RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-229	ENST00000641891	RD3L	P0DJH9	198 aa		13.45	□□□□□ -0.26
PHGDH-229	ENST00000641891	PSG1	P11464	419 aa		13.45	□□□□□ -0.26
PHGDH-229	ENST00000641891	PDLIM4	P50479	330 aa		13.45	□□□□□ -0.26
PHGDH-229	ENST00000641891	HOXB4	P17483	251 aa	Predicted RBP	13.45	□□□□□ -0.26
PHGDH-229	ENST00000641891	LYZ	P61626	148 aa		13.45	□□□□□ -0.26
PHGDH-229	ENST00000641891	KLF17	Q5JT82	389 aa	Predicted RBP	13.45	□□□□□ -0.26
PHGDH-229	ENST00000641891	CDC42EP3	Q9UKI2	254 aa		13.45	□□□□□ -0.26
PHGDH-229	ENST00000641891	SPINK4	O60575	86 aa		13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891	NDUFA3	O95167	84 aa		13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891	SFTPC	P11686	197 aa		13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891	MYCNOS	P40205	109 aa		13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891	TCL1A	P56279	114 aa		13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891	NPB	Q8NG41	125 aa		13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891	OR1L6	Q8NGR2	347 aa		13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891		A6NNC1	897 aa		13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891		K7EIM0	57 aa		13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891	ISLR	O14498	428 aa		13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891	GP9	P14770	177 aa		13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891	YPEL3	P61236	119 aa	Predicted RBP	13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891	SGK494	Q96LW2	274 aa		13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891	OSTC	Q9NRP0	149 aa		13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891	RPH3AL	Q9UNE2	315 aa		13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891		S4R3C0	116 aa		13.44	□□□□□ -0.26
PHGDH-229	ENST00000641891	CA1	P00915	261 aa	Predicted RBP	13.43	□□□□□ -0.26
PHGDH-229	ENST00000641891	IER3	P46695	156 aa		13.43	□□□□□ -0.26
PHGDH-229	ENST00000641891	SLC35B1	P78383	322 aa		13.43	□□□□□ -0.26
PHGDH-229	ENST00000641891	IBA57	Q5T440	356 aa	Known RBP	13.43	□□□□□ -0.26
PHGDH-229	ENST00000641891	SPTBN1	Q01082	2364 aa	Known RBP	13.43	□□□□□ -0.26
PHGDH-229	ENST00000641891	TRAV9-1	A0A075B6T8	112 aa		13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	IGKV1-17	P01599	117 aa		13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	HIST1H1B	P16401	226 aa	Known RBP	13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	TAS2R60	P59551	318 aa		13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	PLP1	P60201	277 aa		13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	C5orf64	Q2M2E5	130 aa		13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	SERTAD4	Q9NUC0	356 aa		13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	HIGD1A	Q9Y241	93 aa		13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	GRIFIN	A4D1Z8	144 aa		13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	PGP	A6NDG6	321 aa		13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	SLC25A5	P05141	298 aa	Known RBP	13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	NBEAP1	P0C6P0	100 aa		13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	TMEM256	Q8N2U0	113 aa		13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	STXBP6	Q8NFX7	210 aa		13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	FAM168A	Q92567	244 aa		13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	RASL11B	Q9BPW5	248 aa		13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	SRSF8	Q9BRL6	282 aa	Known RBP	13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	MRPL18	Q9H0U6	180 aa	Known RBP	13.42	□□□□□ -0.26
PHGDH-229	ENST00000641891	NDP	Q00604	133 aa		13.41	□□□□□ -0.26
PHGDH-229	ENST00000641891	BAGE2	Q86Y30	109 aa		13.41	□□□□□ -0.26
PHGDH-229	ENST00000641891	EPDR1	Q9UM22	224 aa		13.41	□□□□□ -0.26
PHGDH-229	ENST00000641891	NCBP2L	A6PVI3	153 aa	Known RBP	13.41	□□□□□ -0.26
PHGDH-229	ENST00000641891	NUPR1	O60356	82 aa		13.41	□□□□□ -0.26
PHGDH-229	ENST00000641891	KIR3DL3	Q8N743	410 aa		13.41	□□□□□ -0.26
PHGDH-229	ENST00000641891	RBM14	Q96PK6	669 aa	Known RBP	13.41	□□□□□ -0.26
PHGDH-229	ENST00000641891	SIRPD	Q9H106	197 aa		13.41	□□□□□ -0.26
PHGDH-229	ENST00000641891	ASH1L	Q9NR48	2969 aa	Known RBP	13.41	□□□□□ -0.26
PHGDH-229	ENST00000641891	SVEP1	Q4LDE5	3571 aa		13.41	□□□□□ -0.26
PHGDH-229	ENST00000641891	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.4	□□□□□ -0.26
PHGDH-229	ENST00000641891	EFNA4	P52798	201 aa		13.4	□□□□□ -0.26
PHGDH-229	ENST00000641891	ZNF600	Q6ZNG1	722 aa		13.4	□□□□□ -0.26
PHGDH-229	ENST00000641891	C1orf122	Q6ZSJ8	110 aa		13.4	□□□□□ -0.26
PHGDH-229	ENST00000641891	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.4	□□□□□ -0.26
PHGDH-229	ENST00000641891	SNURFL	B1AK76	121 aa		13.39	□□□□□ -0.27
PHGDH-229	ENST00000641891	CX3CL1	P78423	397 aa		13.39	□□□□□ -0.27
PHGDH-229	ENST00000641891	PRR27	Q6MZM9	219 aa		13.39	□□□□□ -0.27
PHGDH-229	ENST00000641891	PRDM13	Q9H4Q3	707 aa		13.39	□□□□□ -0.27
PHGDH-229	ENST00000641891	GBGT1	Q8N5D6	347 aa		13.39	□□□□□ -0.27
PHGDH-229	ENST00000641891	BPESC1	Q9GZL8	116 aa		13.39	□□□□□ -0.27
PHGDH-229	ENST00000641891		Q9H3A6	140 aa		13.39	□□□□□ -0.27
PHGDH-229	ENST00000641891	ABCA1	O95477	2261 aa		13.39	□□□□□ -0.27
PHGDH-229	ENST00000641891	TMEM183B	Q1AE95	376 aa		13.38	□□□□□ -0.27
PHGDH-229	ENST00000641891	CCDC144NL	Q6NUI1	221 aa		13.38	□□□□□ -0.27
PHGDH-229	ENST00000641891		Q8N6K4	173 aa		13.38	□□□□□ -0.27
PHGDH-229	ENST00000641891	ARPC1A	Q92747	370 aa		13.38	□□□□□ -0.27
PHGDH-229	ENST00000641891	IGHV2-70D	A0A0C4DH43	119 aa		13.38	□□□□□ -0.27
PHGDH-229	ENST00000641891	SMIM27	A0A1W2PRY6	76 aa		13.38	□□□□□ -0.27
PHGDH-229	ENST00000641891	UBE2G1	P62253	170 aa		13.38	□□□□□ -0.27
PHGDH-229	ENST00000641891	MRPL54	Q6P161	138 aa	Known RBP	13.38	□□□□□ -0.27
PHGDH-229	ENST00000641891	FANCD2OS	Q96PS1	177 aa		13.38	□□□□□ -0.27
PHGDH-229	ENST00000641891	ZNF586	Q9NXT0	402 aa		13.38	□□□□□ -0.27
PHGDH-229	ENST00000641891	MRPL27	Q9P0M9	148 aa	Known RBP	13.38	□□□□□ -0.27
PHGDH-229	ENST00000641891	TP53TG3	Q9ULZ0	132 aa		13.38	□□□□□ -0.27
PHGDH-229	ENST00000641891	TOX4	O94842	621 aa		13.37	□□□□□ -0.27
PHGDH-229	ENST00000641891	GZMB	P10144	247 aa		13.37	□□□□□ -0.27
PHGDH-229	ENST00000641891	CTAG1A	P78358	180 aa		13.37	□□□□□ -0.27
PHGDH-229	ENST00000641891	FAM120AOS	Q5T036	256 aa		13.37	□□□□□ -0.27
PHGDH-229	ENST00000641891	TBX15	Q96SF7	602 aa		13.37	□□□□□ -0.27
PHGDH-229	ENST00000641891	C7orf69	Q9H7B7	122 aa		13.37	□□□□□ -0.27
PHGDH-229	ENST00000641891	TMEM11	P17152	192 aa		13.37	□□□□□ -0.27
PHGDH-229	ENST00000641891	JOSD1	Q15040	202 aa	Predicted RBP	13.37	□□□□□ -0.27
PHGDH-229	ENST00000641891	MINOS1	Q5TGZ0	78 aa		13.37	□□□□□ -0.27
PHGDH-229	ENST00000641891	ZNF562	Q6V9R5	426 aa		13.37	□□□□□ -0.27
PHGDH-229	ENST00000641891	NUDT10	Q8NFP7	164 aa		13.37	□□□□□ -0.27
PHGDH-229	ENST00000641891	NUDT11	Q96G61	164 aa		13.37	□□□□□ -0.27
PHGDH-229	ENST00000641891	MINOS1-NBL1	R4GNA1	71 aa		13.37	□□□□□ -0.27
PHGDH-229	ENST00000641891		F2Z2F3	143 aa		13.36	□□□□□ -0.27
PHGDH-229	ENST00000641891	PRB4	P10163	310 aa	Predicted RBP	13.36	□□□□□ -0.27
PHGDH-229	ENST00000641891	LMO4	P61968	165 aa		13.36	□□□□□ -0.27
PHGDH-229	ENST00000641891	TMEM136	Q6ZRR5	245 aa		13.36	□□□□□ -0.27
PHGDH-229	ENST00000641891	BCL6B	Q8N143	479 aa	Predicted RBP	13.36	□□□□□ -0.27
PHGDH-229	ENST00000641891	EXOC3-AS1	Q8N2X6	119 aa		13.36	□□□□□ -0.27

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