RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	DUSP14	O95147	198 aa	Known RBP	4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	APOH	P02749	345 aa	Predicted RBP	4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	FOXA3	P55318	350 aa	Predicted RBP	4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	KLF17	Q5JT82	389 aa	Predicted RBP	4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	SPANXN5	Q5MJ07	72 aa		4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	SLC48A1	Q6P1K1	146 aa		4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	PQLC2	Q6ZP29	291 aa		4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	ATP5L2	Q7Z4Y8	100 aa		4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	ARL17A	Q8IVW1	177 aa		4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	RPP25L	Q8N5L8	163 aa	Known RBP	4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	OR51H1	Q8NH63	302 aa		4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	OTOS	Q8NHW6	89 aa		4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	DPH3	Q96FX2	82 aa		4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	DLL3	Q9NYJ7	618 aa		4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	PSENEN	Q9NZ42	101 aa		4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	TRAV26-2	A0A0B4J265	109 aa		4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	CFP	P27918	469 aa		4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	ZPLD1	Q8TCW7	415 aa		4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	OTOR	Q9NRC9	128 aa		4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	CACNG5	Q9UF02	275 aa		4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.99	□□□□□ -1.61
NECAP1-222	ENST00000640072		A8MWV9	139 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072		F6UB75	175 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	FXYD3	Q14802	87 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	PIP4P1	Q86T03	277 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	TAF15	Q92804	592 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	RNF166	Q96A37	237 aa	Predicted RBP	4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	ABHD14B	Q96IU4	210 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	GOLGA2P5	Q9HBQ8	144 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	FAM60A	Q9NP50	221 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	LOC285556	D6RIA3	1793 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	DOCK1	Q14185	1865 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072		A0A1B0GWA3	101 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	LMX1B	O60663	402 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	PLAU	P00749	431 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	ZNF823	P16415	610 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	PRIMA1	Q86XR5	153 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	LY6G5B	Q8NDX9	201 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	H1FX	Q92522	213 aa	Known RBP	4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	C18orf12	Q96KH6	178 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	CHCHD5	Q9BSY4	110 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	POLE	Q07864	2286 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	TNRC6C	Q9HCJ0	1690 aa	Known RBP	4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	PATJ	Q8NI35	1801 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072		A0A0D9SEW6	157 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	C3orf85	A0A1B0GTC6	90 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	IGLL5	B9A064	214 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	PSMB2	P49721	201 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	DAZ2	Q13117	558 aa	Known RBP	4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	SP5	Q6BEB4	398 aa	Predicted RBP	4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	DAZ4	Q86SG3	579 aa	Known RBP	4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	IGFBPL1	Q8WX77	278 aa		4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	DAZ1	Q9NQZ3	744 aa	Known RBP	4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	DAZ3	Q9NR90	486 aa	Known RBP	4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	DNAJB12	Q9NXW2	375 aa	Known RBP	4.98	□□□□□ -1.61
NECAP1-222	ENST00000640072	PDE4DIP	Q5VU43	2346 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	TRAV4	A0A0B4J268	109 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	KNCN	A6PVL3	124 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	FKBP1A	P62942	108 aa	Known RBP	4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	LINC01590	Q5TEZ4	76 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	MORN3	Q6PF18	240 aa	Predicted RBP	4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	LINC00173	Q6ZV60	143 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	C9orf139	Q6ZV77	190 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	CIART	Q8N365	385 aa	Predicted RBP	4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	DCAF4L2	Q8NA75	395 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	OR8A1	Q8NGG7	326 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	DLX4	Q92988	240 aa	Predicted RBP	4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	MBD6	Q96DN6	1003 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	AJUBA	Q96IF1	538 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	GPHA2	Q96T91	129 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	STARD5	Q9NSY2	213 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	CLDN14	O95500	239 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	CTLA4	P16410	223 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	NPPC	P23582	126 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	FXYD2	P54710	66 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	TMEM258	P61165	79 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	ZNF672	Q499Z4	452 aa	Predicted RBP	4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	LRRC29	Q8WV35	223 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	S1PR3	Q99500	378 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	ZSWIM8	A7E2V4	1837 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	LCT	P09848	1927 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	FANCM	Q8IYD8	2048 aa		4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	PHF3	Q92576	2039 aa	Known RBP	4.97	□□□□□ -1.61
NECAP1-222	ENST00000640072	ANKRD36	A6QL64	1941 aa		4.96	□□□□□ -1.61
NECAP1-222	ENST00000640072	SRRM4	A7MD48	611 aa	Known RBP	4.96	□□□□□ -1.61
NECAP1-222	ENST00000640072		A8MWL6	223 aa		4.96	□□□□□ -1.61
NECAP1-222	ENST00000640072		E9PLD3	99 aa		4.96	□□□□□ -1.61
NECAP1-222	ENST00000640072	C11orf98	E9PRG8	122 aa		4.96	□□□□□ -1.61
NECAP1-222	ENST00000640072	IL4	P05112	153 aa		4.96	□□□□□ -1.61
NECAP1-222	ENST00000640072	SCGB1C2	P0DMR2	95 aa		4.96	□□□□□ -1.61
NECAP1-222	ENST00000640072	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.96	□□□□□ -1.61
NECAP1-222	ENST00000640072	KIF26B	Q2KJY2	2108 aa		4.96	□□□□□ -1.61
NECAP1-222	ENST00000640072	AAED1	Q7RTV5	226 aa		4.96	□□□□□ -1.61
NECAP1-222	ENST00000640072	RPS19BP1	Q86WX3	136 aa	Known RBP	4.96	□□□□□ -1.61
NECAP1-222	ENST00000640072	GPX7	Q96SL4	187 aa	Predicted RBP	4.96	□□□□□ -1.61
NECAP1-222	ENST00000640072	DSCR8	Q96T75	97 aa		4.96	□□□□□ -1.61
NECAP1-222	ENST00000640072	SCO2	A0A1W2PP80	73 aa		4.96	□□□□□ -1.62
NECAP1-222	ENST00000640072	SRSF10	O75494	262 aa	Known RBP	4.96	□□□□□ -1.62
NECAP1-222	ENST00000640072	SAA4	P35542	130 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms