RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 FXYD7P58549 80 aa12.74□□□□□ -0.37
DDX1-201ENST00000233084 RBMXL3Q8N7X1 1067 aaKnown RBP12.74□□□□□ -0.37
DDX1-201ENST00000233084 NEU4Q8WWR8 484 aaPredicted RBP12.74□□□□□ -0.37
DDX1-201ENST00000233084 ZNF747Q9BV97 191 aa12.74□□□□□ -0.37
DDX1-201ENST00000233084 LINC00470Q9BZP3 86 aa12.74□□□□□ -0.37
DDX1-201ENST00000233084 SMPXQ9UHP9 88 aa12.74□□□□□ -0.37
DDX1-201ENST00000233084 ITPR1Q14643 2758 aa12.74□□□□□ -0.37
DDX1-201ENST00000233084 GAGE12HA6NDE8 117 aa12.74□□□□□ -0.37
DDX1-201ENST00000233084 P01737 135 aa12.74□□□□□ -0.37
DDX1-201ENST00000233084 SLC25A5P05141 298 aaKnown RBP12.74□□□□□ -0.37
DDX1-201ENST00000233084 NMUP48645 174 aa12.74□□□□□ -0.37
DDX1-201ENST00000233084 SAMD5Q5TGI4 173 aa12.74□□□□□ -0.37
DDX1-201ENST00000233084 Q6ZS92 163 aa12.74□□□□□ -0.37
DDX1-201ENST00000233084 AP5S1Q9NUS5 200 aa12.74□□□□□ -0.37
DDX1-201ENST00000233084 TLN1Q9Y490 2541 aaKnown RBP12.73□□□□□ -0.37
DDX1-201ENST00000233084 MAP1BP46821 2468 aaKnown RBP12.73□□□□□ -0.37
DDX1-201ENST00000233084 TRAV26-1A0A087WT03 109 aa12.73□□□□□ -0.37
DDX1-201ENST00000233084 A8MWL6 223 aa12.73□□□□□ -0.37
DDX1-201ENST00000233084 FNDC10F2Z333 226 aa12.73□□□□□ -0.37
DDX1-201ENST00000233084 MGST3O14880 152 aa12.73□□□□□ -0.37
DDX1-201ENST00000233084 FCGR2BP31994 310 aaPredicted RBP12.73□□□□□ -0.37
DDX1-201ENST00000233084 CKS1BP61024 79 aa12.73□□□□□ -0.37
DDX1-201ENST00000233084 SSBP2P81877 361 aaPredicted RBP12.73□□□□□ -0.37
DDX1-201ENST00000233084 ABHD17AQ96GS6 310 aa12.73□□□□□ -0.37
DDX1-201ENST00000233084 SVILO95425 2214 aa12.73□□□□□ -0.37
DDX1-201ENST00000233084 C15orf65H3BRN8 121 aa12.73□□□□□ -0.37
DDX1-201ENST00000233084 H3BTX0 84 aa12.73□□□□□ -0.37
DDX1-201ENST00000233084 MOSP00540 346 aa12.73□□□□□ -0.37
DDX1-201ENST00000233084 FAM106CPP0CH98 169 aa12.73□□□□□ -0.37
DDX1-201ENST00000233084 PSG3Q16557 428 aa12.73□□□□□ -0.37
DDX1-201ENST00000233084 FAM106AQ4KMX7 169 aa12.73□□□□□ -0.37
DDX1-201ENST00000233084 ADAMTSL5Q6ZMM2 481 aa12.73□□□□□ -0.37
DDX1-201ENST00000233084 SPRR3Q9UBC9 169 aa12.73□□□□□ -0.37
DDX1-201ENST00000233084 COX7A2P2O60397 106 aa12.72□□□□□ -0.37
DDX1-201ENST00000233084 UCNP55089 124 aa12.72□□□□□ -0.37
DDX1-201ENST00000233084 PCP2Q8IVA1 136 aa12.72□□□□□ -0.37
DDX1-201ENST00000233084 TMEM14BQ9NUH8 114 aa12.72□□□□□ -0.37
DDX1-201ENST00000233084 PRB4P10163 310 aaPredicted RBP12.72□□□□□ -0.37
DDX1-201ENST00000233084 CCDC144NLQ6NUI1 221 aa12.72□□□□□ -0.37
DDX1-201ENST00000233084 PRSS3P2Q8NHM4 247 aa12.72□□□□□ -0.37
DDX1-201ENST00000233084 ARFGEF3Q5TH69 2177 aa12.72□□□□□ -0.37
DDX1-201ENST00000233084 IGKV3D-15A0A087WSY6 115 aa12.71□□□□□ -0.37
DDX1-201ENST00000233084 TRGV5A0A0B4J1U4 118 aa12.71□□□□□ -0.37
DDX1-201ENST00000233084 K7ERJ3 54 aa12.71□□□□□ -0.37
DDX1-201ENST00000233084 SMAD7O15105 426 aaKnown RBP12.71□□□□□ -0.37
DDX1-201ENST00000233084 DAZAP1Q96EP5 407 aaKnown RBP12.71□□□□□ -0.37
DDX1-201ENST00000233084 NDFIP1Q9BT67 221 aa12.71□□□□□ -0.37
DDX1-201ENST00000233084 FZR1Q9UM11 496 aa12.71□□□□□ -0.37
DDX1-201ENST00000233084 INSIG2Q9Y5U4 225 aa12.71□□□□□ -0.37
DDX1-201ENST00000233084 LOC389332A0A1B0GUA5 103 aa12.71□□□□□ -0.38
DDX1-201ENST00000233084 PGPA6NDG6 321 aa12.71□□□□□ -0.38
DDX1-201ENST00000233084 K7EMI3 77 aa12.71□□□□□ -0.38
DDX1-201ENST00000233084 IGHG3P01860 377 aa12.71□□□□□ -0.38
DDX1-201ENST00000233084 SCGB1A1P11684 91 aa12.71□□□□□ -0.38
DDX1-201ENST00000233084 CD300EQ496F6 205 aaPredicted RBP12.71□□□□□ -0.38
DDX1-201ENST00000233084 FOXA2Q9Y261 457 aaPredicted RBP12.71□□□□□ -0.38
DDX1-201ENST00000233084 PRR14LQ5THK1 2151 aa12.7□□□□□ -0.38
DDX1-201ENST00000233084 GCSHP23434 173 aa12.7□□□□□ -0.38
DDX1-201ENST00000233084 RBPMS2Q6ZRY4 209 aaKnown RBP12.7□□□□□ -0.38
DDX1-201ENST00000233084 FA2HQ7L5A8 372 aa12.7□□□□□ -0.38
DDX1-201ENST00000233084 BOD1L2Q8IYS8 172 aa12.7□□□□□ -0.38
DDX1-201ENST00000233084 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
DDX1-201ENST00000233084 IFI27L2Q9H2X8 130 aa12.7□□□□□ -0.38
DDX1-201ENST00000233084 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.7□□□□□ -0.38
DDX1-201ENST00000233084 MPV17P39210 176 aa12.7□□□□□ -0.38
DDX1-201ENST00000233084 CRYBA4P53673 196 aa12.7□□□□□ -0.38
DDX1-201ENST00000233084 CACNG7P62955 275 aa12.7□□□□□ -0.38
DDX1-201ENST00000233084 LOXL1Q08397 574 aaPredicted RBP12.7□□□□□ -0.38
DDX1-201ENST00000233084 TBC1D28Q2M2D7 210 aa12.7□□□□□ -0.38
DDX1-201ENST00000233084 C19orf24Q9BVV8 132 aa12.7□□□□□ -0.38
DDX1-201ENST00000233084 TEX50A0A1B0GTY4 177 aa12.69□□□□□ -0.38
DDX1-201ENST00000233084 CSN1S1P47710 185 aa12.69□□□□□ -0.38
DDX1-201ENST00000233084 C10orf113Q5VZT2 155 aa12.69□□□□□ -0.38
DDX1-201ENST00000233084 C11orf53Q8IXP5 236 aa12.69□□□□□ -0.38
DDX1-201ENST00000233084 MTURNQ8N3F0 131 aa12.69□□□□□ -0.38
DDX1-201ENST00000233084 GPR82Q96P67 336 aa12.69□□□□□ -0.38
DDX1-201ENST00000233084 EPDR1Q9UM22 224 aa12.69□□□□□ -0.38
DDX1-201ENST00000233084 WFDC2Q14508 124 aa12.69□□□□□ -0.38
DDX1-201ENST00000233084 MRPL32Q9BYC8 188 aaKnown RBP12.69□□□□□ -0.38
DDX1-201ENST00000233084 TIMM23BQ5SRD1 257 aa12.68□□□□□ -0.38
DDX1-201ENST00000233084 Q71RC1 249 aaPredicted RBP12.68□□□□□ -0.38
DDX1-201ENST00000233084 CD177Q8N6Q3 437 aa12.68□□□□□ -0.38
DDX1-201ENST00000233084 TPPP3Q9BW30 176 aa12.68□□□□□ -0.38
DDX1-201ENST00000233084 TANC2Q9HCD6 1990 aa12.68□□□□□ -0.38
DDX1-201ENST00000233084 SMIM13P0DJ93 91 aa12.68□□□□□ -0.38
DDX1-201ENST00000233084 SH2D6Q7Z4S9 175 aa12.68□□□□□ -0.38
DDX1-201ENST00000233084 PDPNQ86YL7 162 aa12.68□□□□□ -0.38
DDX1-201ENST00000233084 FXYD5Q96DB9 178 aa12.68□□□□□ -0.38
DDX1-201ENST00000233084 C18orf15Q96N68 181 aa12.68□□□□□ -0.38
DDX1-201ENST00000233084 IFI27P40305 119 aaPredicted RBP12.68□□□□□ -0.38
DDX1-201ENST00000233084 PATE2Q6UY27 113 aa12.68□□□□□ -0.38
DDX1-201ENST00000233084 WFDC3Q8IUB2 231 aa12.68□□□□□ -0.38
DDX1-201ENST00000233084 ITLN1Q8WWA0 313 aa12.68□□□□□ -0.38
DDX1-201ENST00000233084 TRAV8-1A0A0A6YYK1 113 aa12.67□□□□□ -0.38
DDX1-201ENST00000233084 COL8A1P27658 744 aa12.67□□□□□ -0.38
DDX1-201ENST00000233084 STXBP6Q8NFX7 210 aa12.67□□□□□ -0.38
DDX1-201ENST00000233084 DDB2Q92466 427 aa12.67□□□□□ -0.38
DDX1-201ENST00000233084 ASCL2Q99929 193 aa12.67□□□□□ -0.38
DDX1-201ENST00000233084 ZNF71Q9NQZ8 489 aaPredicted RBP12.67□□□□□ -0.38
DDX1-201ENST00000233084 K7EQM0 130 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms