RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 COMPP49747 757 aaPredicted RBP11.66□□□□□ -0.54
CNOT3-201ENST00000221232 KLRD1Q13241 179 aa11.66□□□□□ -0.54
CNOT3-201ENST00000221232 TEX45Q8NA69 505 aa11.66□□□□□ -0.54
CNOT3-201ENST00000221232 WNT10AQ9GZT5 417 aa11.66□□□□□ -0.54
CNOT3-201ENST00000221232 ZNF137PP52743 207 aa11.66□□□□□ -0.54
CNOT3-201ENST00000221232 INS-IGF2F8WCM5 200 aa11.65□□□□□ -0.54
CNOT3-201ENST00000221232 CCL21O00585 134 aa11.65□□□□□ -0.54
CNOT3-201ENST00000221232 TIMM23O14925 209 aa11.65□□□□□ -0.54
CNOT3-201ENST00000221232 MMDQ15546 238 aa11.65□□□□□ -0.54
CNOT3-201ENST00000221232 ZNF672Q499Z4 452 aaPredicted RBP11.65□□□□□ -0.54
CNOT3-201ENST00000221232 ETFRF1Q6IPR1 90 aa11.65□□□□□ -0.54
CNOT3-201ENST00000221232 SRSF12Q8WXF0 261 aaKnown RBP11.65□□□□□ -0.54
CNOT3-201ENST00000221232 CACNA1BQ00975 2339 aa11.65□□□□□ -0.54
CNOT3-201ENST00000221232 TRBV9A0A0B4J1U6 114 aa11.65□□□□□ -0.54
CNOT3-201ENST00000221232 DIRC3C9JPN6 131 aa11.65□□□□□ -0.54
CNOT3-201ENST00000221232 FAM71F2Q6NXP2 309 aa11.65□□□□□ -0.54
CNOT3-201ENST00000221232 C17orf77Q96MU5 243 aa11.65□□□□□ -0.54
CNOT3-201ENST00000221232 VAMP8Q9BV40 100 aa11.65□□□□□ -0.54
CNOT3-201ENST00000221232 Q9H3A6 140 aa11.65□□□□□ -0.54
CNOT3-201ENST00000221232 TEX22C9J3V5 150 aa11.65□□□□□ -0.55
CNOT3-201ENST00000221232 M0QZ24 198 aa11.65□□□□□ -0.55
CNOT3-201ENST00000221232 NBL1P41271 181 aa11.65□□□□□ -0.55
CNOT3-201ENST00000221232 HES1Q14469 280 aa11.65□□□□□ -0.55
CNOT3-201ENST00000221232 FBLN7Q53RD9 439 aa11.65□□□□□ -0.55
CNOT3-201ENST00000221232 LCN12Q6JVE5 192 aa11.65□□□□□ -0.55
CNOT3-201ENST00000221232 BEND2Q8NDZ0 799 aa11.65□□□□□ -0.55
CNOT3-201ENST00000221232 PGLYRP4Q96LB8 373 aa11.65□□□□□ -0.55
CNOT3-201ENST00000221232 ZNF586Q9NXT0 402 aa11.65□□□□□ -0.55
CNOT3-201ENST00000221232 K7ENP7 123 aa11.64□□□□□ -0.55
CNOT3-201ENST00000221232 HLA-DQA1P01909 254 aa11.64□□□□□ -0.55
CNOT3-201ENST00000221232 MT-ND6P03923 174 aa11.64□□□□□ -0.55
CNOT3-201ENST00000221232 FOXA3P55318 350 aaPredicted RBP11.64□□□□□ -0.55
CNOT3-201ENST00000221232 GRAMD2BQ96HH9 432 aa11.64□□□□□ -0.55
CNOT3-201ENST00000221232 VKORC1Q9BQB6 163 aa11.64□□□□□ -0.55
CNOT3-201ENST00000221232 C2orf88Q9BSF0 95 aa11.64□□□□□ -0.55
CNOT3-201ENST00000221232 CRYGCP07315 174 aa11.64□□□□□ -0.55
CNOT3-201ENST00000221232 CRYGBP07316 175 aa11.64□□□□□ -0.55
CNOT3-201ENST00000221232 TMEM11P17152 192 aa11.64□□□□□ -0.55
CNOT3-201ENST00000221232 CIARTQ8N365 385 aaPredicted RBP11.64□□□□□ -0.55
CNOT3-201ENST00000221232 C8orf31Q8N9H6 132 aa11.64□□□□□ -0.55
CNOT3-201ENST00000221232 TSKUQ8WUA8 353 aa11.64□□□□□ -0.55
CNOT3-201ENST00000221232 F11RQ9Y624 299 aaKnown RBP11.64□□□□□ -0.55
CNOT3-201ENST00000221232 PMCHL1Q16048 86 aa11.63□□□□□ -0.55
CNOT3-201ENST00000221232 PRNTQ86SH4 94 aa11.63□□□□□ -0.55
CNOT3-201ENST00000221232 TMEM116Q8NCL8 245 aa11.63□□□□□ -0.55
CNOT3-201ENST00000221232 TRGV9Q99603 122 aa11.63□□□□□ -0.55
CNOT3-201ENST00000221232 PPP1R14DQ9NXH3 145 aa11.63□□□□□ -0.55
CNOT3-201ENST00000221232 CBY1Q9Y3M2 126 aa11.63□□□□□ -0.55
CNOT3-201ENST00000221232 TMEM183BQ1AE95 376 aa11.63□□□□□ -0.55
CNOT3-201ENST00000221232 RNASEKQ6P5S7 137 aaKnown RBP11.63□□□□□ -0.55
CNOT3-201ENST00000221232 BCL6BQ8N143 479 aaPredicted RBP11.63□□□□□ -0.55
CNOT3-201ENST00000221232 KCNS1Q96KK3 526 aa11.63□□□□□ -0.55
CNOT3-201ENST00000221232 HIGD1AQ9Y241 93 aa11.63□□□□□ -0.55
CNOT3-201ENST00000221232 KIR2DL5BA0A0G2JN68 375 aa11.62□□□□□ -0.55
CNOT3-201ENST00000221232 KIR2DL5BA0A0G2JPC4 375 aa11.62□□□□□ -0.55
CNOT3-201ENST00000221232 M0R143 59 aa11.62□□□□□ -0.55
CNOT3-201ENST00000221232 IGHV3-23P01764 117 aa11.62□□□□□ -0.55
CNOT3-201ENST00000221232 NPSP0C0P6 89 aa11.62□□□□□ -0.55
CNOT3-201ENST00000221232 ESDP10768 282 aa11.62□□□□□ -0.55
CNOT3-201ENST00000221232 MYCNOSP40205 109 aa11.62□□□□□ -0.55
CNOT3-201ENST00000221232 GOLT1AQ6ZVE7 132 aa11.62□□□□□ -0.55
CNOT3-201ENST00000221232 KIR2DL5AQ8N109 375 aa11.62□□□□□ -0.55
CNOT3-201ENST00000221232 C8orf46Q8TAG6 207 aa11.62□□□□□ -0.55
CNOT3-201ENST00000221232 C18orf32Q8TCD1 76 aa11.62□□□□□ -0.55
CNOT3-201ENST00000221232 MBD6Q96DN6 1003 aa11.62□□□□□ -0.55
CNOT3-201ENST00000221232 RASL11BQ9BPW5 248 aa11.62□□□□□ -0.55
CNOT3-201ENST00000221232 COL12A1Q99715 3063 aa11.62□□□□□ -0.55
CNOT3-201ENST00000221232 ZNF324O75467 553 aaPredicted RBP11.62□□□□□ -0.55
CNOT3-201ENST00000221232 HIST1H1EP10412 219 aaKnown RBP11.62□□□□□ -0.55
CNOT3-201ENST00000221232 GPR82Q96P67 336 aa11.62□□□□□ -0.55
CNOT3-201ENST00000221232 TIMM8BQ9Y5J9 83 aaPredicted RBP11.62□□□□□ -0.55
CNOT3-201ENST00000221232 SH2D7A6NKC9 451 aaPredicted RBP11.61□□□□□ -0.55
CNOT3-201ENST00000221232 C3orf79P0CE67 100 aa11.61□□□□□ -0.55
CNOT3-201ENST00000221232 GP9P14770 177 aa11.61□□□□□ -0.55
CNOT3-201ENST00000221232 OR10J3Q5JRS4 329 aa11.61□□□□□ -0.55
CNOT3-201ENST00000221232 TEX43Q6ZNM6 134 aa11.61□□□□□ -0.55
CNOT3-201ENST00000221232 SLC25A39Q9BZJ4 359 aaPredicted RBP11.61□□□□□ -0.55
CNOT3-201ENST00000221232 TCRAP04437 139 aa11.61□□□□□ -0.55
CNOT3-201ENST00000221232 IGLC1P0CG04 106 aa11.61□□□□□ -0.55
CNOT3-201ENST00000221232 CLEC2AQ6UVW9 174 aa11.61□□□□□ -0.55
CNOT3-201ENST00000221232 OR8B3Q8NGG8 313 aa11.61□□□□□ -0.55
CNOT3-201ENST00000221232 DAZAP1Q96EP5 407 aaKnown RBP11.61□□□□□ -0.55
CNOT3-201ENST00000221232 OR8B2Q96RD0 313 aa11.61□□□□□ -0.55
CNOT3-201ENST00000221232 P01737 135 aa11.61□□□□□ -0.55
CNOT3-201ENST00000221232 NIT1Q86X76 327 aa11.61□□□□□ -0.55
CNOT3-201ENST00000221232 STXBP6Q8NFX7 210 aa11.61□□□□□ -0.55
CNOT3-201ENST00000221232 SPTAN1Q13813 2472 aaKnown RBP11.61□□□□□ -0.55
CNOT3-201ENST00000221232 IGHV3OR16-8A0A075B7F1 116 aa11.6□□□□□ -0.55
CNOT3-201ENST00000221232 HSBP1O75506 76 aa11.6□□□□□ -0.55
CNOT3-201ENST00000221232 S100A7P31151 101 aa11.6□□□□□ -0.55
CNOT3-201ENST00000221232 Q8N976 141 aa11.6□□□□□ -0.55
CNOT3-201ENST00000221232 GTSF1Q8WW33 167 aa11.6□□□□□ -0.55
CNOT3-201ENST00000221232 BORCS7Q96B45 105 aa11.6□□□□□ -0.55
CNOT3-201ENST00000221232 C7orf69Q9H7B7 122 aa11.6□□□□□ -0.55
CNOT3-201ENST00000221232 NUTF2P61970 127 aaKnown RBP11.6□□□□□ -0.55
CNOT3-201ENST00000221232 RAXQ9Y2V3 346 aa11.6□□□□□ -0.55
CNOT3-201ENST00000221232 IGHV3-35A0A0C4DH35 117 aa11.59□□□□□ -0.55
CNOT3-201ENST00000221232 NCBP2LA6PVI3 153 aaKnown RBP11.59□□□□□ -0.55
CNOT3-201ENST00000221232 I3L2K1 104 aa11.59□□□□□ -0.55
CNOT3-201ENST00000221232 IGKV1-17P01599 117 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms