RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 AMMECR1LQ6DCA0 310 aa10.71□□□□□ -0.69
H3F3B-201ENST00000254810 DEFB125Q8N687 156 aa10.71□□□□□ -0.69
H3F3B-201ENST00000254810 TEX45Q8NA69 505 aa10.71□□□□□ -0.69
H3F3B-201ENST00000254810 PERPQ96FX8 193 aa10.71□□□□□ -0.69
H3F3B-201ENST00000254810 SAPCD1Q5SSQ6 148 aa10.71□□□□□ -0.7
H3F3B-201ENST00000254810 LDLRAD2Q5SZI1 272 aa10.71□□□□□ -0.7
H3F3B-201ENST00000254810 TEX36Q5VZQ5 186 aa10.71□□□□□ -0.7
H3F3B-201ENST00000254810 ETFRF1Q6IPR1 90 aa10.71□□□□□ -0.7
H3F3B-201ENST00000254810 RBPMS2Q6ZRY4 209 aaKnown RBP10.71□□□□□ -0.7
H3F3B-201ENST00000254810 OR4C13Q8NGP0 309 aa10.71□□□□□ -0.7
H3F3B-201ENST00000254810 BSNQ9UPA5 3926 aa10.7□□□□□ -0.7
H3F3B-201ENST00000254810 IGLV2-11P01706 119 aa10.7□□□□□ -0.7
H3F3B-201ENST00000254810 CNTFRP26992 372 aa10.7□□□□□ -0.7
H3F3B-201ENST00000254810 EXOC3-AS1Q8N2X6 119 aa10.7□□□□□ -0.7
H3F3B-201ENST00000254810 ZNF492Q9P255 531 aa10.7□□□□□ -0.7
H3F3B-201ENST00000254810 SSUH2Q9Y2M2 353 aa10.7□□□□□ -0.7
H3F3B-201ENST00000254810 FAM215AQ9Y5M1 114 aa10.7□□□□□ -0.7
H3F3B-201ENST00000254810 MBD3L4A6NDZ8 208 aaPredicted RBP10.7□□□□□ -0.7
H3F3B-201ENST00000254810 MBD3L3A6NE82 208 aaPredicted RBP10.7□□□□□ -0.7
H3F3B-201ENST00000254810 MBD3L5A6NJ08 208 aaPredicted RBP10.7□□□□□ -0.7
H3F3B-201ENST00000254810 CRYGCP07315 174 aa10.7□□□□□ -0.7
H3F3B-201ENST00000254810 FAM27E3Q08E93 113 aa10.7□□□□□ -0.7
H3F3B-201ENST00000254810 C5orf17Q8NAS9 161 aa10.7□□□□□ -0.7
H3F3B-201ENST00000254810 OR10X1Q8NGY0 326 aa10.7□□□□□ -0.7
H3F3B-201ENST00000254810 MBD3L2Q8NHZ7 208 aaPredicted RBP10.7□□□□□ -0.7
H3F3B-201ENST00000254810 TACC2O95359 2948 aa10.7□□□□□ -0.7
H3F3B-201ENST00000254810 CT83Q5H943 113 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 PLA2G2CQ5R387 149 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 IGFL2Q6UWQ7 119 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 LYPD2Q6UXB3 125 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 Q86TA4 180 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 FMC1Q96HJ9 113 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 TRAV8-6A0A0B4J262 113 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 TRAV17A0A0B4J275 112 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 NPIPB6E9PJ23 425 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 CHEK1O14757 476 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 FAM106CPP0CH98 169 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 PSG9Q00887 426 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 FAM106AQ4KMX7 169 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 C2orf91Q6ZV80 131 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 NEU4Q8WWR8 484 aaPredicted RBP10.69□□□□□ -0.7
H3F3B-201ENST00000254810 H1FXQ92522 213 aaKnown RBP10.69□□□□□ -0.7
H3F3B-201ENST00000254810 GUCD1Q96NT3 240 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 NDFIP1Q9BT67 221 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 CST9LQ9H4G1 147 aa10.69□□□□□ -0.7
H3F3B-201ENST00000254810 SUB1P53999 127 aaKnown RBP eCLIP10.68□□□□□ -0.72e-7■■■■□ 19.7
H3F3B-201ENST00000254810 PRNTQ86SH4 94 aa10.68□□□□□ -0.7
H3F3B-201ENST00000254810 SMIM12Q96EX1 92 aa10.68□□□□□ -0.7
H3F3B-201ENST00000254810 TMEM191AQ9H0A3 160 aa10.68□□□□□ -0.7
H3F3B-201ENST00000254810 SELENOKQ9Y6D0 94 aa10.68□□□□□ -0.7
H3F3B-201ENST00000254810 ARMS2P0C7Q2 107 aa10.68□□□□□ -0.7
H3F3B-201ENST00000254810 LIPFP07098 398 aa10.67□□□□□ -0.7
H3F3B-201ENST00000254810 SP9P0CG40 484 aa10.67□□□□□ -0.7
H3F3B-201ENST00000254810 COL8A1P27658 744 aa10.67□□□□□ -0.7
H3F3B-201ENST00000254810 GOLT1AQ6ZVE7 132 aa10.67□□□□□ -0.7
H3F3B-201ENST00000254810 OR4A5Q8NH83 315 aa10.67□□□□□ -0.7
H3F3B-201ENST00000254810 DAZAP1Q96EP5 407 aaKnown RBP10.67□□□□□ -0.7
H3F3B-201ENST00000254810 C17orf77Q96MU5 243 aa10.67□□□□□ -0.7
H3F3B-201ENST00000254810 MAP1LC3CQ9BXW4 147 aa10.67□□□□□ -0.7
H3F3B-201ENST00000254810 ENSAO43768 121 aaKnown RBP10.67□□□□□ -0.7
H3F3B-201ENST00000254810 LOXL1Q08397 574 aaPredicted RBP10.67□□□□□ -0.7
H3F3B-201ENST00000254810 TMEM30BQ3MIR4 351 aa10.67□□□□□ -0.7
H3F3B-201ENST00000254810 PET117Q6UWS5 81 aa10.67□□□□□ -0.7
H3F3B-201ENST00000254810 PIP4P2Q8N4L2 257 aa10.67□□□□□ -0.7
H3F3B-201ENST00000254810 ZADH2Q8N4Q0 377 aa10.67□□□□□ -0.7
H3F3B-201ENST00000254810 STXBP6Q8NFX7 210 aa10.67□□□□□ -0.7
H3F3B-201ENST00000254810 VSTM2AQ8TAG5 236 aa10.67□□□□□ -0.7
H3F3B-201ENST00000254810 TRGV9Q99603 122 aa10.67□□□□□ -0.7
H3F3B-201ENST00000254810 GFRA4Q9GZZ7 299 aa10.67□□□□□ -0.7
H3F3B-201ENST00000254810 HAX1O00165 279 aa10.66□□□□□ -0.7
H3F3B-201ENST00000254810 TCTAP57738 103 aa10.66□□□□□ -0.7
H3F3B-201ENST00000254810 ARF6P62330 175 aa10.66□□□□□ -0.7
H3F3B-201ENST00000254810 OCIAD2Q56VL3 154 aa10.66□□□□□ -0.7
H3F3B-201ENST00000254810 FAM162BQ5T6X4 162 aa10.66□□□□□ -0.7
H3F3B-201ENST00000254810 LINC01545Q5VT33 79 aa10.66□□□□□ -0.7
H3F3B-201ENST00000254810 C16orf54Q6UWD8 224 aa10.66□□□□□ -0.7
H3F3B-201ENST00000254810 SOX21Q9Y651 276 aaPredicted RBP10.66□□□□□ -0.7
H3F3B-201ENST00000254810 BDP1A6H8Y1 2624 aa10.66□□□□□ -0.7
H3F3B-201ENST00000254810 PKDREJQ9NTG1 2253 aa10.66□□□□□ -0.7
H3F3B-201ENST00000254810 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.66□□□□□ -0.7
H3F3B-201ENST00000254810 CD40P25942 277 aa10.66□□□□□ -0.7
H3F3B-201ENST00000254810 CTSZQ9UBR2 303 aa10.66□□□□□ -0.7
H3F3B-201ENST00000254810 CEP250Q9BV73 2442 aa10.65□□□□□ -0.7
H3F3B-201ENST00000254810 PPBPP02775 128 aa10.65□□□□□ -0.7
H3F3B-201ENST00000254810 HTR1DP28221 377 aa10.65□□□□□ -0.7
H3F3B-201ENST00000254810 COTL1Q14019 142 aa10.65□□□□□ -0.7
H3F3B-201ENST00000254810 PVRIGQ6DKI7 326 aa10.65□□□□□ -0.7
H3F3B-201ENST00000254810 HSBP1L1C9JCN9 74 aa10.65□□□□□ -0.7
H3F3B-201ENST00000254810 LYZP61626 148 aa10.65□□□□□ -0.7
H3F3B-201ENST00000254810 MEF2CQ06413 473 aaPredicted RBP10.65□□□□□ -0.7
H3F3B-201ENST00000254810 DEFB109BQ30KR1 87 aa10.65□□□□□ -0.7
H3F3B-201ENST00000254810 TMEM116Q8NCL8 245 aa10.65□□□□□ -0.7
H3F3B-201ENST00000254810 C8orf46Q8TAG6 207 aa10.65□□□□□ -0.7
H3F3B-201ENST00000254810 SRSF12Q8WXF0 261 aaKnown RBP10.65□□□□□ -0.7
H3F3B-201ENST00000254810 ZNF747Q9BV97 191 aa10.65□□□□□ -0.7
H3F3B-201ENST00000254810 A0A096LNJ9 63 aa10.64□□□□□ -0.71
H3F3B-201ENST00000254810 OR5AL1P0C617 328 aa10.64□□□□□ -0.71
H3F3B-201ENST00000254810 GPR183P32249 361 aa10.64□□□□□ -0.71
H3F3B-201ENST00000254810 C12orf54Q6X4T0 127 aa10.64□□□□□ -0.71
H3F3B-201ENST00000254810 HLA-DRB1P01911 266 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms