RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 LOC105371242A0A075B767 164 aa17.43■□□□□ 0.38
SMARCD2-201ENST00000225742 C19orf71A6NCJ1 209 aa17.43■□□□□ 0.38
SMARCD2-201ENST00000225742 C1orf122Q6ZSJ8 110 aa17.43■□□□□ 0.38
SMARCD2-201ENST00000225742 S100A7AQ86SG5 101 aa17.43■□□□□ 0.38
SMARCD2-201ENST00000225742 GSX1Q9H4S2 264 aaPredicted RBP17.43■□□□□ 0.38
SMARCD2-201ENST00000225742 TBL2Q9Y4P3 447 aaKnown RBP17.43■□□□□ 0.38
SMARCD2-201ENST00000225742 A0A1B0GXF2 115 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 FAM231BA6NCW3 169 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 HIGD1CA8MV81 97 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 K7EIM0 57 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 ZNF324O75467 553 aaPredicted RBP17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 IGKV1-17P01599 117 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 AMTP48728 403 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 SLAQ13239 276 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 SHANK2-AS3Q9BTD1 123 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 NRN1Q9NPD7 142 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 TRAV30A0A087WSZ9 112 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 SSTP61278 116 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 ARF6P62330 175 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 LDLRAD2Q5SZI1 272 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 C18orf32Q8TCD1 76 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 FBXL7Q9UJT9 491 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 RPH3ALQ9UNE2 315 aa17.42■□□□□ 0.38
SMARCD2-201ENST00000225742 OOSP1A8MZH6 123 aa17.41■□□□□ 0.38
SMARCD2-201ENST00000225742 P01737 135 aa17.41■□□□□ 0.38
SMARCD2-201ENST00000225742 GPR6P46095 362 aaPredicted RBP17.41■□□□□ 0.38
SMARCD2-201ENST00000225742 LYPD1Q8N2G4 141 aa17.41■□□□□ 0.38
SMARCD2-201ENST00000225742 OR4B1Q8NGF8 309 aa17.41■□□□□ 0.38
SMARCD2-201ENST00000225742 DAZAP1Q96EP5 407 aaKnown RBP17.41■□□□□ 0.38
SMARCD2-201ENST00000225742 A0A1B0GV90 55 aa17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 SNRPCP09234 159 aaKnown RBP17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 HOXB4P17483 251 aaPredicted RBP17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 CDKN1AP38936 164 aa17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 FAM162BQ5T6X4 162 aa17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 GDF5OSQ5U4N7 250 aa17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 LEMD1Q68G75 181 aa17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 CCDC144NLQ6NUI1 221 aa17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 KIR3DL3Q8N743 410 aa17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 ZNF48Q96MX3 618 aaPredicted RBP17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 RCHY1Q96PM5 261 aa17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 H3BRN7 92 aa17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 LHFPL4Q7Z7J7 247 aa17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 Q86TA4 180 aa17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 BPIFA4PQ86YQ2 179 aa17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 VAMP8Q9BV40 100 aa17.4■□□□□ 0.38
SMARCD2-201ENST00000225742 BOD1L1Q8NFC6 3051 aa17.39■□□□□ 0.37
SMARCD2-201ENST00000225742 NPIPB5A8MRT5 1133 aa17.39■□□□□ 0.37
SMARCD2-201ENST00000225742 HBBP68871 147 aa17.39■□□□□ 0.37
SMARCD2-201ENST00000225742 C5orf64Q2M2E5 130 aa17.39■□□□□ 0.37
SMARCD2-201ENST00000225742 OR4F17Q8NGA8 305 aa17.39■□□□□ 0.37
SMARCD2-201ENST00000225742 VN1R17PQ8TDU5 208 aa17.39■□□□□ 0.37
SMARCD2-201ENST00000225742 FAM103A1Q9BTL3 118 aaKnown RBP17.39■□□□□ 0.37
SMARCD2-201ENST00000225742 M0R143 59 aa17.38■□□□□ 0.37
SMARCD2-201ENST00000225742 CD33P20138 364 aa17.38■□□□□ 0.37
SMARCD2-201ENST00000225742 MIEN1Q9BRT3 115 aa17.38■□□□□ 0.37
SMARCD2-201ENST00000225742 ALKBH7Q9BT30 221 aaPredicted RBP17.38■□□□□ 0.37
SMARCD2-201ENST00000225742 HILPDAQ9Y5L2 63 aa17.38■□□□□ 0.37
SMARCD2-201ENST00000225742 ASPMQ8IZT6 3477 aa17.38■□□□□ 0.37
SMARCD2-201ENST00000225742 DIRC3C9JPN6 131 aa17.37■□□□□ 0.37
SMARCD2-201ENST00000225742 NPIPB6E9PJ23 425 aa17.37■□□□□ 0.37
SMARCD2-201ENST00000225742 PMCHP20382 165 aa17.37■□□□□ 0.37
SMARCD2-201ENST00000225742 KRTDAPP60985 99 aa17.37■□□□□ 0.37
SMARCD2-201ENST00000225742 RAXQ9Y2V3 346 aa17.37■□□□□ 0.37
SMARCD2-201ENST00000225742 PTPRQQ9UMZ3 2332 aa17.37■□□□□ 0.37
SMARCD2-201ENST00000225742 TRBV19A0A075B6N1 114 aa17.37■□□□□ 0.37
SMARCD2-201ENST00000225742 WI2-2373I1.2A0A1W2PRP0 233 aa17.37■□□□□ 0.37
SMARCD2-201ENST00000225742 RBPMS2Q6ZRY4 209 aaKnown RBP17.37■□□□□ 0.37
SMARCD2-201ENST00000225742 DTX2Q86UW9 622 aa17.37■□□□□ 0.37
SMARCD2-201ENST00000225742 Q8N976 141 aa17.37■□□□□ 0.37
SMARCD2-201ENST00000225742 SGK494Q96LW2 274 aa17.37■□□□□ 0.37
SMARCD2-201ENST00000225742 CDSNQ15517 529 aa17.36■□□□□ 0.37
SMARCD2-201ENST00000225742 MINOS1Q5TGZ0 78 aa17.36■□□□□ 0.37
SMARCD2-201ENST00000225742 LINC00322Q6ZN03 302 aaPredicted RBP17.36■□□□□ 0.37
SMARCD2-201ENST00000225742 NIT1Q86X76 327 aa17.36■□□□□ 0.37
SMARCD2-201ENST00000225742 ZNF491Q8N8L2 437 aa17.36■□□□□ 0.37
SMARCD2-201ENST00000225742 TMEM75Q8N9X5 138 aa17.36■□□□□ 0.37
SMARCD2-201ENST00000225742 MINOS1-NBL1R4GNA1 71 aa17.36■□□□□ 0.37
SMARCD2-201ENST00000225742 H3BTX0 84 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 K7EQM0 130 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 M0QZK8 103 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 IGLC2P0DOY2 106 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 RAB4AP20338 218 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 ASPHD1Q5U4P2 390 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 C16orf54Q6UWD8 224 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 ZNF562Q6V9R5 426 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 BORCS7Q96B45 105 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 RNF125Q96EQ8 232 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 ZFP30Q9Y2G7 519 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 VWC2LB2RUY7 222 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 LY6HO94772 140 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 IGLV2-11P01706 119 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 MFAP4P55083 255 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 TCF24Q7RTU0 167 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 TTC9CQ8N5M4 171 aa17.35■□□□□ 0.37
SMARCD2-201ENST00000225742 IGLV11-55A0A075B6I3 123 aa17.34■□□□□ 0.37
SMARCD2-201ENST00000225742 CAMPP49913 170 aa17.34■□□□□ 0.37
SMARCD2-201ENST00000225742 KLRD1Q13241 179 aa17.34■□□□□ 0.37
SMARCD2-201ENST00000225742 EBI3Q14213 229 aa17.34■□□□□ 0.37
SMARCD2-201ENST00000225742 HES1Q14469 280 aa17.34■□□□□ 0.37
SMARCD2-201ENST00000225742 EREGO14944 169 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms