RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 RAB4AP20338 218 aa6.63□□□□□ -1.35
CDC27-201ENST00000066544 ATP5IP56385 69 aaPredicted RBP6.63□□□□□ -1.35
CDC27-201ENST00000066544 TMEM30BQ3MIR4 351 aa6.63□□□□□ -1.35
CDC27-201ENST00000066544 RNF2Q99496 336 aa6.63□□□□□ -1.35
CDC27-201ENST00000066544 MCRIP2Q9BUT9 160 aaKnown RBP6.63□□□□□ -1.35
CDC27-201ENST00000066544 SHISA9B4DS77 424 aa6.63□□□□□ -1.35
CDC27-201ENST00000066544 M0R2Z0 102 aa6.63□□□□□ -1.35
CDC27-201ENST00000066544 PSG1P11464 419 aa6.63□□□□□ -1.35
CDC27-201ENST00000066544 MC5RP33032 325 aa6.63□□□□□ -1.35
CDC27-201ENST00000066544 ZNF138P52744 262 aa6.63□□□□□ -1.35
CDC27-201ENST00000066544 ARF6P62330 175 aa6.63□□□□□ -1.35
CDC27-201ENST00000066544 TCF15Q12870 199 aa6.63□□□□□ -1.35
CDC27-201ENST00000066544 GOLT1AQ6ZVE7 132 aa6.63□□□□□ -1.35
CDC27-201ENST00000066544 PRNTQ86SH4 94 aa6.63□□□□□ -1.35
CDC27-201ENST00000066544 NIT1Q86X76 327 aa6.63□□□□□ -1.35
CDC27-201ENST00000066544 DAZAP1Q96EP5 407 aaKnown RBP6.63□□□□□ -1.35
CDC27-201ENST00000066544 CLEC7AQ9BXN2 247 aa6.63□□□□□ -1.35
CDC27-201ENST00000066544 ARL2-SNX15V9GYD0 113 aa6.63□□□□□ -1.35
CDC27-201ENST00000066544 HIVEP3Q5T1R4 2406 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 IGHV3OR16-8A0A075B7F1 116 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 HES1Q14469 280 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 Q9H3A6 140 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 SIGLEC9Q9Y336 463 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 Q6ZN92 141 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 MRGPRG-AS1Q2M3A8 158 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 PPP1R27Q86WC6 154 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 SRSF12Q8WXF0 261 aaKnown RBP6.62□□□□□ -1.35
CDC27-201ENST00000066544 COL12A1Q99715 3063 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 IGHV1-3A0A0C4DH29 117 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 IGHV3-35A0A0C4DH35 117 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 P01737 135 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 CD3EP07766 207 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 HIST1H1EP10412 219 aaKnown RBP6.62□□□□□ -1.35
CDC27-201ENST00000066544 LGALS7P47929 136 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 Q6ZVH6 145 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 C17orf77Q96MU5 243 aa6.62□□□□□ -1.35
CDC27-201ENST00000066544 PPIAL4CA0A0B4J2A2 164 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 PPIAL4GP0DN37 164 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 ESDP10768 282 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 Q8N976 141 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 GRAMD2BQ96HH9 432 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 GPR82Q96P67 336 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 C20orf144Q9BQM9 153 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 DLX6P56179 175 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 OR8B2Q96RD0 313 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 NGBQ9NPG2 151 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 MUC21A0A0G2JKD1 596 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 MUC21A0A140T8X8 626 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 KLRD1Q13241 179 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 ZNF124Q15973 351 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 MUC21Q5SSG8 566 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 TMSB15BA0A087X1C1 80 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 RPLP1P05386 114 aaKnown RBP6.61□□□□□ -1.35
CDC27-201ENST00000066544 COL8A1P27658 744 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 OR10J3Q5JRS4 329 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 MBD6Q96DN6 1003 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 FSTL3O95633 263 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 MUC15Q8N387 334 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 THAP8Q8NA92 274 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 HIGD1AQ9Y241 93 aa6.61□□□□□ -1.35
CDC27-201ENST00000066544 M0R3E3 92 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 TIMM23O14925 209 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 IGHV3-23P01764 117 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 PRRX1P54821 245 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 ETFRF1Q6IPR1 90 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 OR4B1Q8NGF8 309 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 TCRAP04437 139 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 NPSP0C0P6 89 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 HNRNPA3P51991 378 aaKnown RBP6.6□□□□□ -1.35
CDC27-201ENST00000066544 EBLN2Q6P2I7 272 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 LINC00173Q6ZV60 143 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 SSX8Q7RTT4 187 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 OR4A5Q8NH83 315 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 RASL11BQ9BPW5 248 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 PMCHL2Q9BQD1 86 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 HINT1P49773 126 aaPredicted RBP6.6□□□□□ -1.35
CDC27-201ENST00000066544 COX19Q49B96 90 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 LDLRAD2Q5SZI1 272 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 BCL6BQ8N143 479 aaPredicted RBP6.6□□□□□ -1.35
CDC27-201ENST00000066544 LINC00311Q8N616 119 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 C5orf17Q8NAS9 161 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 GTSF1Q8WW33 167 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 TMEM208Q9BTX3 173 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 APOBEC3AP31941 199 aaPredicted RBP6.6□□□□□ -1.35
CDC27-201ENST00000066544 IGF2-ASQ6U949 168 aa6.6□□□□□ -1.35
CDC27-201ENST00000066544 ALKBH7Q9BT30 221 aaPredicted RBP6.6□□□□□ -1.35
CDC27-201ENST00000066544 RPP21Q9H633 154 aaKnown RBP6.6□□□□□ -1.35
CDC27-201ENST00000066544 BUB1B-PAK6H3BSN5 160 aa6.59□□□□□ -1.35
CDC27-201ENST00000066544 ASCL5Q7RTU5 278 aa6.59□□□□□ -1.35
CDC27-201ENST00000066544 BSNQ9UPA5 3926 aa6.59□□□□□ -1.35
CDC27-201ENST00000066544 CHEK1O14757 476 aa6.59□□□□□ -1.35
CDC27-201ENST00000066544 TNFRSF13BO14836 293 aaPredicted RBP6.59□□□□□ -1.35
CDC27-201ENST00000066544 ERASQ7Z444 233 aa6.59□□□□□ -1.35
CDC27-201ENST00000066544 TEX45Q8NA69 505 aa6.59□□□□□ -1.35
CDC27-201ENST00000066544 STXBP6Q8NFX7 210 aa6.59□□□□□ -1.35
CDC27-201ENST00000066544 F11RQ9Y624 299 aaKnown RBP6.59□□□□□ -1.35
CDC27-201ENST00000066544 GP9P14770 177 aa6.59□□□□□ -1.35
CDC27-201ENST00000066544 CREBBPQ92793 2442 aa6.59□□□□□ -1.35
CDC27-201ENST00000066544 A8MWL6 223 aa6.59□□□□□ -1.35
CDC27-201ENST00000066544 IGLV1-47P01700 117 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms