RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 IGHV2-26A0A0B4J1V2 119 aa16.27■□□□□ 0.19
SOX4-201ENST00000244745 MOB4Q9Y3A3 225 aa16.27■□□□□ 0.19
SOX4-201ENST00000244745 PFN1P07737 140 aaKnown RBP16.26■□□□□ 0.19
SOX4-201ENST00000244745 CD59P13987 128 aa16.26■□□□□ 0.19
SOX4-201ENST00000244745 RHOGP84095 191 aa16.26■□□□□ 0.19
SOX4-201ENST00000244745 DUX3Q96PT4 197 aa16.26■□□□□ 0.19
SOX4-201ENST00000244745 MBNL3Q9NUK0 354 aaKnown RBP16.26■□□□□ 0.19
SOX4-201ENST00000244745 H7C1H1 209 aa16.26■□□□□ 0.19
SOX4-201ENST00000244745 NPIPB5A8MRT5 1133 aa16.26■□□□□ 0.19
SOX4-201ENST00000244745 NCR2O95944 276 aa16.25■□□□□ 0.19
SOX4-201ENST00000244745 GAFA1Q96PS6 74 aa16.25■□□□□ 0.19
SOX4-201ENST00000244745 IGKV1D-17A0A075B6S4 117 aa16.25■□□□□ 0.19
SOX4-201ENST00000244745 CD5LO43866 347 aa16.25■□□□□ 0.19
SOX4-201ENST00000244745 C1orf147Q96MC9 270 aaPredicted RBP16.25■□□□□ 0.19
SOX4-201ENST00000244745 H0YJW9 148 aa16.25■□□□□ 0.19
SOX4-201ENST00000244745 TRAV2A0A0B4J234 112 aa16.25■□□□□ 0.19
SOX4-201ENST00000244745 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.25■□□□□ 0.19
SOX4-201ENST00000244745 PPBPP02775 128 aa16.25■□□□□ 0.19
SOX4-201ENST00000244745 Q0VG73 95 aa16.25■□□□□ 0.19
SOX4-201ENST00000244745 SLC25A15Q9Y619 301 aa16.25■□□□□ 0.19
SOX4-201ENST00000244745 PLXND1Q9Y4D7 1925 aa16.25■□□□□ 0.19
SOX4-201ENST00000244745 COLCA1Q6ZS62 124 aa16.24■□□□□ 0.19
SOX4-201ENST00000244745 CST9LQ9H4G1 147 aa16.24■□□□□ 0.19
SOX4-201ENST00000244745 TDGF1P13385 188 aa16.24■□□□□ 0.19
SOX4-201ENST00000244745 TCRAP04437 139 aa16.24■□□□□ 0.19
SOX4-201ENST00000244745 OCIAD2Q56VL3 154 aa16.24■□□□□ 0.19
SOX4-201ENST00000244745 ZFAND6Q6FIF0 208 aa16.24■□□□□ 0.19
SOX4-201ENST00000244745 SLC25A48Q6ZT89 311 aaKnown RBP16.24■□□□□ 0.19
SOX4-201ENST00000244745 IGHV1-8P0DP01 117 aa16.24■□□□□ 0.19
SOX4-201ENST00000244745 CD7P09564 240 aa16.24■□□□□ 0.19
SOX4-201ENST00000244745 RPL15P61313 204 aaKnown RBP16.24■□□□□ 0.19
SOX4-201ENST00000244745 LIME1Q9H400 295 aa16.24■□□□□ 0.19
SOX4-201ENST00000244745 LSM4Q9Y4Z0 139 aaKnown RBP16.24■□□□□ 0.19
SOX4-201ENST00000244745 ZNF138P52744 262 aa16.23■□□□□ 0.19
SOX4-201ENST00000244745 MLANAQ16655 118 aa16.23■□□□□ 0.19
SOX4-201ENST00000244745 ZNF329Q86UD4 541 aa16.23■□□□□ 0.19
SOX4-201ENST00000244745 RNASE6Q93091 150 aaKnown RBP16.23■□□□□ 0.19
SOX4-201ENST00000244745 TRAV12-3A0A0B4J271 114 aa16.23■□□□□ 0.19
SOX4-201ENST00000244745 MDS2Q8NDY4 140 aa16.23■□□□□ 0.19
SOX4-201ENST00000244745 PAX2Q02962 417 aa16.22■□□□□ 0.19
SOX4-201ENST00000244745 LYZL1Q6UWQ5 148 aa16.22■□□□□ 0.19
SOX4-201ENST00000244745 IGHV1-3A0A0C4DH29 117 aa16.22■□□□□ 0.19
SOX4-201ENST00000244745 CDPF1Q6NVV7 123 aa16.22■□□□□ 0.19
SOX4-201ENST00000244745 TRGV9Q99603 122 aa16.22■□□□□ 0.19
SOX4-201ENST00000244745 Q6ZWC4 215 aa16.22■□□□□ 0.19
SOX4-201ENST00000244745 RPRMLQ8N4K4 120 aa16.22■□□□□ 0.19
SOX4-201ENST00000244745 ITLN2Q8WWU7 325 aaPredicted RBP16.22■□□□□ 0.19
SOX4-201ENST00000244745 SMPXQ9UHP9 88 aa16.22■□□□□ 0.19
SOX4-201ENST00000244745 PAX9P55771 341 aa16.21■□□□□ 0.19
SOX4-201ENST00000244745 TNFRSF14Q92956 283 aa16.21■□□□□ 0.19
SOX4-201ENST00000244745 TMEM167AQ8TBQ9 72 aa16.21■□□□□ 0.19
SOX4-201ENST00000244745 WFDC12Q8WWY7 111 aa16.21■□□□□ 0.19
SOX4-201ENST00000244745 HELZP42694 1942 aaKnown RBP16.21■□□□□ 0.19
SOX4-201ENST00000244745 TMEM178BH3BS89 294 aa16.21■□□□□ 0.19
SOX4-201ENST00000244745 KLRD1Q13241 179 aa16.21■□□□□ 0.19
SOX4-201ENST00000244745 ORMDL2Q53FV1 153 aa16.21■□□□□ 0.19
SOX4-201ENST00000244745 FAM168AQ92567 244 aa16.21■□□□□ 0.19
SOX4-201ENST00000244745 H3BRM9 83 aa16.21■□□□□ 0.19
SOX4-201ENST00000244745 LAGE3Q14657 143 aa16.21■□□□□ 0.19
SOX4-201ENST00000244745 THBDP07204 575 aa16.21■□□□□ 0.18
SOX4-201ENST00000244745 ZNF726P1Q15940 193 aa16.21■□□□□ 0.18
SOX4-201ENST00000244745 WNT2P09544 360 aa16.2■□□□□ 0.18
SOX4-201ENST00000244745 TRAV21A0A0B4J279 112 aa16.2■□□□□ 0.18
SOX4-201ENST00000244745 ADAMTSL5Q6ZMM2 481 aa16.2■□□□□ 0.18
SOX4-201ENST00000244745 THADAQ6YHU6 1953 aa16.2■□□□□ 0.18
SOX4-201ENST00000244745 PRTN3P24158 256 aa16.2■□□□□ 0.18
SOX4-201ENST00000244745 TMEM101Q96IK0 257 aa16.2■□□□□ 0.18
SOX4-201ENST00000244745 C7orf69Q9H7B7 122 aa16.2■□□□□ 0.18
SOX4-201ENST00000244745 GAGE1Q13065 139 aa16.19■□□□□ 0.18
SOX4-201ENST00000244745 F2Z2F3 143 aa16.19■□□□□ 0.18
SOX4-201ENST00000244745 CD300EQ496F6 205 aaPredicted RBP16.19■□□□□ 0.18
SOX4-201ENST00000244745 LINC00479Q96M42 142 aa16.19■□□□□ 0.18
SOX4-201ENST00000244745 IGKV3D-20A0A0C4DH25 116 aa16.19■□□□□ 0.18
SOX4-201ENST00000244745 SH2D1AO60880 128 aa16.19■□□□□ 0.18
SOX4-201ENST00000244745 TMEM155Q4W5P6 130 aa16.19■□□□□ 0.18
SOX4-201ENST00000244745 RNASE2P10153 161 aaKnown RBP16.19■□□□□ 0.18
SOX4-201ENST00000244745 LINC01587Q99440 93 aa16.19■□□□□ 0.18
SOX4-201ENST00000244745 SRD5A1P18405 259 aa16.18■□□□□ 0.18
SOX4-201ENST00000244745 SIGLEC15Q6ZMC9 328 aa16.18■□□□□ 0.18
SOX4-201ENST00000244745 GAGE2BQ13066 116 aa16.18■□□□□ 0.18
SOX4-201ENST00000244745 GAGE2EQ4V326 116 aa16.18■□□□□ 0.18
SOX4-201ENST00000244745 GAGE2DQ9UEU5 116 aa16.18■□□□□ 0.18
SOX4-201ENST00000244745 TRAV8-1A0A0A6YYK1 113 aa16.18■□□□□ 0.18
SOX4-201ENST00000244745 A0A1B0GWJ7 208 aa16.18■□□□□ 0.18
SOX4-201ENST00000244745 FAM231BA6NCW3 169 aa16.18■□□□□ 0.18
SOX4-201ENST00000244745 WIPF3A6NGB9 483 aa16.18■□□□□ 0.18
SOX4-201ENST00000244745 LINC00527Q9UJ94 153 aa16.18■□□□□ 0.18
SOX4-201ENST00000244745 KLF2Q9Y5W3 355 aaPredicted RBP16.17■□□□□ 0.18
SOX4-201ENST00000244745 ZNRD1Q9P1U0 126 aa16.17■□□□□ 0.18
SOX4-201ENST00000244745 IGKV1-16P04430 117 aa16.17■□□□□ 0.18
SOX4-201ENST00000244745 VMO1Q7Z5L0 202 aa16.17■□□□□ 0.18
SOX4-201ENST00000244745 SMAD7O15105 426 aaKnown RBP16.17■□□□□ 0.18
SOX4-201ENST00000244745 KLF17Q5JT82 389 aaPredicted RBP16.17■□□□□ 0.18
SOX4-201ENST00000244745 IGHV3-64A0A075B6Q5 118 aa16.16■□□□□ 0.18
SOX4-201ENST00000244745 IGLC2P0DOY2 106 aa16.16■□□□□ 0.18
SOX4-201ENST00000244745 IGLC3P0DOY3 106 aa16.16■□□□□ 0.18
SOX4-201ENST00000244745 SRSF6Q13247 344 aaKnown RBP16.16■□□□□ 0.18
SOX4-201ENST00000244745 PSG3Q16557 428 aa16.16■□□□□ 0.18
SOX4-201ENST00000244745 SVILO95425 2214 aa16.16■□□□□ 0.18
SOX4-201ENST00000244745 IGFL4Q6B9Z1 124 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms