RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 PTTG2Q9NZH5 202 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 A0A0B4J2A0 478 aa7.36□□□□□ -1.23
VPS50-201ENST00000251739 DISC1C4P0D8 188 aa7.36□□□□□ -1.23
VPS50-201ENST00000251739 AKAIN1P0CW23 69 aa7.36□□□□□ -1.23
VPS50-201ENST00000251739 NUP62P37198 522 aaPredicted RBP7.36□□□□□ -1.23
VPS50-201ENST00000251739 ALDH3B2P48448 385 aa7.36□□□□□ -1.23
VPS50-201ENST00000251739 DEFB1P60022 68 aa7.36□□□□□ -1.23
VPS50-201ENST00000251739 NOXA1Q86UR1 476 aa7.36□□□□□ -1.23
VPS50-201ENST00000251739 OR51S1Q8NGJ8 323 aa7.36□□□□□ -1.23
VPS50-201ENST00000251739 OR51G1Q8NGK1 321 aa7.36□□□□□ -1.23
VPS50-201ENST00000251739 DTD1Q8TEA8 209 aa7.36□□□□□ -1.23
VPS50-201ENST00000251739 KRTAP4-12Q9BQ66 201 aa7.36□□□□□ -1.23
VPS50-201ENST00000251739 NDUFAF3Q9BU61 184 aa7.36□□□□□ -1.23
VPS50-201ENST00000251739 WDR12Q9GZL7 423 aaKnown RBP7.36□□□□□ -1.23
VPS50-201ENST00000251739 SHPKQ9UHJ6 478 aa7.36□□□□□ -1.23
VPS50-201ENST00000251739 U3KQ87 197 aa7.36□□□□□ -1.23
VPS50-201ENST00000251739 ANKRD20A5PA0PJZ0 165 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 SMIM9A6NGZ8 99 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 A8MTW9 85 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 RGS5O15539 181 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 P0DMU3 169 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 FAM231AP0DMU4 169 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 FAM231CP0DMU5 169 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 PSMB3P49720 205 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 CCR6P51684 374 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 PAX9P55771 341 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 ATP5IP56385 69 aaPredicted RBP7.35□□□□□ -1.23
VPS50-201ENST00000251739 ZNF79Q15937 498 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 FOXI2Q6ZQN5 318 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 LYZL2Q7Z4W2 148 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 LGI3Q8N145 548 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 KRTAP9-2Q9BYQ4 174 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 RBKSQ9H477 322 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 SAV1Q9H4B6 383 aaPredicted RBP7.35□□□□□ -1.23
VPS50-201ENST00000251739 PLA2G2DQ9UNK4 145 aa7.35□□□□□ -1.23
VPS50-201ENST00000251739 HSPG2P98160 4391 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 IGKV1OR2-108A0A075B7D4 117 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 TMEM189A5PLL7 270 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 PITX3O75364 302 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 IFNA10P01566 189 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 GPX4P36969 197 aaPredicted RBP7.34□□□□□ -1.23
VPS50-201ENST00000251739 ZNF90Q03938 601 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 KLF9Q13886 244 aaPredicted RBP7.34□□□□□ -1.23
VPS50-201ENST00000251739 GAMTQ14353 236 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 SMCO1Q147U7 214 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 LGALS9BQ3B8N2 356 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 C1orf194Q5T5A4 169 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 Q6ZR54 194 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 KRTAP19-1Q8IUB9 90 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 CLVS1Q8IUQ0 354 aaPredicted RBP7.34□□□□□ -1.23
VPS50-201ENST00000251739 CENPSQ8N2Z9 138 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 DYNC2LI1Q8TCX1 351 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 FAM210BQ96KR6 192 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 C17orf77Q96MU5 243 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 SOSTQ9BQB4 213 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 CCDC59Q9P031 241 aaKnown RBP7.34□□□□□ -1.23
VPS50-201ENST00000251739 DKK2Q9UBU2 259 aa7.34□□□□□ -1.23
VPS50-201ENST00000251739 ISLRO14498 428 aa7.33□□□□□ -1.24
VPS50-201ENST00000251739 SPART-AS1P0CW21 52 aa7.33□□□□□ -1.24
VPS50-201ENST00000251739 M6PRP20645 277 aa7.33□□□□□ -1.24
VPS50-201ENST00000251739 CTAG1AP78358 180 aa7.33□□□□□ -1.24
VPS50-201ENST00000251739 IL18Q14116 193 aa7.33□□□□□ -1.24
VPS50-201ENST00000251739 OXA1LQ15070 435 aa7.33□□□□□ -1.24
VPS50-201ENST00000251739 SPATA31B1PQ5VZV4 182 aa7.33□□□□□ -1.24
VPS50-201ENST00000251739 SLC7A5P1Q8MH63 180 aa7.33□□□□□ -1.24
VPS50-201ENST00000251739 DIRAS2Q96HU8 199 aa7.33□□□□□ -1.24
VPS50-201ENST00000251739 PBDC1Q9BVG4 233 aa7.33□□□□□ -1.24
VPS50-201ENST00000251739 SLC35B3Q9H1N7 401 aa7.33□□□□□ -1.24
VPS50-201ENST00000251739 KCNIP3Q9Y2W7 256 aa7.33□□□□□ -1.24
VPS50-201ENST00000251739 RFNGQ9Y644 331 aa7.33□□□□□ -1.24
VPS50-201ENST00000251739 A0A0J9YX75 114 aa7.32□□□□□ -1.24
VPS50-201ENST00000251739 TEX48A0A1B0GUV7 120 aa7.32□□□□□ -1.24
VPS50-201ENST00000251739 ZFP92A6NM28 416 aa7.32□□□□□ -1.24
VPS50-201ENST00000251739 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.32□□□□□ -1.24
VPS50-201ENST00000251739 PRSS46E5RG02 174 aa7.32□□□□□ -1.24
VPS50-201ENST00000251739 SRPXP78539 464 aa7.32□□□□□ -1.24
VPS50-201ENST00000251739 SMUG1Q53HV7 270 aa7.32□□□□□ -1.24
VPS50-201ENST00000251739 AMTNQ6UX39 209 aa7.32□□□□□ -1.24
VPS50-201ENST00000251739 C1orf158Q8N1D5 194 aa7.32□□□□□ -1.24
VPS50-201ENST00000251739 THAP8Q8NA92 274 aa7.32□□□□□ -1.24
VPS50-201ENST00000251739 SLC35E1Q96K37 410 aa7.32□□□□□ -1.24
VPS50-201ENST00000251739 TRGV9Q99603 122 aa7.32□□□□□ -1.24
VPS50-201ENST00000251739 MRPS26Q9BYN8 205 aaKnown RBP7.32□□□□□ -1.24
VPS50-201ENST00000251739 SCP2D1Q9UJQ7 156 aa7.32□□□□□ -1.24
VPS50-201ENST00000251739 LRP1BQ9NZR2 4599 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 DUXBA0A1W2PPF3 345 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 PRSS29PA6NIE9 313 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 F6UB75 175 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 IGKV3-20P01619 116 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 AKR1C4P17516 323 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 ID1P41134 155 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 FXYD7P58549 80 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 LYZP61626 148 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 CNPY1Q3B7I2 92 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 FAM222AQ5U5X8 452 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 FAM78BQ5VT40 261 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 SAMD13Q5VXD3 122 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 GSG1LQ6UXU4 331 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 GPR141Q7Z602 305 aa7.31□□□□□ -1.24
VPS50-201ENST00000251739 LRTM2Q8N967 370 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms