RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 MESP2Q0VG99 397 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 TGIF1Q15583 401 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 C9orf139Q6ZV77 190 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 MESP1Q9BRJ9 268 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 TMEM14CQ9P0S9 112 aa3.65□□□□□ -1.83
CHD9-201ENST00000219084 PRR32B1ATL7 298 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 H3BUT2 72 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 NTN3O00634 580 aaPredicted RBP3.64□□□□□ -1.83
CHD9-201ENST00000219084 MNX1P50219 401 aaPredicted RBP3.64□□□□□ -1.83
CHD9-201ENST00000219084 NUP35Q8NFH5 326 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 NPFFR1Q9GZQ6 430 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 RFPL3SP0C7P2 107 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 TAL2Q16559 108 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 FAM19A2Q8N3H0 131 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 C8orf31Q8N9H6 132 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 OR11H6Q8NGC7 330 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 WIPF2Q8TF74 440 aaPredicted RBP3.64□□□□□ -1.83
CHD9-201ENST00000219084 JMJD8Q96S16 334 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 TNCP24821 2201 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 FOXA3P55318 350 aaPredicted RBP3.64□□□□□ -1.83
CHD9-201ENST00000219084 TRAV8-2A0A0B4J237 113 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 M0R2P5 195 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 NDUFA3O95167 84 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 TIAF1O95411 115 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 KIR3DL3Q8N743 410 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 SEPSECSQ9HD40 501 aaKnown RBP3.64□□□□□ -1.83
CHD9-201ENST00000219084 ZNF71Q9NQZ8 489 aaPredicted RBP3.64□□□□□ -1.83
CHD9-201ENST00000219084 ABCA1O95477 2261 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 SMIM27A0A1W2PRY6 76 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 VCYO14598 125 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 IGHV2-70P01814 119 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 LMO1P25800 156 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 RNASE4P34096 147 aaKnown RBP3.64□□□□□ -1.83
CHD9-201ENST00000219084 Q6P435 159 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 RPP25LQ8N5L8 163 aaKnown RBP3.64□□□□□ -1.83
CHD9-201ENST00000219084 DNAJC30Q96LL9 226 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 SIGLEC12Q96PQ1 595 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 DPH3P1Q9H4G8 78 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 TNRC6BQ9UPQ9 1833 aaKnown RBP3.64□□□□□ -1.83
CHD9-201ENST00000219084 TCRAP04437 139 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 PAX2Q02962 417 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 FAM74A4Q5TZK3 123 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 E9PLN8 166 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 M0R381 172 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 INAFM2P0DMQ5 153 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 HTN1P15515 57 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 LDLRAD2Q5SZI1 272 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 SFTA2Q6UW10 78 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 OR10W1Q8NGF6 305 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 Q8TCH9 128 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 DUX3Q96PT4 197 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 VKORC1Q9BQB6 163 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 DCTN5Q9BTE1 182 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 ERG28Q9UKR5 140 aa3.64□□□□□ -1.83
CHD9-201ENST00000219084 ZNF815PA8K554 130 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 ATXN7O15265 892 aaPredicted RBP3.63□□□□□ -1.83
CHD9-201ENST00000219084 IL17RELQ6ZVW7 336 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 ZCCHC24Q8N2G6 241 aaKnown RBP3.63□□□□□ -1.83
CHD9-201ENST00000219084 FAM168AQ92567 244 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 SPXQ9BT56 116 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 HAX1O00165 279 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 ZNF138P52744 262 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 C20orf204Q6ZNR8 217 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 ZNF329Q86UD4 541 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 GPHA2Q96T91 129 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 IGHV1-24A0A0C4DH33 117 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 A0A0G2JMM0 328 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 A0A1W2PPB8 328 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 KIR3DP1A8MWS1 328 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 C9orf172C9J069 976 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 H0YJW9 148 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 J3KRW8 73 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 IGHV2-5P01817 119 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 MST1P26927 711 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 TDGF1P3P51864 188 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 ATP5J2P56134 94 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 C18orf15Q96N68 181 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 NHP2Q9NX24 153 aaKnown RBP3.63□□□□□ -1.83
CHD9-201ENST00000219084 SLC25A15Q9Y619 301 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 EP300Q09472 2414 aaPredicted RBP3.63□□□□□ -1.83
CHD9-201ENST00000219084 IGKV1-27A0A075B6S5 117 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 TRBV7-9A0A0J9YWB2 115 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 GGTLC3B5MD39 225 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 ZNF688P0C7X2 276 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 SLC25A16P16260 332 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 PAX8Q06710 450 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 GAGE2BQ13066 116 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 GAGE2EQ4V326 116 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 GCSAMLQ5JQS6 135 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 PEAR1Q5VY43 1037 aaPredicted RBP3.63□□□□□ -1.83
CHD9-201ENST00000219084 ZNF474Q6S9Z5 364 aaPredicted RBP3.63□□□□□ -1.83
CHD9-201ENST00000219084 GAGE2DQ9UEU5 116 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 RFNGQ9Y644 331 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 IGHV3-72A0A0B4J1Y9 119 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 PRSS46E5RG02 174 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 IGKV1-5P01602 117 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 FBXL15Q9H469 300 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 PLXNB1O43157 2135 aa3.63□□□□□ -1.83
CHD9-201ENST00000219084 LOC102724200A0A096LPH7 203 aaPredicted RBP3.63□□□□□ -1.83
CHD9-201ENST00000219084 TMEM8BA6NDV4 472 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms