RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 STOML3Q8TAV4 291 aa12.06□□□□□ -0.48
CCDC90B-201ENST00000260054 SLC39A9Q9NUM3 307 aa12.06□□□□□ -0.48
CCDC90B-201ENST00000260054 DOK5Q9P104 306 aa12.06□□□□□ -0.48
CCDC90B-201ENST00000260054 TIMM9Q9Y5J7 89 aa12.06□□□□□ -0.48
CCDC90B-201ENST00000260054 TRRAPQ9Y4A5 3859 aa12.06□□□□□ -0.48
CCDC90B-201ENST00000260054 M0QZ24 198 aa12.05□□□□□ -0.48
CCDC90B-201ENST00000260054 TSPAN4O14817 238 aa12.05□□□□□ -0.48
CCDC90B-201ENST00000260054 ZNF207O43670 478 aaKnown RBP12.05□□□□□ -0.48
CCDC90B-201ENST00000260054 PLP1P60201 277 aa12.05□□□□□ -0.48
CCDC90B-201ENST00000260054 BAP18Q8IXM2 172 aa12.05□□□□□ -0.48
CCDC90B-201ENST00000260054 LINC00482Q8N8I6 264 aa12.05□□□□□ -0.48
CCDC90B-201ENST00000260054 SPATA3Q8NHX4 192 aa12.05□□□□□ -0.48
CCDC90B-201ENST00000260054 GNPNAT1Q96EK6 184 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-201ENST00000260054 PSMG3Q9BT73 122 aaPredicted RBP12.05□□□□□ -0.48
CCDC90B-201ENST00000260054 SLC25A32Q9H2D1 315 aa12.05□□□□□ -0.48
CCDC90B-201ENST00000260054 A8MWP6 167 aa12.04□□□□□ -0.48
CCDC90B-201ENST00000260054 TPT1P13693 172 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-201ENST00000260054 ORM2P19652 201 aa12.04□□□□□ -0.48
CCDC90B-201ENST00000260054 EDN2P20800 178 aa12.04□□□□□ -0.48
CCDC90B-201ENST00000260054 TM4SF20Q53R12 229 aa12.04□□□□□ -0.48
CCDC90B-201ENST00000260054 GCSAMLQ5JQS6 135 aa12.04□□□□□ -0.48
CCDC90B-201ENST00000260054 OR1B1Q8NGR6 318 aa12.04□□□□□ -0.48
CCDC90B-201ENST00000260054 KCNIP2Q9NS61 270 aa12.04□□□□□ -0.48
CCDC90B-201ENST00000260054 TMEM213A2RRL7 107 aa12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 OVOL1O14753 267 aa12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 SPP1P10451 314 aa12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 ELLP55199 621 aaPredicted RBP12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 EIF5AP63241 154 aaKnown RBP12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 FFAR4Q5NUL3 377 aa12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 PATE2Q6UY27 113 aa12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 Q6ZRG5 221 aa12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 OR9G4Q8NGQ1 327 aa12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 TMEM37Q8WXS4 190 aa12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 ST8SIA2Q92186 375 aa12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 DAZ1Q9NQZ3 744 aaKnown RBP12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 MRPL27Q9P0M9 148 aaKnown RBP12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 UFC1Q9Y3C8 167 aa12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 K7EMT4 169 aa12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 BTN1A1Q13410 526 aa12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 IL34Q6ZMJ4 242 aa12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 OR2G3Q8NGZ4 309 aa12.03□□□□□ -0.48
CCDC90B-201ENST00000260054 HYPMO75409 117 aa12.02□□□□□ -0.49
CCDC90B-201ENST00000260054 APOHP02749 345 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-201ENST00000260054 OR5G3P0C626 314 aa12.02□□□□□ -0.49
CCDC90B-201ENST00000260054 UHRF2Q96PU4 802 aa12.02□□□□□ -0.49
CCDC90B-201ENST00000260054 VSIRQ9H7M9 311 aa12.02□□□□□ -0.49
CCDC90B-201ENST00000260054 RABAC1Q9UI14 185 aa12.02□□□□□ -0.49
CCDC90B-201ENST00000260054 IGHV3OR16-13A0A075B7E8 117 aa12.01□□□□□ -0.49
CCDC90B-201ENST00000260054 IGHV3-49A0A0A0MS15 119 aa12.01□□□□□ -0.49
CCDC90B-201ENST00000260054 IGHV3-74A0A0B4J1X5 117 aa12.01□□□□□ -0.49
CCDC90B-201ENST00000260054 C2orf70A6NJV1 201 aa12.01□□□□□ -0.49
CCDC90B-201ENST00000260054 COX7A2P2O60397 106 aa12.01□□□□□ -0.49
CCDC90B-201ENST00000260054 SEC11BP0C7V7 166 aa12.01□□□□□ -0.49
CCDC90B-201ENST00000260054 NPPCP23582 126 aa12.01□□□□□ -0.49
CCDC90B-201ENST00000260054 CRYBB3P26998 211 aa12.01□□□□□ -0.49
CCDC90B-201ENST00000260054 SERF2P84101 59 aa12.01□□□□□ -0.49
CCDC90B-201ENST00000260054 ALKAL2Q6UX46 152 aa12.01□□□□□ -0.49
CCDC90B-201ENST00000260054 ADAMTSL5Q6ZMM2 481 aa12.01□□□□□ -0.49
CCDC90B-201ENST00000260054 METTL26Q96S19 204 aa12.01□□□□□ -0.49
CCDC90B-201ENST00000260054 PLA2G2EQ9NZK7 142 aa12.01□□□□□ -0.49
CCDC90B-201ENST00000260054 PEMTQ9UBM1 199 aa12.01□□□□□ -0.49
CCDC90B-201ENST00000260054 CSN3P07498 182 aa12□□□□□ -0.49
CCDC90B-201ENST00000260054 RAB2AP61019 212 aa12□□□□□ -0.49
CCDC90B-201ENST00000260054 TMED6Q8WW62 240 aa12□□□□□ -0.49
CCDC90B-201ENST00000260054 DNAJC4Q9NNZ3 241 aa12□□□□□ -0.49
CCDC90B-201ENST00000260054 HIGD1AQ9Y241 93 aa12□□□□□ -0.49
CCDC90B-201ENST00000260054 U3KQE9 123 aa12□□□□□ -0.49
CCDC90B-201ENST00000260054 ELOA3CA0A087WX78 387 aaPredicted RBP12□□□□□ -0.49
CCDC90B-201ENST00000260054 IGHV3-66A0A0C4DH42 116 aa12□□□□□ -0.49
CCDC90B-201ENST00000260054 IGHV7-4-1A0A0J9YVY3 117 aa12□□□□□ -0.49
CCDC90B-201ENST00000260054 FOLR2P14207 255 aa12□□□□□ -0.49
CCDC90B-201ENST00000260054 CBLN1P23435 193 aa12□□□□□ -0.49
CCDC90B-201ENST00000260054 MORN5Q5VZ52 161 aa12□□□□□ -0.49
CCDC90B-201ENST00000260054 C10orf113Q5VZT2 155 aa12□□□□□ -0.49
CCDC90B-201ENST00000260054 OR1L4Q8NGR5 311 aa12□□□□□ -0.49
CCDC90B-201ENST00000260054 GATAD1Q8WUU5 269 aa12□□□□□ -0.49
CCDC90B-201ENST00000260054 PFDN5Q99471 154 aa12□□□□□ -0.49
CCDC90B-201ENST00000260054 SLC25A39Q9BZJ4 359 aaPredicted RBP12□□□□□ -0.49
CCDC90B-201ENST00000260054 DNHD1Q96M86 4753 aa11.99□□□□□ -0.49
CCDC90B-201ENST00000260054 H3BRN7 92 aa11.99□□□□□ -0.49
CCDC90B-201ENST00000260054 C8orf88P0DMB2 117 aa11.99□□□□□ -0.49
CCDC90B-201ENST00000260054 ACOT6Q3I5F7 207 aaPredicted RBP11.99□□□□□ -0.49
CCDC90B-201ENST00000260054 LINC00305Q7Z4B0 112 aa11.99□□□□□ -0.49
CCDC90B-201ENST00000260054 SEPSECSQ9HD40 501 aaKnown RBP11.99□□□□□ -0.49
CCDC90B-201ENST00000260054 SMPXQ9UHP9 88 aa11.99□□□□□ -0.49
CCDC90B-201ENST00000260054 BUB3O43684 328 aa11.98□□□□□ -0.49
CCDC90B-201ENST00000260054 SPATA31B1PQ5VZV4 182 aa11.98□□□□□ -0.49
CCDC90B-201ENST00000260054 LEMD1Q68G75 181 aa11.98□□□□□ -0.49
CCDC90B-201ENST00000260054 WFDC9Q8NEX5 89 aa11.98□□□□□ -0.49
CCDC90B-201ENST00000260054 OR10G4Q8NGN3 311 aa11.98□□□□□ -0.49
CCDC90B-201ENST00000260054 OR10G9Q8NGN4 311 aa11.98□□□□□ -0.49
CCDC90B-201ENST00000260054 OR10G7Q8NGN6 311 aa11.98□□□□□ -0.49
CCDC90B-201ENST00000260054 SHANK2-AS3Q9BTD1 123 aa11.98□□□□□ -0.49
CCDC90B-201ENST00000260054 ELOVL1Q9BW60 279 aa11.98□□□□□ -0.49
CCDC90B-201ENST00000260054 RHPN1-AS1Q9BWJ2 59 aa11.98□□□□□ -0.49
CCDC90B-201ENST00000260054 SCRT1Q9BWW7 348 aa11.98□□□□□ -0.49
CCDC90B-201ENST00000260054 RPRMQ9NS64 109 aa11.98□□□□□ -0.49
CCDC90B-201ENST00000260054 SELENOKQ9Y6D0 94 aa11.98□□□□□ -0.49
CCDC90B-201ENST00000260054 CHEK1O14757 476 aa11.97□□□□□ -0.49
CCDC90B-201ENST00000260054 CD33P20138 364 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms