RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 TRGV9Q99603 122 aa13.04□□□□□ -0.32
TM9SF1-201ENST00000261789 Q9H3A6 140 aa13.04□□□□□ -0.32
TM9SF1-201ENST00000261789 IGLV1-47P01700 117 aa13.04□□□□□ -0.32
TM9SF1-201ENST00000261789 RPLP1P05386 114 aaKnown RBP13.04□□□□□ -0.32
TM9SF1-201ENST00000261789 CRYGBP07316 175 aa13.04□□□□□ -0.32
TM9SF1-201ENST00000261789 FOXA3P55318 350 aaPredicted RBP13.04□□□□□ -0.32
TM9SF1-201ENST00000261789 PMCHL1Q16048 86 aa13.04□□□□□ -0.32
TM9SF1-201ENST00000261789 PPP1R27Q86WC6 154 aa13.04□□□□□ -0.32
TM9SF1-201ENST00000261789 GTSF1Q8WW33 167 aa13.04□□□□□ -0.32
TM9SF1-201ENST00000261789 ALKBH7Q9BT30 221 aaPredicted RBP13.04□□□□□ -0.32
TM9SF1-201ENST00000261789 MLST8Q9BVC4 326 aa13.04□□□□□ -0.32
TM9SF1-201ENST00000261789 SPTA1P02549 2419 aa13.04□□□□□ -0.32
TM9SF1-201ENST00000261789 TEX22C9J3V5 150 aa13.03□□□□□ -0.32
TM9SF1-201ENST00000261789 HSBP1O75506 76 aa13.03□□□□□ -0.32
TM9SF1-201ENST00000261789 PSG1P11464 419 aa13.03□□□□□ -0.32
TM9SF1-201ENST00000261789 MMDQ15546 238 aa13.03□□□□□ -0.32
TM9SF1-201ENST00000261789 EXOC3-AS1Q8N2X6 119 aa13.03□□□□□ -0.32
TM9SF1-201ENST00000261789 C22orf15Q8WYQ4 148 aa13.03□□□□□ -0.32
TM9SF1-201ENST00000261789 PGLYRP4Q96LB8 373 aa13.03□□□□□ -0.32
TM9SF1-201ENST00000261789 RALYQ9UKM9 306 aaKnown RBP13.03□□□□□ -0.32
TM9SF1-201ENST00000261789 KLF12Q9Y4X4 402 aa13.03□□□□□ -0.32
TM9SF1-201ENST00000261789 SH2D7A6NKC9 451 aaPredicted RBP13.03□□□□□ -0.32
TM9SF1-201ENST00000261789 BUB1B-PAK6H3BSN5 160 aa13.03□□□□□ -0.32
TM9SF1-201ENST00000261789 KIR3DL3Q8N743 410 aa13.03□□□□□ -0.32
TM9SF1-201ENST00000261789 STXBP6Q8NFX7 210 aa13.03□□□□□ -0.32
TM9SF1-201ENST00000261789 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.02□□□□□ -0.32
TM9SF1-201ENST00000261789 EBLN2Q6P2I7 272 aa13.02□□□□□ -0.32
TM9SF1-201ENST00000261789 LINC01560Q8TB33 94 aa13.02□□□□□ -0.32
TM9SF1-201ENST00000261789 M0QZK8 103 aa13.02□□□□□ -0.33
TM9SF1-201ENST00000261789 M0R2Z0 102 aa13.02□□□□□ -0.33
TM9SF1-201ENST00000261789 TCRAP04437 139 aa13.02□□□□□ -0.33
TM9SF1-201ENST00000261789 PVRIGQ6DKI7 326 aa13.02□□□□□ -0.33
TM9SF1-201ENST00000261789 RASL11AQ6T310 242 aa13.02□□□□□ -0.33
TM9SF1-201ENST00000261789 C8orf46Q8TAG6 207 aa13.02□□□□□ -0.33
TM9SF1-201ENST00000261789 RPP21Q9H633 154 aaKnown RBP13.02□□□□□ -0.33
TM9SF1-201ENST00000261789 MRPL27Q9P0M9 148 aaKnown RBP13.02□□□□□ -0.33
TM9SF1-201ENST00000261789 F11RQ9Y624 299 aaKnown RBP13.02□□□□□ -0.33
TM9SF1-201ENST00000261789 LY6HO94772 140 aa13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 RBP4P02753 201 aa13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 Q56UQ5 140 aa13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 LDLRAD2Q5SZI1 272 aa13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 CIARTQ8N365 385 aaPredicted RBP13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 URB1-AS1Q96HZ7 61 aa13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 TMEM208Q9BTX3 173 aa13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 ZFHX3Q15911 3703 aa13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 A0A1B0GXF2 115 aa13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 GRNP28799 593 aaKnown RBP13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 APOBEC3AP31941 199 aaPredicted RBP13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 PLGLAQ15195 96 aa13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 C5orf17Q8NAS9 161 aa13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 SRSF12Q8WXF0 261 aaKnown RBP13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 LPAR2Q9HBW0 351 aa13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 CLEC5AQ9NY25 188 aa13.01□□□□□ -0.33
TM9SF1-201ENST00000261789 HRNRQ86YZ3 2850 aaPredicted RBP13□□□□□ -0.33
TM9SF1-201ENST00000261789 FAM181BA6NEQ2 426 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 LTAP01374 205 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 P01737 135 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 IGLC1P0CG04 106 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 IGLC2P0DOY2 106 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 IGLC3P0DOY3 106 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 SSX8Q7RTT4 187 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 RPEQ96AT9 228 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 C17orf77Q96MU5 243 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 HIGD1AQ9Y241 93 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 S4R3C0 116 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 ANKHD1Q8IWZ3 2542 aaKnown RBP13□□□□□ -0.33
TM9SF1-201ENST00000261789 PPIAL4CA0A0B4J2A2 164 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 TOMM40O96008 361 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 PPIAL4GP0DN37 164 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 SPATA12Q7Z6I5 190 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 TXN2Q99757 166 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 PRSS22Q9GZN4 317 aa13□□□□□ -0.33
TM9SF1-201ENST00000261789 NPSP0C0P6 89 aa12.99□□□□□ -0.33
TM9SF1-201ENST00000261789 HBBP68871 147 aa12.99□□□□□ -0.33
TM9SF1-201ENST00000261789 Q6ZN92 141 aa12.99□□□□□ -0.33
TM9SF1-201ENST00000261789 GOLT1AQ6ZVE7 132 aa12.99□□□□□ -0.33
TM9SF1-201ENST00000261789 CHRDL1Q9BU40 450 aa12.99□□□□□ -0.33
TM9SF1-201ENST00000261789 SLC25A39Q9BZJ4 359 aaPredicted RBP12.99□□□□□ -0.33
TM9SF1-201ENST00000261789 NGBQ9NPG2 151 aa12.99□□□□□ -0.33
TM9SF1-201ENST00000261789 C19orf71A6NCJ1 209 aa12.99□□□□□ -0.33
TM9SF1-201ENST00000261789 OR2J3O76001 311 aa12.99□□□□□ -0.33
TM9SF1-201ENST00000261789 KLF5Q13887 457 aaPredicted RBP12.99□□□□□ -0.33
TM9SF1-201ENST00000261789 PRNTQ86SH4 94 aa12.99□□□□□ -0.33
TM9SF1-201ENST00000261789 FMC1Q96HJ9 113 aa12.99□□□□□ -0.33
TM9SF1-201ENST00000261789 CA7P43166 264 aa12.98□□□□□ -0.33
TM9SF1-201ENST00000261789 ONECUT1Q9UBC0 465 aa12.98□□□□□ -0.33
TM9SF1-201ENST00000261789 PTPRQQ9UMZ3 2332 aa12.98□□□□□ -0.33
TM9SF1-201ENST00000261789 A8MWL6 223 aa12.98□□□□□ -0.33
TM9SF1-201ENST00000261789 I3L2K1 104 aa12.98□□□□□ -0.33
TM9SF1-201ENST00000261789 CD3EP07766 207 aa12.98□□□□□ -0.33
TM9SF1-201ENST00000261789 KLF17Q5JT82 389 aaPredicted RBP12.98□□□□□ -0.33
TM9SF1-201ENST00000261789 DAZAP1Q96EP5 407 aaKnown RBP12.98□□□□□ -0.33
TM9SF1-201ENST00000261789 RASL11BQ9BPW5 248 aa12.98□□□□□ -0.33
TM9SF1-201ENST00000261789 B9A039 149 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 CNIH1O95406 144 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 IGKV1-17P01599 117 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 LINC00173Q6ZV60 143 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 ATP5L2Q7Z4Y8 100 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 UQCR10Q9UDW1 63 aa12.97□□□□□ -0.33
TM9SF1-201ENST00000261789 TP73-AS1Q9UF72 201 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms