RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 OR2T8A6NH00 312 aa13.46□□□□□ -0.25
RABGGTA-201ENST00000216840 PEX7O00628 323 aa13.46□□□□□ -0.25
RABGGTA-201ENST00000216840 CTSGP08311 255 aa13.46□□□□□ -0.25
RABGGTA-201ENST00000216840 LINC00479Q96M42 142 aa13.46□□□□□ -0.25
RABGGTA-201ENST00000216840 TCEAL7Q9BRU2 100 aa13.46□□□□□ -0.25
RABGGTA-201ENST00000216840 BEX4Q9NWD9 120 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-201ENST00000216840 MAP1AP78559 2803 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-201ENST00000216840 USP9YO00507 2555 aaPredicted RBP13.46□□□□□ -0.26
RABGGTA-201ENST00000216840 A6NDX4 124 aa13.46□□□□□ -0.26
RABGGTA-201ENST00000216840 H3BTX0 84 aa13.46□□□□□ -0.26
RABGGTA-201ENST00000216840 H3BUX3 64 aa13.46□□□□□ -0.26
RABGGTA-201ENST00000216840 GGCTO75223 188 aaKnown RBP13.46□□□□□ -0.26
RABGGTA-201ENST00000216840 IGLV2-8P01709 118 aa13.46□□□□□ -0.26
RABGGTA-201ENST00000216840 TAS2R60P59551 318 aa13.46□□□□□ -0.26
RABGGTA-201ENST00000216840 RHOGP84095 191 aa13.46□□□□□ -0.26
RABGGTA-201ENST00000216840 USF2Q15853 346 aaPredicted RBP13.46□□□□□ -0.26
RABGGTA-201ENST00000216840 LY6EQ16553 131 aa13.46□□□□□ -0.26
RABGGTA-201ENST00000216840 C15orf32Q32M92 178 aa13.46□□□□□ -0.26
RABGGTA-201ENST00000216840 SMUG1Q53HV7 270 aa13.46□□□□□ -0.26
RABGGTA-201ENST00000216840 IMMP2LQ96T52 175 aa13.46□□□□□ -0.26
RABGGTA-201ENST00000216840 CDC42EP3Q9UKI2 254 aa13.46□□□□□ -0.26
RABGGTA-201ENST00000216840 PTPN13Q12923 2485 aa13.46□□□□□ -0.26
RABGGTA-201ENST00000216840 PGPA6NDG6 321 aa13.45□□□□□ -0.26
RABGGTA-201ENST00000216840 TGOLN2O43493 480 aa13.45□□□□□ -0.26
RABGGTA-201ENST00000216840 TRGC2P03986 189 aa13.45□□□□□ -0.26
RABGGTA-201ENST00000216840 HIST1H1EP10412 219 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-201ENST00000216840 CNN1P51911 297 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-201ENST00000216840 SNRPEP62304 92 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-201ENST00000216840 GNG5P63218 68 aa13.45□□□□□ -0.26
RABGGTA-201ENST00000216840 OR5I1Q13606 314 aa13.45□□□□□ -0.26
RABGGTA-201ENST00000216840 BCL6BQ8N143 479 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-201ENST00000216840 ZNF502Q8TBZ5 544 aa13.45□□□□□ -0.26
RABGGTA-201ENST00000216840 CHRDL1Q9BU40 450 aa13.45□□□□□ -0.26
RABGGTA-201ENST00000216840 ZNF586Q9NXT0 402 aa13.45□□□□□ -0.26
RABGGTA-201ENST00000216840 EPDR1Q9UM22 224 aa13.45□□□□□ -0.26
RABGGTA-201ENST00000216840 A0A1W2PPQ1 181 aa13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 C5orf52A6NGY3 159 aa13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 SLC25A5P05141 298 aaKnown RBP13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 ADMP35318 185 aa13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 LOXL1Q08397 574 aaPredicted RBP13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 DEFB113Q30KQ7 82 aa13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 C19orf54Q5BKX5 351 aa13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 KCNIP4Q6PIL6 250 aa13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 MAPK1IP1LQ8NDC0 245 aa13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 Q9H3A6 140 aa13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 CENPEQ02224 2701 aa13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 S100A6P06703 90 aa13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 CRIP2P52943 208 aaPredicted RBP13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 FAM3BP58499 235 aaPredicted RBP13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 SRD5A3Q9H8P0 318 aa13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 ZFHX3Q15911 3703 aa13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 CR1P17927 2039 aa13.44□□□□□ -0.26
RABGGTA-201ENST00000216840 RNF223E7ERA6 249 aa13.43□□□□□ -0.26
RABGGTA-201ENST00000216840 SCGB2A1O75556 95 aa13.43□□□□□ -0.26
RABGGTA-201ENST00000216840 GCGP01275 180 aa13.43□□□□□ -0.26
RABGGTA-201ENST00000216840 FOXL1Q12952 345 aa13.43□□□□□ -0.26
RABGGTA-201ENST00000216840 BPIFA4PQ86YQ2 179 aa13.43□□□□□ -0.26
RABGGTA-201ENST00000216840 KMT2BQ9UMN6 2715 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-201ENST00000216840 TRAV41A0A0B4J266 112 aa13.43□□□□□ -0.26
RABGGTA-201ENST00000216840 TRAV34A0A0B4J273 112 aa13.43□□□□□ -0.26
RABGGTA-201ENST00000216840 ZNF98A6NK75 572 aa13.43□□□□□ -0.26
RABGGTA-201ENST00000216840 J3QLI3 93 aa13.43□□□□□ -0.26
RABGGTA-201ENST00000216840 MRPS12O15235 138 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-201ENST00000216840 LRRC75A-AS1Q8N1F1 130 aa13.43□□□□□ -0.26
RABGGTA-201ENST00000216840 ZNF414Q96IQ9 312 aa13.43□□□□□ -0.26
RABGGTA-201ENST00000216840 CELSR1Q9NYQ6 3014 aa13.43□□□□□ -0.26
RABGGTA-201ENST00000216840 CSMD2Q7Z408 3487 aa13.42□□□□□ -0.26
RABGGTA-201ENST00000216840 PHOX2AO14813 284 aa13.42□□□□□ -0.26
RABGGTA-201ENST00000216840 TGFAP01135 160 aa13.42□□□□□ -0.26
RABGGTA-201ENST00000216840 IGLC2P0DOY2 106 aa13.42□□□□□ -0.26
RABGGTA-201ENST00000216840 ERVFC1-1P60608 527 aa13.42□□□□□ -0.26
RABGGTA-201ENST00000216840 C9orf152Q5JTZ5 239 aa13.42□□□□□ -0.26
RABGGTA-201ENST00000216840 C5orf17Q8NAS9 161 aa13.42□□□□□ -0.26
RABGGTA-201ENST00000216840 MS4A10Q96PG2 267 aa13.42□□□□□ -0.26
RABGGTA-201ENST00000216840 PPP5D1E7EU14 171 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 SLC17A3O00476 420 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 ISLRO14498 428 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 TYMSP04818 313 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 GPR183P32249 361 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 TMEM183BQ1AE95 376 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 S100A7AQ86SG5 101 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 OTORQ9NRC9 128 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 LINC00527Q9UJ94 153 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 V9GYV3 84 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 HIST1H2BKO60814 126 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 HIST1H2BJP06899 126 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 HIST1H2BOP23527 126 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 HIST1H2BBP33778 126 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 HIST1H2BDP58876 126 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 HIST1H2BCP62807 126 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 HIST2H2BEQ16778 126 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 Q5PR19 223 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 NHLRC2Q8NBF2 726 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 OR4F17Q8NGA8 305 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 FRZBQ92765 325 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 HIST1H2BHQ93079 126 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 CCDC140Q96MF4 163 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 HIST1H2BNQ99877 126 aa13.41□□□□□ -0.26
RABGGTA-201ENST00000216840 HIST1H2BMQ99879 126 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms