RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 TOMM40O96008 361 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 GNG4P50150 75 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 FABP9Q0Z7S8 132 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 LEMD1Q68G75 181 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 OR10G8Q8NGN5 311 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 FRZBQ92765 325 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 FABP1P07148 127 aa12.52□□□□□ -0.4
ITGA4-201ENST00000233573 ZNF491Q8N8L2 437 aa12.52□□□□□ -0.4
ITGA4-201ENST00000233573 SGMS2Q8NHU3 365 aa12.52□□□□□ -0.4
ITGA4-201ENST00000233573 TCEAL7Q9BRU2 100 aa12.52□□□□□ -0.4
ITGA4-201ENST00000233573 HIF1ANQ9NWT6 349 aa12.52□□□□□ -0.4
ITGA4-201ENST00000233573 TMEM14CQ9P0S9 112 aa12.52□□□□□ -0.4
ITGA4-201ENST00000233573 CDC42EP3Q9UKI2 254 aa12.52□□□□□ -0.4
ITGA4-201ENST00000233573 S4R3C0 116 aa12.52□□□□□ -0.4
ITGA4-201ENST00000233573 WI2-2373I1.2A0A1W2PRP0 233 aa12.52□□□□□ -0.41
ITGA4-201ENST00000233573 RNF223E7ERA6 249 aa12.52□□□□□ -0.41
ITGA4-201ENST00000233573 NDUFB8O95169 186 aa12.52□□□□□ -0.41
ITGA4-201ENST00000233573 NBEAP1P0C6P0 100 aa12.52□□□□□ -0.41
ITGA4-201ENST00000233573 IGHV4-38-2P0DP08 117 aa12.52□□□□□ -0.41
ITGA4-201ENST00000233573 FAM3BP58499 235 aaPredicted RBP12.52□□□□□ -0.41
ITGA4-201ENST00000233573 YPEL3P61236 119 aaPredicted RBP12.52□□□□□ -0.41
ITGA4-201ENST00000233573 Q5PR19 223 aa12.52□□□□□ -0.41
ITGA4-201ENST00000233573 KCNIP4Q6PIL6 250 aa12.52□□□□□ -0.41
ITGA4-201ENST00000233573 PIFOQ8TCI5 191 aa12.52□□□□□ -0.41
ITGA4-201ENST00000233573 BEX4Q9NWD9 120 aaPredicted RBP12.52□□□□□ -0.41
ITGA4-201ENST00000233573 SOX21Q9Y651 276 aaPredicted RBP12.52□□□□□ -0.41
ITGA4-201ENST00000233573 TRAV30A0A087WSZ9 112 aa12.51□□□□□ -0.41
ITGA4-201ENST00000233573 B4DSR2 109 aa12.51□□□□□ -0.41
ITGA4-201ENST00000233573 GCGP01275 180 aa12.51□□□□□ -0.41
ITGA4-201ENST00000233573 SNRPCP09234 159 aaKnown RBP12.51□□□□□ -0.41
ITGA4-201ENST00000233573 TRGC1P0CF51 173 aa12.51□□□□□ -0.41
ITGA4-201ENST00000233573 MFAP4P55083 255 aa12.51□□□□□ -0.41
ITGA4-201ENST00000233573 TAS2R60P59551 318 aa12.51□□□□□ -0.41
ITGA4-201ENST00000233573 OR5I1Q13606 314 aa12.51□□□□□ -0.41
ITGA4-201ENST00000233573 C7orf69Q9H7B7 122 aa12.51□□□□□ -0.41
ITGA4-201ENST00000233573 PEX7O00628 323 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 MEOX2P50222 304 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 RANP62826 216 aaKnown RBP12.5□□□□□ -0.41
ITGA4-201ENST00000233573 ZNF600Q6ZNG1 722 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 FAM110DQ8TAY7 271 aaPredicted RBP12.5□□□□□ -0.41
ITGA4-201ENST00000233573 LINC00479Q96M42 142 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 SHANK2-AS3Q9BTD1 123 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 CR1P17927 2039 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 PPP5D1E7EU14 171 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 H3BRN7 92 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 ATP6V0E1O15342 81 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 GNG7O60262 68 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 AVPP01185 164 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 C5orf56Q8N8D9 126 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 BLNKQ8WV28 456 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 RNF125Q96EQ8 232 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 MEGF9Q9H1U4 602 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 C21orf62Q9NYP8 219 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 THYN1Q9P016 225 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 V9GYV3 84 aa12.5□□□□□ -0.41
ITGA4-201ENST00000233573 OR2J3O76001 311 aa12.49□□□□□ -0.41
ITGA4-201ENST00000233573 HOXA5P20719 270 aa12.49□□□□□ -0.41
ITGA4-201ENST00000233573 FCGR2BP31994 310 aaPredicted RBP12.49□□□□□ -0.41
ITGA4-201ENST00000233573 LINC01548A6NM66 108 aa12.49□□□□□ -0.41
ITGA4-201ENST00000233573 SLC17A3O00476 420 aa12.49□□□□□ -0.41
ITGA4-201ENST00000233573 KRTAP1-3Q8IUG1 177 aa12.49□□□□□ -0.41
ITGA4-201ENST00000233573 ZNF586Q9NXT0 402 aa12.49□□□□□ -0.41
ITGA4-201ENST00000233573 IL36BQ9NZH7 164 aa12.49□□□□□ -0.41
ITGA4-201ENST00000233573 EPDR1Q9UM22 224 aa12.49□□□□□ -0.41
ITGA4-201ENST00000233573 A0A0U1RQK1 487 aa12.48□□□□□ -0.41
ITGA4-201ENST00000233573 PGPA6NDG6 321 aa12.48□□□□□ -0.41
ITGA4-201ENST00000233573 IL4P05112 153 aa12.48□□□□□ -0.41
ITGA4-201ENST00000233573 CNN1P51911 297 aaKnown RBP12.48□□□□□ -0.41
ITGA4-201ENST00000233573 NDUFA6P56556 154 aa12.48□□□□□ -0.41
ITGA4-201ENST00000233573 GNG5P63218 68 aa12.48□□□□□ -0.41
ITGA4-201ENST00000233573 OSTCQ9NRP0 149 aa12.48□□□□□ -0.41
ITGA4-201ENST00000233573 KLF12Q9Y4X4 402 aa12.48□□□□□ -0.41
ITGA4-201ENST00000233573 ITPR2Q14571 2701 aa12.48□□□□□ -0.41
ITGA4-201ENST00000233573 MRPS12O15235 138 aaKnown RBP12.47□□□□□ -0.41
ITGA4-201ENST00000233573 AMY1AP04745 511 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 HIST1H1EP10412 219 aaKnown RBP12.47□□□□□ -0.41
ITGA4-201ENST00000233573 HIST1H1BP16401 226 aaKnown RBP12.47□□□□□ -0.41
ITGA4-201ENST00000233573 ERVFC1-1P60608 527 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 RPL15P61313 204 aaKnown RBP12.47□□□□□ -0.41
ITGA4-201ENST00000233573 USF2Q15853 346 aaPredicted RBP12.47□□□□□ -0.41
ITGA4-201ENST00000233573 ACTL10Q5JWF8 245 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 UNQ5815/PRO19632Q6UWF5 114 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 BCL6BQ8N143 479 aaPredicted RBP12.47□□□□□ -0.41
ITGA4-201ENST00000233573 LRRC75A-AS1Q8N1F1 130 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 LINC01356Q8N9X3 169 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 VN1R17PQ8TDU5 208 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 ZNF414Q96IQ9 312 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 Q96MF0 132 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 ZMAT5Q9UDW3 170 aaKnown RBP12.47□□□□□ -0.41
ITGA4-201ENST00000233573 FBXL7Q9UJT9 491 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 PDZD2O15018 2839 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 TRBV9A0A0B4J1U6 114 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 SH2D7A6NKC9 451 aaPredicted RBP12.47□□□□□ -0.41
ITGA4-201ENST00000233573 H3BTX0 84 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 ISLRO14498 428 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 CTSGP08311 255 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 TMEM183BQ1AE95 376 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 Q56UQ5 140 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 LURAP1LQ8IV03 231 aa12.47□□□□□ -0.41
ITGA4-201ENST00000233573 C5orf17Q8NAS9 161 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms