46095 362 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-201ENST00000261963 C19orf24Q9BVV8 132 aa18.13■□□□□ 0.49
MCF2L-201ENST00000261963 CRXO43186 299 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-201ENST00000261963 IGHV1-8P0DP01 117 aa18.12■□□□□ 0.49
MCF2L-201ENST00000261963 MRGPRG-AS1Q2M3A8 158 aa18.12■□□□□ 0.49
MCF2L-201ENST00000261963 NUP35Q8NFH5 326 aa18.12■□□□□ 0.49
MCF2L-201ENST00000261963 SPOCK3Q9BQ16 436 aa18.12■□□□□ 0.49
MCF2L-201ENST00000261963 SLC25A33Q9BSK2 321 aa18.12■□□□□ 0.49
MCF2L-201ENST00000261963 TPSG1Q9NRR2 321 aa18.12■□□□□ 0.49
MCF2L-201ENST00000261963 C1RLQ9NZP8 487 aa18.12■□□□□ 0.49
MCF2L-201ENST00000261963 PSG9Q00887 426 aa18.12■□□□□ 0.49
MCF2L-201ENST00000261963 FAM162BQ5T6X4 162 aa18.12■□□□□ 0.49
MCF2L-201ENST00000261963 MORN5Q5VZ52 161 aa18.12■□□□□ 0.49
MCF2L-201ENST00000261963 ZNF355PQ9NSJ1 428 aa18.12■□□□□ 0.49
MCF2L-201ENST00000261963 A0A1W2PRE2 83 aa18.11■□□□□ 0.49
MCF2L-201ENST00000261963 hDV102S1A0JD36 115 aa18.11■□□□□ 0.49
MCF2L-201ENST00000261963 TMEM238C9JI98 176 aa18.11■□□□□ 0.49
MCF2L-201ENST00000261963 MBD6Q96DN6 1003 aa18.11■□□□□ 0.49
MCF2L-201ENST00000261963 GRAMD2BQ96HH9 432 aa18.11■□□□□ 0.49
MCF2L-201ENST00000261963 SSBP4Q9BWG4 385 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-201ENST00000261963 CD5LO43866 347 aa18.11■□□□□ 0.49
MCF2L-201ENST00000261963 TAS2R45P59539 299 aa18.11■□□□□ 0.49
MCF2L-201ENST00000261963 FAM167A-AS1Q96KT0 104 aa18.11■□□□□ 0.49
MCF2L-201ENST00000261963 SCNM1Q9BWG6 230 aa18.11■□□□□ 0.49
MCF2L-201ENST00000261963 SLC25A17O43808 307 aa18.1■□□□□ 0.49
MCF2L-201ENST00000261963 FAM87AP0C7U9 286 aa18.1■□□□□ 0.49
MCF2L-201ENST00000261963 C8orf88P0DMB2 117 aa18.1■□□□□ 0.49
MCF2L-201ENST00000261963 APOBEC3AP31941 199 aaPredicted RBP18.1■□□□□ 0.49
MCF2L-201ENST00000261963 ASPHD1Q5U4P2 390 aa18.1■□□□□ 0.49
MCF2L-201ENST00000261963 FAM231DQ6ZW35 169 aa18.1■□□□□ 0.49
MCF2L-201ENST00000261963 VKORC1Q9BQB6 163 aa18.1■□□□□ 0.49
MCF2L-201ENST00000261963 LOC102724200A0A096LPH7 203 aaPredicted RBP18.1■□□□□ 0.49
MCF2L-201ENST00000261963 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.1■□□□□ 0.49
MCF2L-201ENST00000261963 HSBP1L1C9JCN9 74 aa18.1■□□□□ 0.49
MCF2L-201ENST00000261963 SYS1-DBNDD2H3BUS1 97 aa18.1■□□□□ 0.49
MCF2L-201ENST00000261963 PLAUP00749 431 aa18.1■□□□□ 0.49
MCF2L-201ENST00000261963 TRAV5A0A0B4J249 113 aa18.09■□□□□ 0.49
MCF2L-201ENST00000261963 PLXNB1O43157 2135 aa18.09■□□□□ 0.49
MCF2L-201ENST00000261963 RBPJQ06330 500 aa18.09■□□□□ 0.49
MCF2L-201ENST00000261963 FAM120AOSQ5T036 256 aa18.09■□□□□ 0.49
MCF2L-201ENST00000261963 SLC25A2Q9BXI2 301 aa18.09■□□□□ 0.49
MCF2L-201ENST00000261963 TMEM133Q9H2Q1 129 aa18.09■□□□□ 0.49
MCF2L-201ENST00000261963 MRPL36Q9P0J6 103 aaKnown RBP18.09■□□□□ 0.49
MCF2L-201ENST00000261963 SPTA1P02549 2419 aa18.09■□□□□ 0.49
MCF2L-201ENST00000261963 CAMPP49913 170 aa18.09■□□□□ 0.49
MCF2L-201ENST00000261963 DLX1P56177 255 aa18.09■□□□□ 0.49
MCF2L-201ENST00000261963 URB1-AS1Q96HZ7 61 aa18.09■□□□□ 0.49
MCF2L-201ENST00000261963 IGKV1D-37A0A075B6S9 117 aa18.08■□□□□ 0.49
MCF2L-201ENST00000261963 IGHV3-72A0A0B4J1Y9 119 aa18.08■□□□□ 0.49
MCF2L-201ENST00000261963 A0A1W2PPI3 338 aa18.08■□□□□ 0.49
MCF2L-201ENST00000261963 IGHV3-48P01763 117 aa18.08■□□□□ 0.49
MCF2L-201ENST00000261963 MRPL32Q9BYC8 188 aaKnown RBP18.08■□□□□ 0.49
MCF2L-201ENST00000261963 PEF1Q9UBV8 284 aaKnown RBP18.08■□□□□ 0.49
MCF2L-201ENST00000261963 B9A039 149 aa18.08■□□□□ 0.48
MCF2L-201ENST00000261963 NPIPB3Q92617 1050 aa18.08■□□□□ 0.48
MCF2L-201ENST00000261963 TMEM191AQ9H0A3 160 aa18.08■□□□□ 0.48
MCF2L-201ENST00000261963 SH2D7A6NKC9 451 aaPredicted RBP18.07■□□□□ 0.48
MCF2L-201ENST00000261963 CD3EP07766 207 aa18.07■□□□□ 0.48
MCF2L-201ENST00000261963 MC5RP33032 325 aa18.07■□□□□ 0.48
MCF2L-201ENST00000261963 VMA21Q3ZAQ7 101 aa18.07■□□□□ 0.48
MCF2L-201ENST00000261963 MEGF9Q9H1U4 602 aa18.07■□□□□ 0.48
MCF2L-201ENST00000261963 CHTOPQ9Y3Y2 248 aaKnown RBP18.07■□□□□ 0.48
MCF2L-201ENST00000261963 LYNX1G3V0Z9 82 aa18.07■□□□□ 0.48
MCF2L-201ENST00000261963 LYNX1P0DP58 116 aa18.07■□□□□ 0.48
MCF2L-201ENST00000261963 LINC00479Q96M42 142 aa18.07■□□□□ 0.48
MCF2L-201ENST00000261963 SCRT2Q9NQ03 307 aa18.07■□□□□ 0.48
MCF2L-201ENST00000261963 MALRD1Q5VYJ5 2156 aa18.06■□□□□ 0.48
MCF2L-201ENST00000261963 PRB3Q04118 309 aaPredicted RBP18.06■□□□□ 0.48
MCF2L-201ENST00000261963 CHRDL1Q9BU40 450 aa18.06■□□□□ 0.48
MCF2L-201ENST00000261963 TPRP12270 2363 aaKnown RBP18.06■□□□□ 0.48
MCF2L-201ENST00000261963 TRAV8-6A0A0B4J262 113 aa18.06■□□□□ 0.48
MCF2L-201ENST00000261963 LEPROTL1O95214 131 aa18.06■□□□□ 0.48
MCF2L-201ENST00000261963 TMEM11P17152 192 aa18.06■□□□□ 0.48
MCF2L-201ENST00000261963 PATE2Q6UY27 113 aa18.06■□□□□ 0.48
MCF2L-201ENST00000261963 THAP8Q8NA92 274 aa18.06■□□□□ 0.48
MCF2L-201ENST00000261963 LINC01560Q8TB33 94 aa18.06■□□□□ 0.48
MCF2L-201ENST00000261963 ANKHD1Q8IWZ3 2542 aaKnown RBP18.05■□□□□ 0.48
MCF2L-201ENST00000261963 CORTO00230 105 aa18.05■□□□□ 0.48
MCF2L-201ENST00000261963 ENSAO43768 121 aaKnown RBP18.05■□□□□ 0.48
MCF2L-201ENST00000261963 HLA-DRB1P01911 266 aa18.05■□□□□ 0.48
MCF2L-201ENST00000261963 LGALS7P47929 136 aa18.05■□□□□ 0.48
MCF2L-201ENST00000261963 SUB1P53999 127 aaKnown RBP eCLIP18.05■□□□□ 0.48
MCF2L-201ENST00000261963 HIST1H1AQ02539 215 aaPredicted RBP18.05■□□□□ 0.48
MCF2L-201ENST00000261963 RUSC1-AS1Q66K80 236 aa18.05■□□□□ 0.48
MCF2L-201ENST00000261963 ATP5L2Q7Z4Y8 100 aa18.05■□□□□ 0.48
MCF2L-201ENST00000261963 IGHV1-24A0A0C4DH33 117 aa18.04■□□□□ 0.48
MCF2L-201ENST00000261963 TCRBV4S1A1TA0A5B7 111 aa18.04■□□□□ 0.48
MCF2L-201ENST00000261963 HIGD1CA8MV81 97 aa18.04■□□□□ 0.48
MCF2L-201ENST00000261963 LINC00173Q6ZV60 143 aa18.04■□□□□ 0.48
MCF2L-201ENST00000261963 CHCHD1Q96BP2 118 aaKnown RBP18.04■□□□□ 0.48
MCF2L-201ENST00000261963 UBE2L3P68036 154 aaKnown RBP18.04■□□□□ 0.48
MCF2L-201ENST00000261963 ZNF841Q6ZN19 808 aa18.04■□□□□ 0.48
MCF2L-201ENST00000261963 RALYQ9UKM9 306 aaKnown RBP18.04■□□□□ 0.48
MCF2L-201ENST00000261963 FSTL3O95633 263 aa18.03■□□□□ 0.48
MCF2L-201ENST00000261963 IGLV1-47P01700 117 aa18.03■□□□□ 0.48
MCF2L-201ENST00000261963 IGLC1P0CG04 106 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms