RNA–Protein interactions for RNA: ENST00000640853.1

LPP-222, Transcript of LIM domain containing preferred translocation partner in lipoma, human

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LPP-222	ENST00000640853	NRN1	Q9NPD7	142 aa		2.56	□□□□□ -2
LPP-222	ENST00000640853	TCF20	Q9UGU0	1960 aa	Known RBP	2.56	□□□□□ -2
LPP-222	ENST00000640853	TMSB15B	A0A087X1C1	80 aa		2.56	□□□□□ -2
LPP-222	ENST00000640853	RBFOX2	O43251	390 aa	Known RBP eCLIP	2.56	□□□□□ -2
LPP-222	ENST00000640853	MEF2C	Q06413	473 aa	Predicted RBP	2.56	□□□□□ -2
LPP-222	ENST00000640853	RFNG	Q9Y644	331 aa		2.56	□□□□□ -2
LPP-222	ENST00000640853	TMEM78	Q5T7P6	136 aa		2.56	□□□□□ -2
LPP-222	ENST00000640853	APOH	P02749	345 aa	Predicted RBP	2.56	□□□□□ -2
LPP-222	ENST00000640853	ANOS1	P23352	680 aa		2.56	□□□□□ -2
LPP-222	ENST00000640853	SNRPD3	P62318	126 aa	Known RBP	2.56	□□□□□ -2
LPP-222	ENST00000640853	CCL8	P80075	99 aa		2.56	□□□□□ -2
LPP-222	ENST00000640853	SHISA2	Q6UWI4	295 aa		2.56	□□□□□ -2
LPP-222	ENST00000640853		Q6ZT83	130 aa		2.56	□□□□□ -2
LPP-222	ENST00000640853	SMPX	Q9UHP9	88 aa		2.56	□□□□□ -2
LPP-222	ENST00000640853	ZNF257	Q9Y2Q1	563 aa		2.56	□□□□□ -2
LPP-222	ENST00000640853	RFPL3S	P0C7P2	107 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	LHFPL1	Q86WI0	220 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	COQ2	Q96H96	371 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	SLC25A2	Q9BXI2	301 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	WNT10A	Q9GZT5	417 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	HILPDA	Q9Y5L2	63 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	PAPPA	Q13219	1627 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	IGHV3-21	A0A0B4J1V1	117 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	RHOD	O00212	210 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	CCL21	O00585	134 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	ESD	P10768	282 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	CDCP2	Q5VXM1	449 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	ZNF503	Q96F45	646 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	NABP2	Q9BQ15	211 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	ANAPC10	Q9UM13	185 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	IGHV3-72	A0A0B4J1Y9	119 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	MIR17HG	Q75NE6	70 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	DDB2	Q92466	427 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	TRGV9	Q99603	122 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	GRIFIN	A4D1Z8	144 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	TEX43	Q6ZNM6	134 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	RNF144B	Q7Z419	303 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	SIGLEC12	Q96PQ1	595 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	LSM4	Q9Y4Z0	139 aa	Known RBP	2.55	□□□□□ -2
LPP-222	ENST00000640853	IGKV1-12	A0A0C4DH73	117 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853		A0A1W2PRD5	423 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853		A0A1W2PRF3	423 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853		A0A1W2PRM7	423 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	IGKV1D-12	P01611	117 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	RNASE4	P34096	147 aa	Known RBP	2.55	□□□□□ -2
LPP-222	ENST00000640853	C2orf82	Q6UX34	121 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	FABP5P3	A8MUU1	101 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	UMOD	P07911	640 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	GEMIN7	Q9H840	131 aa	Known RBP	2.55	□□□□□ -2
LPP-222	ENST00000640853	LPAR2	Q9HBW0	351 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	NPIPB6	E9PJ23	425 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	RRH	O14718	337 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	EFNA2	O43921	213 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	PPBP	P02775	128 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	ZNF883	P0CG24	379 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	ORMDL3	Q8N138	153 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	SYS1-DBNDD2	H3BUS1	97 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853		Q6P435	159 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	TEN1	Q86WV5	123 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	FOXA2	Q9Y261	457 aa	Predicted RBP	2.55	□□□□□ -2
LPP-222	ENST00000640853	WDR83OS	Q9Y284	106 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	C17orf98	A8MV24	154 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	CX3CL1	P78423	397 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	ACTL10	Q5JWF8	245 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	NEUROG1	Q92886	237 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	NXT2	Q9NPJ8	142 aa	Known RBP	2.55	□□□□□ -2
LPP-222	ENST00000640853	F11R	Q9Y624	299 aa	Known RBP	2.55	□□□□□ -2
LPP-222	ENST00000640853	TIAF1	O95411	115 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	KIF13B	Q9NQT8	1826 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	PRR19	A6NJB7	356 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853		H3BRM9	83 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	PAX4	O43316	350 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	MOS	P00540	346 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	CGA	P01215	116 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	TFF3	Q07654	80 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	MPV17L2	Q567V2	206 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	SLC25A48	Q6ZT89	311 aa	Known RBP	2.55	□□□□□ -2
LPP-222	ENST00000640853	ATP5L2	Q7Z4Y8	100 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	ZIC4	Q8N9L1	334 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	LYPD6B	Q8NI32	183 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	IGKV3D-15	A0A087WSY6	115 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	LOXL3	P58215	753 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	C19orf54	Q5BKX5	351 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	PDCD11	Q14690	1871 aa	Known RBP	2.55	□□□□□ -2
LPP-222	ENST00000640853	IGKV1D-13	A0A0B4J2D9	117 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853		A0A1B0GWB2	263 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	TMEM238	C9JI98	176 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853		F2Z2F3	143 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	NDUFA3	O95167	84 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	IGKV1-13	P0DP09	117 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	DLX6	P56179	175 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	ZNF646	O15015	1829 aa	Predicted RBP	2.55	□□□□□ -2
LPP-222	ENST00000640853	SERF1A	O75920	110 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	SAMD5	Q5TGI4	173 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	TMEM42	Q69YG0	159 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853	ZNF562	Q6V9R5	426 aa		2.55	□□□□□ -2
LPP-222	ENST00000640853		H7C2G1	150 aa		2.54	□□□□□ -2
LPP-222	ENST00000640853	HIST1H4A	P62805	103 aa	Known RBP	2.54	□□□□□ -2
LPP-222	ENST00000640853	NEU4	Q8WWR8	484 aa	Predicted RBP	2.54	□□□□□ -2
LPP-222	ENST00000640853	ZNF837	Q96EG3	531 aa	Predicted RBP	2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms