RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 DUX3Q96PT4 197 aa13.46□□□□□ -0.26
PHGDH-230ENST00000641927 KCNIP2Q9NS61 270 aa13.46□□□□□ -0.26
PHGDH-230ENST00000641927 SLC45A2Q9UMX9 530 aa13.46□□□□□ -0.26
PHGDH-230ENST00000641927 PXMP4Q9Y6I8 212 aa13.46□□□□□ -0.26
PHGDH-230ENST00000641927 TOMM40O96008 361 aa13.45□□□□□ -0.26
PHGDH-230ENST00000641927 LINC00869P0C866 280 aa13.45□□□□□ -0.26
PHGDH-230ENST00000641927 RPEL1Q2QD12 228 aa13.45□□□□□ -0.26
PHGDH-230ENST00000641927 C12orf54Q6X4T0 127 aa13.45□□□□□ -0.26
PHGDH-230ENST00000641927 ZNF600Q6ZNG1 722 aa13.45□□□□□ -0.26
PHGDH-230ENST00000641927 NDUFA11Q86Y39 141 aa13.45□□□□□ -0.26
PHGDH-230ENST00000641927 ARV1Q9H2C2 271 aa13.45□□□□□ -0.26
PHGDH-230ENST00000641927 PUS1Q9Y606 427 aaKnown RBP eCLIP13.45□□□□□ -0.26
PHGDH-230ENST00000641927 RPL29P47914 159 aaKnown RBP13.44□□□□□ -0.26
PHGDH-230ENST00000641927 ELLP55199 621 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-230ENST00000641927 B2MP61769 119 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 C3orf56Q8N813 242 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 OR1N2Q8NGR9 330 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 OR2G3Q8NGZ4 309 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 PBDC1Q9BVG4 233 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 TIMM9Q9Y5J7 89 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 IGHV3OR16-8A0A075B7F1 116 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 LINC01619G3V211 115 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 TSPAN15O95858 294 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 IL4P05112 153 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 LYZP61626 148 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 FFAR4Q5NUL3 377 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 Q6ZRG5 221 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 OR51G1Q8NGK1 321 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 TMED6Q8WW62 240 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 CITED1Q99966 193 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 SLC39A9Q9NUM3 307 aa13.44□□□□□ -0.26
PHGDH-230ENST00000641927 ZNF320A2RRD8 509 aa13.43□□□□□ -0.26
PHGDH-230ENST00000641927 SPP1P10451 314 aa13.43□□□□□ -0.26
PHGDH-230ENST00000641927 ORM2P19652 201 aa13.43□□□□□ -0.26
PHGDH-230ENST00000641927 HOXD3P31249 432 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-230ENST00000641927 PRR20EP86478 221 aa13.43□□□□□ -0.26
PHGDH-230ENST00000641927 PRR20CP86479 221 aa13.43□□□□□ -0.26
PHGDH-230ENST00000641927 PRR20DP86480 221 aa13.43□□□□□ -0.26
PHGDH-230ENST00000641927 PRR20BP86481 221 aa13.43□□□□□ -0.26
PHGDH-230ENST00000641927 PRR20AP86496 221 aa13.43□□□□□ -0.26
PHGDH-230ENST00000641927 OR1B1Q8NGR6 318 aa13.43□□□□□ -0.26
PHGDH-230ENST00000641927 PSMG3Q9BT73 122 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-230ENST00000641927 C20orf24Q9BUV8 137 aa13.43□□□□□ -0.26
PHGDH-230ENST00000641927 DOK5Q9P104 306 aa13.43□□□□□ -0.26
PHGDH-230ENST00000641927 ADARB2-AS1A8MUL3 147 aa13.42□□□□□ -0.26
PHGDH-230ENST00000641927 CCL24O00175 119 aa13.42□□□□□ -0.26
PHGDH-230ENST00000641927 ZP3P21754 424 aa13.42□□□□□ -0.26
PHGDH-230ENST00000641927 EIF5AL1Q6IS14 154 aaKnown RBP13.42□□□□□ -0.26
PHGDH-230ENST00000641927 TEX261Q6UWH6 196 aa13.42□□□□□ -0.26
PHGDH-230ENST00000641927 TOMM20LQ6UXN7 152 aa13.42□□□□□ -0.26
PHGDH-230ENST00000641927 RCC1LQ96I51 464 aaKnown RBP13.42□□□□□ -0.26
PHGDH-230ENST00000641927 RAX2Q96IS3 184 aa13.42□□□□□ -0.26
PHGDH-230ENST00000641927 CFDP00746 253 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-230ENST00000641927 SLURP1P55000 103 aa13.41□□□□□ -0.26
PHGDH-230ENST00000641927 FAM106AQ4KMX7 169 aa13.41□□□□□ -0.26
PHGDH-230ENST00000641927 ZNF767PQ75MW2 155 aa13.41□□□□□ -0.26
PHGDH-230ENST00000641927 RNF125Q96EQ8 232 aa13.41□□□□□ -0.26
PHGDH-230ENST00000641927 NDUFA4O00483 81 aa13.4□□□□□ -0.26
PHGDH-230ENST00000641927 OR5G3P0C626 314 aa13.4□□□□□ -0.26
PHGDH-230ENST00000641927 SEC11BP0C7V7 166 aa13.4□□□□□ -0.26
PHGDH-230ENST00000641927 SERF2P84101 59 aa13.4□□□□□ -0.26
PHGDH-230ENST00000641927 ALKAL2Q6UX46 152 aa13.4□□□□□ -0.26
PHGDH-230ENST00000641927 UNQ9165/PRO28630Q6UXU0 137 aa13.4□□□□□ -0.26
PHGDH-230ENST00000641927 ZNF747Q9BV97 191 aa13.4□□□□□ -0.26
PHGDH-230ENST00000641927 TENM1Q9UKZ4 2725 aa13.4□□□□□ -0.26
PHGDH-230ENST00000641927 ZNF207O43670 478 aaKnown RBP13.4□□□□□ -0.26
PHGDH-230ENST00000641927 COX7A2P2O60397 106 aa13.4□□□□□ -0.26
PHGDH-230ENST00000641927 SYNJ2BPP57105 145 aa13.4□□□□□ -0.26
PHGDH-230ENST00000641927 GCSAMLQ5JQS6 135 aa13.4□□□□□ -0.26
PHGDH-230ENST00000641927 AKR1C8PQ5T2L2 129 aa13.4□□□□□ -0.26
PHGDH-230ENST00000641927 GPHB5Q86YW7 130 aa13.4□□□□□ -0.26
PHGDH-230ENST00000641927 ZNF414Q96IQ9 312 aa13.4□□□□□ -0.26
PHGDH-230ENST00000641927 WI2-2373I1.2A0A1W2PRP0 233 aa13.39□□□□□ -0.27
PHGDH-230ENST00000641927 HYPMO75409 117 aa13.39□□□□□ -0.27
PHGDH-230ENST00000641927 IFNA7P01567 189 aa13.39□□□□□ -0.27
PHGDH-230ENST00000641927 USF2Q15853 346 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-230ENST00000641927 ACOT6Q3I5F7 207 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-230ENST00000641927 ZFAND3Q9H8U3 227 aa13.39□□□□□ -0.27
PHGDH-230ENST00000641927 RAB2AP61019 212 aa13.38□□□□□ -0.27
PHGDH-230ENST00000641927 ZNF680Q8NEM1 530 aa13.38□□□□□ -0.27
PHGDH-230ENST00000641927 OR1L4Q8NGR5 311 aa13.38□□□□□ -0.27
PHGDH-230ENST00000641927 TMEM190Q8WZ59 177 aa13.38□□□□□ -0.27
PHGDH-230ENST00000641927 PHYHIPLQ96FC7 376 aa13.38□□□□□ -0.27
PHGDH-230ENST00000641927 VSIRQ9H7M9 311 aa13.38□□□□□ -0.27
PHGDH-230ENST00000641927 DNAJC4Q9NNZ3 241 aa13.38□□□□□ -0.27
PHGDH-230ENST00000641927 MBP02144 154 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 PF4P02776 101 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 M6PRP20645 277 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 FHL3Q13643 280 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 FAM74A1Q5RGS3 127 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 PXDC1Q5TGL8 231 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 C10orf113Q5VZT2 155 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 C1QL4Q86Z23 238 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 OR10G4Q8NGN3 311 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 OR10G9Q8NGN4 311 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 OR10G7Q8NGN6 311 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 UHRF2Q96PU4 802 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 PFDN5Q99471 154 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 RABAC1Q9UI14 185 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 HIGD1AQ9Y241 93 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms