RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 C1QL4Q86Z23 238 aa18.26■□□□□ 0.51
SYNGR3-201ENST00000248121 ZNF48Q96MX3 618 aaPredicted RBP18.26■□□□□ 0.51
SYNGR3-201ENST00000248121 TOMM40O96008 361 aa18.26■□□□□ 0.51
SYNGR3-201ENST00000248121 AMY1AP04745 511 aa18.26■□□□□ 0.51
SYNGR3-201ENST00000248121 HNF1AP20823 631 aa18.26■□□□□ 0.51
SYNGR3-201ENST00000248121 MYCNOSP40205 109 aa18.26■□□□□ 0.51
SYNGR3-201ENST00000248121 STXBP6Q8NFX7 210 aa18.26■□□□□ 0.51
SYNGR3-201ENST00000248121 SLC25A39Q9BZJ4 359 aaPredicted RBP18.26■□□□□ 0.51
SYNGR3-201ENST00000248121 ACANP16112 2415 aa18.25■□□□□ 0.51
SYNGR3-201ENST00000248121 TRBV24-1A0A075B6N3 115 aa18.25■□□□□ 0.51
SYNGR3-201ENST00000248121 MFAP4P55083 255 aa18.25■□□□□ 0.51
SYNGR3-201ENST00000248121 ECSCRQ19T08 205 aa18.25■□□□□ 0.51
SYNGR3-201ENST00000248121 IL17RELQ6ZVW7 336 aa18.25■□□□□ 0.51
SYNGR3-201ENST00000248121 ZNF329Q86UD4 541 aa18.25■□□□□ 0.51
SYNGR3-201ENST00000248121 ZNF491Q8N8L2 437 aa18.25■□□□□ 0.51
SYNGR3-201ENST00000248121 FAM110DQ8TAY7 271 aaPredicted RBP18.25■□□□□ 0.51
SYNGR3-201ENST00000248121 IGHV3-23P01764 117 aa18.24■□□□□ 0.51
SYNGR3-201ENST00000248121 GALR1P47211 349 aa18.24■□□□□ 0.51
SYNGR3-201ENST00000248121 UNQ5815/PRO19632Q6UWF5 114 aa18.24■□□□□ 0.51
SYNGR3-201ENST00000248121 FAM210BQ96KR6 192 aa18.24■□□□□ 0.51
SYNGR3-201ENST00000248121 TMUB1Q9BVT8 246 aa18.24■□□□□ 0.51
SYNGR3-201ENST00000248121 C21orf62Q9NYP8 219 aa18.24■□□□□ 0.51
SYNGR3-201ENST00000248121 MYO9AB2RTY4 2548 aa18.24■□□□□ 0.51
SYNGR3-201ENST00000248121 HELTA6NFD8 242 aa18.24■□□□□ 0.51
SYNGR3-201ENST00000248121 GNG7O60262 68 aa18.24■□□□□ 0.51
SYNGR3-201ENST00000248121 CD99P14209 185 aa18.24■□□□□ 0.51
SYNGR3-201ENST00000248121 KRTAP1-1Q07627 177 aa18.24■□□□□ 0.51
SYNGR3-201ENST00000248121 KLK9Q2XQG4 91 aa18.24■□□□□ 0.51
SYNGR3-201ENST00000248121 THYN1Q9P016 225 aa18.24■□□□□ 0.51
SYNGR3-201ENST00000248121 KLK9Q9UKQ9 250 aa18.24■□□□□ 0.51
SYNGR3-201ENST00000248121 G3V318 75 aa18.23■□□□□ 0.51
SYNGR3-201ENST00000248121 SFRP2Q96HF1 295 aa18.23■□□□□ 0.51
SYNGR3-201ENST00000248121 PYGO2Q9BRQ0 406 aa18.23■□□□□ 0.51
SYNGR3-201ENST00000248121 MOB4Q9Y3A3 225 aa18.23■□□□□ 0.51
SYNGR3-201ENST00000248121 LY96Q9Y6Y9 160 aa18.23■□□□□ 0.51
SYNGR3-201ENST00000248121 YPEL3P61236 119 aaPredicted RBP18.22■□□□□ 0.51
SYNGR3-201ENST00000248121 CENPWQ5EE01 88 aa18.22■□□□□ 0.51
SYNGR3-201ENST00000248121 BLNKQ8WV28 456 aa18.22■□□□□ 0.51
SYNGR3-201ENST00000248121 SAV1Q9H4B6 383 aaPredicted RBP18.22■□□□□ 0.51
SYNGR3-201ENST00000248121 FBXL7Q9UJT9 491 aa18.22■□□□□ 0.51
SYNGR3-201ENST00000248121 TRAV30A0A087WSZ9 112 aa18.22■□□□□ 0.51
SYNGR3-201ENST00000248121 WI2-2373I1.2A0A1W2PRP0 233 aa18.22■□□□□ 0.51
SYNGR3-201ENST00000248121 FABP1P07148 127 aa18.22■□□□□ 0.51
SYNGR3-201ENST00000248121 NBEAP1P0C6P0 100 aa18.22■□□□□ 0.51
SYNGR3-201ENST00000248121 RANP62826 216 aaKnown RBP18.22■□□□□ 0.51
SYNGR3-201ENST00000248121 TEX38Q6PEX7 206 aa18.22■□□□□ 0.51
SYNGR3-201ENST00000248121 RNF125Q96EQ8 232 aa18.22■□□□□ 0.51
SYNGR3-201ENST00000248121 A6NDX4 124 aa18.21■□□□□ 0.51
SYNGR3-201ENST00000248121 IGHV4-59P01825 116 aa18.21■□□□□ 0.51
SYNGR3-201ENST00000248121 Q56UQ5 140 aa18.21■□□□□ 0.51
SYNGR3-201ENST00000248121 ZNF600Q6ZNG1 722 aa18.21■□□□□ 0.51
SYNGR3-201ENST00000248121 LINC00479Q96M42 142 aa18.21■□□□□ 0.51
SYNGR3-201ENST00000248121 SONP18583 2426 aaKnown RBP18.21■□□□□ 0.51
SYNGR3-201ENST00000248121 IL4P05112 153 aa18.21■□□□□ 0.51
SYNGR3-201ENST00000248121 SMUG1Q53HV7 270 aa18.21■□□□□ 0.51
SYNGR3-201ENST00000248121 IGF2BP2-AS1Q96M15 143 aa18.21■□□□□ 0.51
SYNGR3-201ENST00000248121 OR5B12Q96R08 314 aa18.21■□□□□ 0.51
SYNGR3-201ENST00000248121 H3BTX0 84 aa18.2■□□□□ 0.5
SYNGR3-201ENST00000248121 USF2Q15853 346 aaPredicted RBP18.2■□□□□ 0.5
SYNGR3-201ENST00000248121 SHANK2-AS3Q9BTD1 123 aa18.2■□□□□ 0.5
SYNGR3-201ENST00000248121 BIN3Q9NQY0 253 aa18.2■□□□□ 0.5
SYNGR3-201ENST00000248121 H3BRN7 92 aa18.19■□□□□ 0.5
SYNGR3-201ENST00000248121 IGLV2-8P01709 118 aa18.19■□□□□ 0.5
SYNGR3-201ENST00000248121 GNG4P50150 75 aa18.19■□□□□ 0.5
SYNGR3-201ENST00000248121 TMEM14CQ9P0S9 112 aa18.19■□□□□ 0.5
SYNGR3-201ENST00000248121 TRBV9A0A0B4J1U6 114 aa18.19■□□□□ 0.5
SYNGR3-201ENST00000248121 OR2T8A6NH00 312 aa18.19■□□□□ 0.5
SYNGR3-201ENST00000248121 CTSGP08311 255 aa18.19■□□□□ 0.5
SYNGR3-201ENST00000248121 TRGC2P03986 189 aa18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 HIST1H1BP16401 226 aaKnown RBP18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 FCGR2BP31994 310 aaPredicted RBP18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 GNG5P63218 68 aa18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 OR5I1Q13606 314 aa18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 Q6ZS46 218 aa18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 ZNF414Q96IQ9 312 aa18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 ZNF586Q9NXT0 402 aa18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 PEX7O00628 323 aa18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 PPP1R2P9O14990 202 aa18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 GGCTO75223 188 aaKnown RBP18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 S100PP25815 95 aa18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 ADMP35318 185 aa18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 SRP14P37108 136 aaKnown RBP18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 SNRPEP62304 92 aaKnown RBP18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 C15orf32Q32M92 178 aa18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 VN1R17PQ8TDU5 208 aa18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 CHRDL1Q9BU40 450 aa18.18■□□□□ 0.5
SYNGR3-201ENST00000248121 CUBNO60494 3623 aa18.17■□□□□ 0.5
SYNGR3-201ENST00000248121 RHOGP84095 191 aa18.17■□□□□ 0.5
SYNGR3-201ENST00000248121 C19orf54Q5BKX5 351 aa18.17■□□□□ 0.5
SYNGR3-201ENST00000248121 OR10G8Q8NGN5 311 aa18.17■□□□□ 0.5
SYNGR3-201ENST00000248121 TMEM68Q96MH6 324 aa18.17■□□□□ 0.5
SYNGR3-201ENST00000248121 LINC00527Q9UJ94 153 aa18.17■□□□□ 0.5
SYNGR3-201ENST00000248121 NOTCH2Q04721 2471 aa18.17■□□□□ 0.5
SYNGR3-201ENST00000248121 A0A1W2PPQ1 181 aa18.16■□□□□ 0.5
SYNGR3-201ENST00000248121 PGPA6NDG6 321 aa18.16■□□□□ 0.5
SYNGR3-201ENST00000248121 C5orf52A6NGY3 159 aa18.16■□□□□ 0.5
SYNGR3-201ENST00000248121 PHOX2AO14813 284 aa18.16■□□□□ 0.5
SYNGR3-201ENST00000248121 FAM3BP58499 235 aaPredicted RBP18.16■□□□□ 0.5
SYNGR3-201ENST00000248121 ZNF502Q8TBZ5 544 aa18.16■□□□□ 0.5
SYNGR3-201ENST00000248121 CDC42EP3Q9UKI2 254 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms