RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 MCFD2Q8NI22 146 aa11.36□□□□□ -0.59
ERCC1-201ENST00000013807 FAM210BQ96KR6 192 aa11.36□□□□□ -0.59
ERCC1-201ENST00000013807 PBDC1Q9BVG4 233 aa11.36□□□□□ -0.59
ERCC1-201ENST00000013807 KRTAP17-1Q9BYP8 105 aa11.36□□□□□ -0.59
ERCC1-201ENST00000013807 TMED3Q9Y3Q3 217 aa11.36□□□□□ -0.59
ERCC1-201ENST00000013807 MED6O75586 246 aa11.35□□□□□ -0.59
ERCC1-201ENST00000013807 P0DMU3 169 aa11.35□□□□□ -0.59
ERCC1-201ENST00000013807 FAM231AP0DMU4 169 aa11.35□□□□□ -0.59
ERCC1-201ENST00000013807 FAM231CP0DMU5 169 aa11.35□□□□□ -0.59
ERCC1-201ENST00000013807 MEOX2P50222 304 aa11.35□□□□□ -0.59
ERCC1-201ENST00000013807 GGNBP1Q5YKI7 109 aa11.35□□□□□ -0.59
ERCC1-201ENST00000013807 POM121L12Q8N7R1 296 aa11.35□□□□□ -0.59
ERCC1-201ENST00000013807 CIB3Q96Q77 187 aaPredicted RBP11.35□□□□□ -0.59
ERCC1-201ENST00000013807 NDUFAF3Q9BU61 184 aa11.35□□□□□ -0.59
ERCC1-201ENST00000013807 A0A0J9YX75 114 aa11.34□□□□□ -0.59
ERCC1-201ENST00000013807 LYZP61626 148 aa11.34□□□□□ -0.59
ERCC1-201ENST00000013807 OXA1LQ15070 435 aa11.34□□□□□ -0.59
ERCC1-201ENST00000013807 OR8I2Q8N0Y5 310 aa11.34□□□□□ -0.59
ERCC1-201ENST00000013807 TOMM5Q8N4H5 51 aa11.34□□□□□ -0.59
ERCC1-201ENST00000013807 OR4D5Q8NGN0 318 aa11.34□□□□□ -0.59
ERCC1-201ENST00000013807 C17orf77Q96MU5 243 aa11.34□□□□□ -0.59
ERCC1-201ENST00000013807 NACAE9PAV3 2078 aa11.34□□□□□ -0.59
ERCC1-201ENST00000013807 TEX48A0A1B0GUV7 120 aa11.33□□□□□ -0.6
ERCC1-201ENST00000013807 SYNGR2O43760 224 aa11.33□□□□□ -0.6
ERCC1-201ENST00000013807 SFT2D2O95562 160 aa11.33□□□□□ -0.6
ERCC1-201ENST00000013807 DEFB1P60022 68 aa11.33□□□□□ -0.6
ERCC1-201ENST00000013807 RPP30P78346 268 aaKnown RBP11.33□□□□□ -0.6
ERCC1-201ENST00000013807 ZNF767PQ75MW2 155 aa11.33□□□□□ -0.6
ERCC1-201ENST00000013807 TMED4Q7Z7H5 227 aa11.33□□□□□ -0.6
ERCC1-201ENST00000013807 LINC00052Q96N35 136 aa11.33□□□□□ -0.6
ERCC1-201ENST00000013807 DKK2Q9UBU2 259 aa11.33□□□□□ -0.6
ERCC1-201ENST00000013807 RFNGQ9Y644 331 aa11.33□□□□□ -0.6
ERCC1-201ENST00000013807 V9GYH0 126 aa11.33□□□□□ -0.6
ERCC1-201ENST00000013807 HERC2O95714 4834 aa11.33□□□□□ -0.6
ERCC1-201ENST00000013807 FAT2Q9NYQ8 4349 aa11.33□□□□□ -0.6
ERCC1-201ENST00000013807 MUC4Q99102 2169 aa11.33□□□□□ -0.6
ERCC1-201ENST00000013807 UBE2MP61081 183 aaKnown RBP11.32□□□□□ -0.6
ERCC1-201ENST00000013807 PSG9Q00887 426 aa11.32□□□□□ -0.6
ERCC1-201ENST00000013807 C1orf158Q8N1D5 194 aa11.32□□□□□ -0.6
ERCC1-201ENST00000013807 COQ8AQ8NI60 647 aa11.32□□□□□ -0.6
ERCC1-201ENST00000013807 SCRT1Q9BWW7 348 aa11.32□□□□□ -0.6
ERCC1-201ENST00000013807 A0A1B0GVY2 172 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 ZNF98A6NK75 572 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 NOL3O60936 208 aaKnown RBP11.31□□□□□ -0.6
ERCC1-201ENST00000013807 IAPPP10997 89 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 VAMP1P23763 118 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 GALR1P47211 349 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 ID3Q02535 119 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 OR2F1Q13607 317 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 LGALS9BQ3B8N2 356 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 FAM78BQ5VT40 261 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 AMTNQ6UX39 209 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 OR4B1Q8NGF8 309 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 GPR82Q96P67 336 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 SLC35B3Q9H1N7 401 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 RPRMQ9NS64 109 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 KIAA1109Q2LD37 5005 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 DNAH2Q9P225 4427 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 DNAH17Q9UFH2 4485 aa11.31□□□□□ -0.6
ERCC1-201ENST00000013807 IGKV3-20P01619 116 aa11.3□□□□□ -0.6
ERCC1-201ENST00000013807 S100A7P31151 101 aa11.3□□□□□ -0.6
ERCC1-201ENST00000013807 PPP1R1AQ13522 171 aa11.3□□□□□ -0.6
ERCC1-201ENST00000013807 PYDC2Q56P42 97 aa11.3□□□□□ -0.6
ERCC1-201ENST00000013807 TMEM182Q6ZP80 229 aaPredicted RBP11.3□□□□□ -0.6
ERCC1-201ENST00000013807 CCDC190Q86UF4 302 aa11.3□□□□□ -0.6
ERCC1-201ENST00000013807 OR1B1Q8NGR6 318 aa11.3□□□□□ -0.6
ERCC1-201ENST00000013807 PPP1R14BQ96C90 147 aa11.3□□□□□ -0.6
ERCC1-201ENST00000013807 NIPSNAP3BQ9BS92 247 aa11.3□□□□□ -0.6
ERCC1-201ENST00000013807 SLC25A32Q9H2D1 315 aa11.3□□□□□ -0.6
ERCC1-201ENST00000013807 DOK5Q9P104 306 aa11.3□□□□□ -0.6
ERCC1-201ENST00000013807 GOLT1BQ9Y3E0 138 aa11.3□□□□□ -0.6
ERCC1-201ENST00000013807 F6UB75 175 aa11.29□□□□□ -0.6
ERCC1-201ENST00000013807 FXYD7P58549 80 aa11.29□□□□□ -0.6
ERCC1-201ENST00000013807 FAM222AQ5U5X8 452 aa11.29□□□□□ -0.6
ERCC1-201ENST00000013807 TMEM144Q7Z5S9 345 aa11.29□□□□□ -0.6
ERCC1-201ENST00000013807 BPIFCQ8NFQ6 507 aa11.29□□□□□ -0.6
ERCC1-201ENST00000013807 C20orf173Q96LM9 149 aa11.29□□□□□ -0.6
ERCC1-201ENST00000013807 PKHD1P08F94 4074 aa11.29□□□□□ -0.6
ERCC1-201ENST00000013807 WRBO00258 174 aa11.28□□□□□ -0.6
ERCC1-201ENST00000013807 HBE1P02100 147 aa11.28□□□□□ -0.6
ERCC1-201ENST00000013807 PLP1P60201 277 aa11.28□□□□□ -0.6
ERCC1-201ENST00000013807 RNF212Q495C1 297 aa11.28□□□□□ -0.6
ERCC1-201ENST00000013807 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.28□□□□□ -0.6
ERCC1-201ENST00000013807 C16orf92Q96LL3 132 aa11.28□□□□□ -0.6
ERCC1-201ENST00000013807 IGF2BP2-AS1Q96M15 143 aa11.28□□□□□ -0.6
ERCC1-201ENST00000013807 RSG1Q9BU20 258 aa11.28□□□□□ -0.6
ERCC1-201ENST00000013807 MAGT1Q9H0U3 335 aa11.28□□□□□ -0.6
ERCC1-201ENST00000013807 IGHV3OR16-12A0A075B7B8 117 aa11.27□□□□□ -0.61
ERCC1-201ENST00000013807 PMS2P5A8MQ11 134 aa11.27□□□□□ -0.61
ERCC1-201ENST00000013807 RTL8CO15255 209 aa11.27□□□□□ -0.61
ERCC1-201ENST00000013807 HOXB5P09067 269 aa11.27□□□□□ -0.61
ERCC1-201ENST00000013807 S100A5P33763 92 aa11.27□□□□□ -0.61
ERCC1-201ENST00000013807 RRN3P1Q2M238 152 aa11.27□□□□□ -0.61
ERCC1-201ENST00000013807 SPANXN5Q5MJ07 72 aa11.27□□□□□ -0.61
ERCC1-201ENST00000013807 Q6ZR54 194 aa11.27□□□□□ -0.61
ERCC1-201ENST00000013807 STRAPQ9Y3F4 350 aaKnown RBP11.27□□□□□ -0.61
ERCC1-201ENST00000013807 PKD1P98161 4303 aa11.26□□□□□ -0.61
ERCC1-201ENST00000013807 LOC102723971A0A1B0GUV8 181 aa11.26□□□□□ -0.61
ERCC1-201ENST00000013807 FNDC10F2Z333 226 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms