RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Timp1P12032 205 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr1386Q7TQT0 309 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Tmem106bQ80X71 275 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Sh3bgrl3Q91VW3 93 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Gm10306Q9CUK2 115 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Vax2Q9WTP9 292 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Znf431E9QAG8 526 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Csn1s2bP02664 143 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Zfp72Q0VFY0 435 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Wfdc9Q3UW41 83 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr43Q7TRX1 313 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr403Q7TRX2 313 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 H2-M10.6Q85ZW5 330 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 AmtQ8CFA2 403 aaKnown RBP13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Spaca3Q9D9X8 221 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Gtsf1Q9DAN6 167 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Arfgef3Q3UGY8 2170 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Samt2Q497M0 247 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Taar3Q5QD16 343 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Vdac1Q60932 296 aaKnown RBP13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Tob1Q61471 362 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Morn2Q6UL01 79 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Lrtm2Q8BGX3 370 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Sh2d2aQ9QXK9 374 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Kcnip3Q9QXT8 256 aa13.8□□□□□ -0.2
Shh-201ENSMUST00000002708 Gm20877J3QPZ4 227 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr1053L7MU59 313 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Rpl30P62889 115 aaKnown RBP13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 St8sia5P70126 412 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Ankrd33bQ3U0L2 486 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Rtl6Q505G4 243 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Zfp459Q8BZ17 267 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Mib2Q8R516 973 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Abhd5Q9DBL9 351 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 LenepQ9WVB6 61 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Flg2Q2VIS4 2362 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr1274-psA0A1L1SQ02 309 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 H2-M5A7VMS3 348 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Gm6594J3QM43 95 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Fgf2P15655 154 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Rpl23P62830 140 aaKnown RBP13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Wnt10aP70701 417 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Reg2Q08731 173 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Tmem41bQ8K1A5 291 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 StradbQ8K4T3 418 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Kcnmb2Q9CZM9 235 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Cox20Q9D7J4 117 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr894Q9EQB2 313 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 TncQ80YX1 2110 aa13.79□□□□□ -0.2
Shh-201ENSMUST00000002708 Ighv8-2A0A0A6YW58 119 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Mgst2A2RST1 147 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 H3BKT1 185 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Ppp1cbP62141 327 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr1446Q8VFX4 308 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Rab27bQ99P58 218 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Rbm7Q9CQT2 265 aaKnown RBP13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Cst10Q9JM84 148 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Hnf4gQ9WUU6 408 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Spta1P08032 2415 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Gm21778A0A087WNP8 232 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Foxf2O54743 446 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Bcl2P10417 236 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Fam173aQ501J2 229 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Pom121l2Q5SW25 972 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 SepsecsQ6P6M7 504 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr94Q6UAH0 386 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr1181Q7TR18 311 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 PigcQ9CXR4 297 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Syt13Q9EQT6 426 aa13.78□□□□□ -0.2
Shh-201ENSMUST00000002708 Gm21789J3QMZ1 123 aa13.77□□□□□ -0.2
Shh-201ENSMUST00000002708 Gm21870J3QPN2 123 aa13.77□□□□□ -0.2
Shh-201ENSMUST00000002708 Gm21883J3QPV3 123 aa13.77□□□□□ -0.2
Shh-201ENSMUST00000002708 VhlP40338 181 aa13.77□□□□□ -0.2
Shh-201ENSMUST00000002708 Gnb2P62880 340 aa13.77□□□□□ -0.2
Shh-201ENSMUST00000002708 Taar5Q5QD14 337 aa13.77□□□□□ -0.2
Shh-201ENSMUST00000002708 Sp110Q8BVK9 445 aa13.77□□□□□ -0.2
Shh-201ENSMUST00000002708 Q8C708 225 aa13.77□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr482Q8VG03 323 aa13.77□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr167Q8VGJ5 312 aa13.77□□□□□ -0.2
Shh-201ENSMUST00000002708 Cacna1aP97445 2368 aa13.77□□□□□ -0.2
Shh-201ENSMUST00000002708 Cdc34bA0A140T8I4 237 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr573-ps1A0A1B0GRU2 297 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Gm9376G3UW68 176 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Klrd1O54707 179 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Tbpl2Q6SJ95 350 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Prss45Q8K4I7 317 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Rpp21Q8R040 150 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Prodh2Q8VCZ9 456 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr360Q8VFP3 317 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr715Q8VG49 315 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 S1pr5Q91X56 400 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Olfr465-ps1A0A0U1RPZ4 315 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Samt3A2ARK7 233 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Zfp972A2AW65 139 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Wdr86D3Z757 380 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 E430018J23RikE9PZQ8 461 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Gm21746J3QMM6 180 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 OsmP53347 263 aa13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Ube2nP61089 152 aaKnown RBP13.77□□□□□ -0.21
Shh-201ENSMUST00000002708 Znf664Q4VA44 261 aa13.77□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms