RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 PPIAL4DF5H284 164 aa11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 NBEAP1P0C6P0 100 aa11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 PPIAL4FP0DN26 164 aa11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 GATA4P43694 442 aa11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 RBPJQ06330 500 aa11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 COX19Q49B96 90 aa11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 KIR3DL3Q8N743 410 aa11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 TPPP3Q9BW30 176 aa11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 A0A1W2PPI3 338 aa11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 CNTFRP26992 372 aa11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 ZNF138P52744 262 aa11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 HIST1H1EP10412 219 aaKnown RBP11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 UNQ5815/PRO19632Q6UWF5 114 aa11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 BBC3Q96PG8 261 aaPredicted RBP11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 ARL2-SNX15V9GYD0 113 aa11.64□□□□□ -0.55
SFSWAP-201ENST00000261674 VWC2LB2RUY7 222 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 LYZP61626 148 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 EBLN2Q6P2I7 272 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 ZNF833PQ6ZTB9 187 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 KLHDC1Q8N7A1 406 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 FAM169BQ8N8A8 192 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 FXYD5Q96DB9 178 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 GRAMD2BQ96HH9 432 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 DYNLRB1Q9NP97 96 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 EPDR1Q9UM22 224 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 A0A1W2PRD5 423 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 A0A1W2PRF3 423 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 A0A1W2PRM7 423 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 BSPH1Q075Z2 132 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 VMA21Q3ZAQ7 101 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 ZNF841Q6ZN19 808 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 VSTM2AQ8TAG5 236 aa11.63□□□□□ -0.55
SFSWAP-201ENST00000261674 CGB1A6NKQ9 187 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 C17orf100A8MU93 164 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 TMEM177Q53S58 311 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 LRRC10Q5BKY1 277 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 LINC00322Q6ZN03 302 aaPredicted RBP11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 OR5AN1Q8NGI8 311 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 WASHC3Q9Y3C0 194 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 IGKV1D-37A0A075B6S9 117 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 PSMB11A5LHX3 300 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 P01737 135 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 C22orf15Q8WYQ4 148 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 C22orf46C9J442 243 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 LYNX1G3V0Z9 82 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 FCN3O75636 299 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 LYNX1P0DP58 116 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 PLGLAQ15195 96 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 ADIPOQQ15848 244 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 PMCHL2Q9BQD1 86 aa11.62□□□□□ -0.55
SFSWAP-201ENST00000261674 FAM181BA6NEQ2 426 aa11.61□□□□□ -0.55
SFSWAP-201ENST00000261674 RBP4P02753 201 aa11.61□□□□□ -0.55
SFSWAP-201ENST00000261674 COX7A1P24310 79 aa11.61□□□□□ -0.55
SFSWAP-201ENST00000261674 CTRLP40313 264 aa11.61□□□□□ -0.55
SFSWAP-201ENST00000261674 PTTG1IPP53801 180 aa11.61□□□□□ -0.55
SFSWAP-201ENST00000261674 PERPQ96FX8 193 aa11.61□□□□□ -0.55
SFSWAP-201ENST00000261674 S4R3C0 116 aa11.61□□□□□ -0.55
SFSWAP-201ENST00000261674 LINC00173Q6ZV60 143 aa11.61□□□□□ -0.55
SFSWAP-201ENST00000261674 TMEM167AQ8TBQ9 72 aa11.61□□□□□ -0.55
SFSWAP-201ENST00000261674 IGFBPL1Q8WX77 278 aa11.61□□□□□ -0.55
SFSWAP-201ENST00000261674 ALKBH7Q9BT30 221 aaPredicted RBP11.61□□□□□ -0.55
SFSWAP-201ENST00000261674 FASNP49327 2511 aaKnown RBP11.61□□□□□ -0.55
SFSWAP-201ENST00000261674 C16orf97H3BN30 126 aa11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 SSX8Q7RTT4 187 aa11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 PRNTQ86SH4 94 aa11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 VPS13CQ709C8 3753 aa11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 CHEK1O14757 476 aa11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 IGLL1P15814 213 aa11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 BTF3P20290 206 aaKnown RBP11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 COL8A1P27658 744 aa11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 EXOC3-AS1Q8N2X6 119 aa11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 CIARTQ8N365 385 aaPredicted RBP11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 GPR82Q96P67 336 aa11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 NCOR1P1Q9H4R4 102 aa11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 TSPOP30536 169 aa11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 RPL27AP46776 148 aaKnown RBP11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 ATP5IP56385 69 aaPredicted RBP11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 Q71RC1 249 aaPredicted RBP11.6□□□□□ -0.55
SFSWAP-201ENST00000261674 ABCA12Q86UK0 2595 aa11.59□□□□□ -0.55
SFSWAP-201ENST00000261674 C20orf202A1L168 122 aa11.59□□□□□ -0.55
SFSWAP-201ENST00000261674 CEACAM8P31997 349 aaPredicted RBP11.59□□□□□ -0.55
SFSWAP-201ENST00000261674 ZFP30Q9Y2G7 519 aa11.59□□□□□ -0.55
SFSWAP-201ENST00000261674 PTPN13Q12923 2485 aa11.59□□□□□ -0.55
SFSWAP-201ENST00000261674 GOLT1AQ6ZVE7 132 aa11.59□□□□□ -0.55
SFSWAP-201ENST00000261674 PNKDQ8N490 385 aa11.59□□□□□ -0.55
SFSWAP-201ENST00000261674 TMEM186Q96B77 213 aa11.59□□□□□ -0.55
SFSWAP-201ENST00000261674 Q9H3A6 140 aa11.59□□□□□ -0.55
SFSWAP-201ENST00000261674 CTSZQ9UBR2 303 aa11.59□□□□□ -0.55
SFSWAP-201ENST00000261674 A8MWL6 223 aa11.58□□□□□ -0.56
SFSWAP-201ENST00000261674 HBBP68871 147 aa11.58□□□□□ -0.56
SFSWAP-201ENST00000261674 TEX36Q5VZQ5 186 aa11.58□□□□□ -0.56
SFSWAP-201ENST00000261674 MBD6Q96DN6 1003 aa11.58□□□□□ -0.56
SFSWAP-201ENST00000261674 FBXL15Q9H469 300 aa11.58□□□□□ -0.56
SFSWAP-201ENST00000261674 TMEM178BH3BS89 294 aa11.58□□□□□ -0.56
SFSWAP-201ENST00000261674 TCTAP57738 103 aa11.58□□□□□ -0.56
SFSWAP-201ENST00000261674 INSIG2Q9Y5U4 225 aa11.58□□□□□ -0.56
SFSWAP-201ENST00000261674 CELSR2Q9HCU4 2923 aa11.58□□□□□ -0.56
SFSWAP-201ENST00000261674 HRNRQ86YZ3 2850 aaPredicted RBP11.58□□□□□ -0.56
SFSWAP-201ENST00000261674 hDV102S1A0JD36 115 aa11.58□□□□□ -0.56
SFSWAP-201ENST00000261674 MEF2CQ06413 473 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms