RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 TCF23Q7RTU1 214 aa15.04■□□□□ -0
CLIP2-201ENST00000223398 VGLL1Q99990 258 aa15.04■□□□□ -0
CLIP2-201ENST00000223398 FAM215AQ9Y5M1 114 aa15.04■□□□□ -0
CLIP2-201ENST00000223398 CA1P00915 261 aaPredicted RBP15.04■□□□□ -0
CLIP2-201ENST00000223398 SPSB3Q6PJ21 355 aa15.04■□□□□ -0
CLIP2-201ENST00000223398 TRGV1A0A0A0MS02 117 aa15.04■□□□□ -0
CLIP2-201ENST00000223398 JOSD1Q15040 202 aaPredicted RBP15.04■□□□□ -0
CLIP2-201ENST00000223398 FOXL2NBQ6ZUU3 175 aa15.04■□□□□ -0
CLIP2-201ENST00000223398 GGTLC1Q9BX51 225 aa15.04■□□□□ -0
CLIP2-201ENST00000223398 RCHY1Q96PM5 261 aa15.03■□□□□ -0
CLIP2-201ENST00000223398 DOCK9Q9BZ29 2069 aa15.03■□□□□ -0
CLIP2-201ENST00000223398 SRRM4A7MD48 611 aaKnown RBP15.03■□□□□ -0
CLIP2-201ENST00000223398 GZMBP10144 247 aa15.03■□□□□ -0
CLIP2-201ENST00000223398 A0A1W2PRE2 83 aa15.03■□□□□ -0
CLIP2-201ENST00000223398 LDLRAD4O15165 306 aa15.03■□□□□ -0
CLIP2-201ENST00000223398 HOXA5P20719 270 aa15.03■□□□□ -0
CLIP2-201ENST00000223398 RHPN1-AS1Q9BWJ2 59 aa15.03■□□□□ -0
CLIP2-201ENST00000223398 ATP5LO75964 103 aa15.02■□□□□ -0
CLIP2-201ENST00000223398 CACNG7P62955 275 aa15.02■□□□□ -0
CLIP2-201ENST00000223398 PEF1Q9UBV8 284 aaKnown RBP15.02■□□□□ -0
CLIP2-201ENST00000223398 TP53BP1Q12888 1972 aaPredicted RBP15.02■□□□□ -0
CLIP2-201ENST00000223398 GRNP28799 593 aaKnown RBP15.02■□□□□ -0
CLIP2-201ENST00000223398 MLANAQ16655 118 aa15.02■□□□□ -0
CLIP2-201ENST00000223398 LHFPL1Q86WI0 220 aa15.02■□□□□ -0
CLIP2-201ENST00000223398 VCX2Q9H322 139 aa15.02■□□□□ -0
CLIP2-201ENST00000223398 MRPS16Q9Y3D3 137 aaKnown RBP15.02■□□□□ -0
CLIP2-201ENST00000223398 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.02□□□□□ -0.01
CLIP2-201ENST00000223398 FABP2P12104 132 aa15.02□□□□□ -0.01
CLIP2-201ENST00000223398 IGHV1-69DA0A0B4J2H0 117 aa15.02□□□□□ -0.01
CLIP2-201ENST00000223398 ZNF503-AS2A6NEH8 195 aa15.02□□□□□ -0.01
CLIP2-201ENST00000223398 IGHV1-69P01742 117 aa15.02□□□□□ -0.01
CLIP2-201ENST00000223398 SUPT4H1P63272 117 aaKnown RBP15.02□□□□□ -0.01
CLIP2-201ENST00000223398 Q6ZR03 302 aa15.02□□□□□ -0.01
CLIP2-201ENST00000223398 USMG5Q96IX5 58 aa15.02□□□□□ -0.01
CLIP2-201ENST00000223398 MPZP25189 248 aa15.01□□□□□ -0.01
CLIP2-201ENST00000223398 CNTFRP26992 372 aa15.01□□□□□ -0.01
CLIP2-201ENST00000223398 Q8TAT8 98 aa15.01□□□□□ -0.01
CLIP2-201ENST00000223398 FAM110DQ8TAY7 271 aaPredicted RBP15.01□□□□□ -0.01
CLIP2-201ENST00000223398 IFI27P40305 119 aaPredicted RBP15.01□□□□□ -0.01
CLIP2-201ENST00000223398 UBE2E1P51965 193 aa15.01□□□□□ -0.01
CLIP2-201ENST00000223398 ZNF98A6NK75 572 aa15.01□□□□□ -0.01
CLIP2-201ENST00000223398 CMC4P56277 68 aaPredicted RBP15.01□□□□□ -0.01
CLIP2-201ENST00000223398 ST6GALNAC6Q969X2 333 aa15.01□□□□□ -0.01
CLIP2-201ENST00000223398 UQCR10Q9UDW1 63 aa15.01□□□□□ -0.01
CLIP2-201ENST00000223398 MGST2Q99735 147 aa15.01□□□□□ -0.01
CLIP2-201ENST00000223398 DNAL4O96015 105 aa15.01□□□□□ -0.01
CLIP2-201ENST00000223398 OCC1Q8TAD7 63 aa15.01□□□□□ -0.01
CLIP2-201ENST00000223398 RNF166Q96A37 237 aaPredicted RBP15.01□□□□□ -0.01
CLIP2-201ENST00000223398 DPH3P1Q9H4G8 78 aa15.01□□□□□ -0.01
CLIP2-201ENST00000223398 SEPSECSQ9HD40 501 aaKnown RBP15.01□□□□□ -0.01
CLIP2-201ENST00000223398 A0A1B0GW15 77 aa15□□□□□ -0.01
CLIP2-201ENST00000223398 ATP6V0E1O15342 81 aa15□□□□□ -0.01
CLIP2-201ENST00000223398 KIAA1671Q9BY89 1806 aa15□□□□□ -0.01
CLIP2-201ENST00000223398 GATA3P23771 443 aa15□□□□□ -0.01
CLIP2-201ENST00000223398 C1orf122Q6ZSJ8 110 aa15□□□□□ -0.01
CLIP2-201ENST00000223398 SRSF3P84103 164 aaKnown RBP15□□□□□ -0.01
CLIP2-201ENST00000223398 COL5A1-AS1Q5SY13 56 aa15□□□□□ -0.01
CLIP2-201ENST00000223398 GAGE10A6NGK3 116 aa14.99□□□□□ -0.01
CLIP2-201ENST00000223398 FHL1Q13642 323 aa14.99□□□□□ -0.01
CLIP2-201ENST00000223398 ERASQ7Z444 233 aa14.99□□□□□ -0.01
CLIP2-201ENST00000223398 PMCHL2Q9BQD1 86 aa14.99□□□□□ -0.01
CLIP2-201ENST00000223398 A0A087WX48 190 aa14.99□□□□□ -0.01
CLIP2-201ENST00000223398 LBHQ53QV2 105 aaPredicted RBP14.99□□□□□ -0.01
CLIP2-201ENST00000223398 RFNGQ9Y644 331 aa14.99□□□□□ -0.01
CLIP2-201ENST00000223398 WDR81Q562E7 1941 aa14.99□□□□□ -0.01
CLIP2-201ENST00000223398 FAM223BA6NKX1 122 aa14.99□□□□□ -0.01
CLIP2-201ENST00000223398 FAM223AQ8IWN6 122 aa14.99□□□□□ -0.01
CLIP2-201ENST00000223398 C11orf68Q9H3H3 251 aaKnown RBP14.99□□□□□ -0.01
CLIP2-201ENST00000223398 ASCL4Q6XD76 172 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 ZNF524Q96C55 264 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 IGHV2-70DA0A0C4DH43 119 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 G3V318 75 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 NDUFS7O75251 213 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 SCGB1A1P11684 91 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 COTL1Q14019 142 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 DTX2Q86UW9 622 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 FANCMQ8IYD8 2048 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 TRGV9Q99603 122 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 C1QL4Q86Z23 238 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 PRADC1Q9BSG0 188 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 DEFB130BP0DP73 79 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 DEFB130AP0DP74 79 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 CD28P10747 220 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 PET117Q6UWS5 81 aa14.98□□□□□ -0.01
CLIP2-201ENST00000223398 PLXNA4Q9HCM2 1894 aa14.97□□□□□ -0.01
CLIP2-201ENST00000223398 QRFPP83859 136 aa14.97□□□□□ -0.01
CLIP2-201ENST00000223398 YLPM1P49750 1951 aaKnown RBP14.97□□□□□ -0.01
CLIP2-201ENST00000223398 A0A0U1RRA0 63 aa14.97□□□□□ -0.01
CLIP2-201ENST00000223398 ADARB2-AS1A8MUL3 147 aa14.97□□□□□ -0.01
CLIP2-201ENST00000223398 TCF21O43680 179 aa14.97□□□□□ -0.01
CLIP2-201ENST00000223398 CDX1P47902 265 aaPredicted RBP14.97□□□□□ -0.01
CLIP2-201ENST00000223398 NMSQ5H8A3 153 aa14.97□□□□□ -0.01
CLIP2-201ENST00000223398 GATA4P43694 442 aa14.97□□□□□ -0.01
CLIP2-201ENST00000223398 SRSF4Q08170 494 aaKnown RBP14.97□□□□□ -0.01
CLIP2-201ENST00000223398 TRBV6-6A0A0A6YYG2 114 aa14.96□□□□□ -0.01
CLIP2-201ENST00000223398 DEFB131AP59861 70 aa14.96□□□□□ -0.01
CLIP2-201ENST00000223398 NTF4P34130 210 aa14.96□□□□□ -0.01
CLIP2-201ENST00000223398 C14orf144Q96I85 54 aa14.96□□□□□ -0.01
CLIP2-201ENST00000223398 REG4Q9BYZ8 158 aa14.96□□□□□ -0.01
CLIP2-201ENST00000223398 CFHR2P36980 270 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms