RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 GGTLC1Q9BX51 225 aa9.41□□□□□ -0.9
TNFAIP1-201ENST00000226225 OR51B2Q9Y5P1 312 aa9.41□□□□□ -0.9
TNFAIP1-201ENST00000226225 FAM90A26D6RGX4 464 aa9.41□□□□□ -0.9
TNFAIP1-201ENST00000226225 M0R2Z0 102 aa9.41□□□□□ -0.9
TNFAIP1-201ENST00000226225 SMAD7O15105 426 aaKnown RBP9.41□□□□□ -0.9
TNFAIP1-201ENST00000226225 STPG3Q8N7X2 389 aa9.41□□□□□ -0.9
TNFAIP1-201ENST00000226225 NABP2Q9BQ15 211 aa9.41□□□□□ -0.9
TNFAIP1-201ENST00000226225 BET1LQ9NYM9 111 aa9.41□□□□□ -0.9
TNFAIP1-201ENST00000226225 SRRM4A7MD48 611 aaKnown RBP9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 CD99P14209 185 aa9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 PRTN3P24158 256 aa9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 MC5RP33032 325 aa9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 FOXA3P55318 350 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 MLANAQ16655 118 aa9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 TIGITQ495A1 244 aa9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 C10orf55Q5SWW7 151 aa9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 H0YJW9 148 aa9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 ZNF324O75467 553 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 CA2P00918 260 aa9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 LMO4P61968 165 aa9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 RBX1P62877 108 aa9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 RPL8P62917 257 aaKnown RBP9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 ZNF738Q8NE65 137 aa9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 KCNS1Q96KK3 526 aa9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 FBXL15Q9H469 300 aa9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 HIF1ANQ9NWT6 349 aa9.4□□□□□ -0.9
TNFAIP1-201ENST00000226225 TRAV40A0A0B4J280 105 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 APCSP02743 223 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 TSPOP30536 169 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 C10orf105Q8TEF2 133 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 ZNF355PQ9NSJ1 428 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 SLC45A2Q9UMX9 530 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 TCF19Q9Y242 345 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 SVEP1Q4LDE5 3571 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 IGHV1-3A0A0C4DH29 117 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 REG1AP05451 166 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 STAG3L2P0CL84 134 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 STAG3L3P0CL85 134 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 MFAP2P55001 183 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 SELENOTP62341 195 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 LDLRAD2Q5SZI1 272 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 Q8N7P7 452 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 ZNF331Q9NQX6 463 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 BMPR1BO00238 502 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 CNTFRP26992 372 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 DLX6P56179 175 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 SLAQ13239 276 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 KIR3DL3Q8N743 410 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 Q8N976 141 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 TSKUQ8WUA8 353 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 V9GYV3 84 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 MTORP42345 2549 aa9.39□□□□□ -0.91
TNFAIP1-201ENST00000226225 ITGB1BP1O14713 200 aa9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 FBLN7Q53RD9 439 aa9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 CDC42EP3Q9UKI2 254 aa9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 IGHV2-70DA0A0C4DH43 119 aa9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 Q5PR19 223 aa9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 IBA57Q5T440 356 aaKnown RBP9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 RUSC1-AS1Q66K80 236 aa9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 VSTM2AQ8TAG5 236 aa9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 OSR1Q8TAX0 266 aaPredicted RBP9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 CSMD1Q96PZ7 3565 aa9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 M0R1W7 72 aa9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 HSPE1P61604 102 aaKnown RBP9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 HCP5Q6MZN7 132 aa9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 ZNF833PQ6ZTB9 187 aa9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 OR10W1Q8NGF6 305 aa9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 OR2D3Q8NGH3 330 aa9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 RITA1Q96K30 269 aa9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 PRNDQ9UKY0 176 aa9.38□□□□□ -0.91
TNFAIP1-201ENST00000226225 IGHV3-21A0A0B4J1V1 117 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 hDV102S1A0JD36 115 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 RHOBP62745 196 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 UBE2V1Q13404 147 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 MPV17L2Q567V2 206 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 NIT1Q86X76 327 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 KLHDC1Q8N7A1 406 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 LINC00574Q9H8X3 128 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 TRAV5A0A0B4J249 113 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 ZNF137PP52743 207 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 ERHP84090 104 aaKnown RBP9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 TMEM136Q6ZRR5 245 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 PDPNQ86YL7 162 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 OR2T6Q8NHC8 308 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 COX11Q9Y6N1 276 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 NDUFS8O00217 210 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 GOSR1O95249 250 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 SAA4P35542 130 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 TPSG1Q9NRR2 321 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 NAV3Q8IVL0 2385 aa9.37□□□□□ -0.91
TNFAIP1-201ENST00000226225 UBR5O95071 2799 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP1-201ENST00000226225 MYO9AB2RTY4 2548 aa9.36□□□□□ -0.91
TNFAIP1-201ENST00000226225 MT-CO2P00403 227 aa9.36□□□□□ -0.91
TNFAIP1-201ENST00000226225 PSG1P11464 419 aa9.36□□□□□ -0.91
TNFAIP1-201ENST00000226225 IGLL1P15814 213 aa9.36□□□□□ -0.91
TNFAIP1-201ENST00000226225 CCDC144NLQ6NUI1 221 aa9.36□□□□□ -0.91
TNFAIP1-201ENST00000226225 TEPPQ6URK8 271 aa9.36□□□□□ -0.91
TNFAIP1-201ENST00000226225 OR5AN1Q8NGI8 311 aa9.36□□□□□ -0.91
TNFAIP1-201ENST00000226225 TNFRSF14Q92956 283 aa9.36□□□□□ -0.91
TNFAIP1-201ENST00000226225 Q96MF0 132 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms