RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 INSIG2Q9Y5U4 225 aa10.61□□□□□ -0.71
SRP54-201ENST00000216774 E7EQL1 145 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 CNTFRP26992 372 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 TSPOP30536 169 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 Q86TA4 180 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 PRSS33Q8NF86 280 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 C1RLQ9NZP8 487 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 RP1L1Q8IWN7 2480 aaPredicted RBP10.6□□□□□ -0.71
SRP54-201ENST00000216774 TRBV6-1A0A0K0K1D8 114 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 BUB1B-PAK6H3BSN5 160 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 CRXO43186 299 aaPredicted RBP10.6□□□□□ -0.71
SRP54-201ENST00000216774 RBP4P02753 201 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 IGLC1P0CG04 106 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 RBPJQ06330 500 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 Q56UQ5 140 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 DMRTA1Q5VZB9 504 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 LEMD1Q68G75 181 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 CYB5R2Q6BCY4 276 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 LHFPL4Q7Z7J7 247 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 ATOH7Q8N100 152 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 URB1-AS1Q96HZ7 61 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 TMEM70Q9BUB7 260 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 ZNF835Q9Y2P0 537 aa10.6□□□□□ -0.71
SRP54-201ENST00000216774 APELAP0DMC3 54 aa10.59□□□□□ -0.71
SRP54-201ENST00000216774 PSG1P11464 419 aa10.59□□□□□ -0.71
SRP54-201ENST00000216774 HOXB4P17483 251 aaPredicted RBP10.59□□□□□ -0.71
SRP54-201ENST00000216774 GFRALQ6UXV0 394 aa10.59□□□□□ -0.71
SRP54-201ENST00000216774 PGLYRP4Q96LB8 373 aa10.59□□□□□ -0.71
SRP54-201ENST00000216774 RNF5Q99942 180 aa10.59□□□□□ -0.71
SRP54-201ENST00000216774 SRSF8Q9BRL6 282 aaKnown RBP10.59□□□□□ -0.71
SRP54-201ENST00000216774 SLC25A39Q9BZJ4 359 aaPredicted RBP10.59□□□□□ -0.71
SRP54-201ENST00000216774 IGHV3-21A0A0B4J1V1 117 aa10.59□□□□□ -0.71
SRP54-201ENST00000216774 TFPI2P48307 235 aa10.59□□□□□ -0.71
SRP54-201ENST00000216774 LYZP61626 148 aa10.59□□□□□ -0.71
SRP54-201ENST00000216774 MAJINQ3KP22 176 aa10.59□□□□□ -0.71
SRP54-201ENST00000216774 FAM120AOSQ5T036 256 aa10.59□□□□□ -0.71
SRP54-201ENST00000216774 STPG4Q8N801 248 aa10.59□□□□□ -0.71
SRP54-201ENST00000216774 NDFIP1Q9BT67 221 aa10.59□□□□□ -0.71
SRP54-201ENST00000216774 B9A039 149 aa10.58□□□□□ -0.72
SRP54-201ENST00000216774 I3L2K1 104 aa10.58□□□□□ -0.72
SRP54-201ENST00000216774 APOBEC3AP31941 199 aaPredicted RBP10.58□□□□□ -0.72
SRP54-201ENST00000216774 C16orf54Q6UWD8 224 aa10.58□□□□□ -0.72
SRP54-201ENST00000216774 SRSF12Q8WXF0 261 aaKnown RBP10.58□□□□□ -0.72
SRP54-201ENST00000216774 RNF24Q9Y225 148 aa10.58□□□□□ -0.72
SRP54-201ENST00000216774 LOC102724200A0A096LPH7 203 aaPredicted RBP10.58□□□□□ -0.72
SRP54-201ENST00000216774 H3BTX0 84 aa10.58□□□□□ -0.72
SRP54-201ENST00000216774 HAX1O00165 279 aa10.58□□□□□ -0.72
SRP54-201ENST00000216774 IGLV2-11P01706 119 aa10.58□□□□□ -0.72
SRP54-201ENST00000216774 COL8A1P27658 744 aa10.58□□□□□ -0.72
SRP54-201ENST00000216774 ARFGEF3Q5TH69 2177 aa10.58□□□□□ -0.72
SRP54-201ENST00000216774 ABHD17AQ96GS6 310 aa10.58□□□□□ -0.72
SRP54-201ENST00000216774 RASL11BQ9BPW5 248 aa10.58□□□□□ -0.72
SRP54-201ENST00000216774 GSX1Q9H4S2 264 aaPredicted RBP10.58□□□□□ -0.72
SRP54-201ENST00000216774 PPP1R14DQ9NXH3 145 aa10.58□□□□□ -0.72
SRP54-201ENST00000216774 SH3BGRL2Q9UJC5 107 aa10.58□□□□□ -0.72
SRP54-201ENST00000216774 CNOT1A5YKK6 2376 aaKnown RBP10.57□□□□□ -0.72
SRP54-201ENST00000216774 MGAQ8IWI9 3026 aa10.57□□□□□ -0.72
SRP54-201ENST00000216774 FOXA3P55318 350 aaPredicted RBP10.57□□□□□ -0.72
SRP54-201ENST00000216774 IGHV1-24A0A0C4DH33 117 aa10.56□□□□□ -0.72
SRP54-201ENST00000216774 CHEK1O14757 476 aa10.56□□□□□ -0.72
SRP54-201ENST00000216774 IGLL1P15814 213 aa10.56□□□□□ -0.72
SRP54-201ENST00000216774 Q8NA96 180 aa10.56□□□□□ -0.72
SRP54-201ENST00000216774 RPEQ96AT9 228 aa10.56□□□□□ -0.72
SRP54-201ENST00000216774 FBXL15Q9H469 300 aa10.56□□□□□ -0.72
SRP54-201ENST00000216774 NDUFB8O95169 186 aa10.56□□□□□ -0.72
SRP54-201ENST00000216774 IGKV1-17P01599 117 aa10.56□□□□□ -0.72
SRP54-201ENST00000216774 APOHP02749 345 aaPredicted RBP10.56□□□□□ -0.72
SRP54-201ENST00000216774 OR5AL1P0C617 328 aa10.56□□□□□ -0.72
SRP54-201ENST00000216774 GOLT1AQ6ZVE7 132 aa10.56□□□□□ -0.72
SRP54-201ENST00000216774 KIR3DL3Q8N743 410 aa10.56□□□□□ -0.72
SRP54-201ENST00000216774 ORAOV1Q8WV07 137 aa10.56□□□□□ -0.72
SRP54-201ENST00000216774 SCNM1Q9BWG6 230 aa10.56□□□□□ -0.72
SRP54-201ENST00000216774 CLEC5AQ9NY25 188 aa10.56□□□□□ -0.72
SRP54-201ENST00000216774 SMG1Q96Q15 3661 aaKnown RBP10.55□□□□□ -0.72
SRP54-201ENST00000216774 TRAV8-1A0A0A6YYK1 113 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 LY6LH3BQJ8 138 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 SPATA12Q7Z6I5 190 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 PRNTQ86SH4 94 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 BPIFA4PQ86YQ2 179 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 LYPD1Q8N2G4 141 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 EXOC3-AS1Q8N2X6 119 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 CIARTQ8N365 385 aaPredicted RBP10.55□□□□□ -0.72
SRP54-201ENST00000216774 TMEM75Q8N9X5 138 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 SHANK2-AS3Q9BTD1 123 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 ST20Q9HBF5 79 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 PLXNB1O43157 2135 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 TRBV19A0A075B6N1 114 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 SYS1-DBNDD2H3BUS1 97 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 SIAH2O43255 324 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 LEPROTL1O95214 131 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 LIPFP07098 398 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 DLX1P56177 255 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 OR4F17Q8NGA8 305 aa10.55□□□□□ -0.72
SRP54-201ENST00000216774 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.54□□□□□ -0.72
SRP54-201ENST00000216774 PPIAL4CA0A0B4J2A2 164 aa10.54□□□□□ -0.72
SRP54-201ENST00000216774 OR4C46A6NHA9 309 aa10.54□□□□□ -0.72
SRP54-201ENST00000216774 K7EQM0 130 aa10.54□□□□□ -0.72
SRP54-201ENST00000216774 CD3EP07766 207 aa10.54□□□□□ -0.72
SRP54-201ENST00000216774 PPIAL4GP0DN37 164 aa10.54□□□□□ -0.72
SRP54-201ENST00000216774 PLGLAQ15195 96 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms