RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 SEPSECSQ9HD40 501 aaKnown RBP12.16□□□□□ -0.46
SMN2-216ENST00000638794 CACFD1Q9UGQ2 172 aa12.16□□□□□ -0.46
SMN2-216ENST00000638794 ANKRD20A5PA0PJZ0 165 aa12.15□□□□□ -0.46
SMN2-216ENST00000638794 H3BMM0 161 aa12.15□□□□□ -0.46
SMN2-216ENST00000638794 ZNF767PQ75MW2 155 aa12.15□□□□□ -0.46
SMN2-216ENST00000638794 OR51G1Q8NGK1 321 aa12.15□□□□□ -0.46
SMN2-216ENST00000638794 RNF125Q96EQ8 232 aa12.15□□□□□ -0.46
SMN2-216ENST00000638794 XCL2Q9UBD3 114 aa12.15□□□□□ -0.46
SMN2-216ENST00000638794 HSPB7Q9UBY9 170 aa12.15□□□□□ -0.46
SMN2-216ENST00000638794 KCNIP3Q9Y2W7 256 aa12.15□□□□□ -0.46
SMN2-216ENST00000638794 U3KQ87 197 aa12.15□□□□□ -0.46
SMN2-216ENST00000638794 DNAH17Q9UFH2 4485 aa12.14□□□□□ -0.47
SMN2-216ENST00000638794 CCR6P51684 374 aa12.14□□□□□ -0.47
SMN2-216ENST00000638794 NUTF2P61970 127 aaKnown RBP12.14□□□□□ -0.47
SMN2-216ENST00000638794 C12orf74Q32Q52 190 aa12.14□□□□□ -0.47
SMN2-216ENST00000638794 LYZL2Q7Z4W2 148 aa12.14□□□□□ -0.47
SMN2-216ENST00000638794 LGI3Q8N145 548 aa12.14□□□□□ -0.47
SMN2-216ENST00000638794 DTD1Q8TEA8 209 aa12.14□□□□□ -0.47
SMN2-216ENST00000638794 C1QTNF4Q9BXJ3 329 aa12.14□□□□□ -0.47
SMN2-216ENST00000638794 RBKSQ9H477 322 aa12.14□□□□□ -0.47
SMN2-216ENST00000638794 RABL2AQ9UBK7 228 aaPredicted RBP12.14□□□□□ -0.47
SMN2-216ENST00000638794 SCP2D1Q9UJQ7 156 aa12.14□□□□□ -0.47
SMN2-216ENST00000638794 RABL2BQ9UNT1 228 aa12.14□□□□□ -0.47
SMN2-216ENST00000638794 KIAA1109Q2LD37 5005 aa12.14□□□□□ -0.47
SMN2-216ENST00000638794 PKHD1P08F94 4074 aa12.13□□□□□ -0.47
SMN2-216ENST00000638794 A0A0B4J2A0 478 aa12.13□□□□□ -0.47
SMN2-216ENST00000638794 HLA-DRB4P13762 266 aa12.13□□□□□ -0.47
SMN2-216ENST00000638794 AKR1C4P17516 323 aa12.13□□□□□ -0.47
SMN2-216ENST00000638794 SUPT4H1P63272 117 aaKnown RBP12.13□□□□□ -0.47
SMN2-216ENST00000638794 KLF9Q13886 244 aaPredicted RBP12.13□□□□□ -0.47
SMN2-216ENST00000638794 SMCO1Q147U7 214 aa12.13□□□□□ -0.47
SMN2-216ENST00000638794 DYNC2LI1Q8TCX1 351 aa12.13□□□□□ -0.47
SMN2-216ENST00000638794 RNF126Q9BV68 326 aa12.13□□□□□ -0.47
SMN2-216ENST00000638794 PBDC1Q9BVG4 233 aa12.13□□□□□ -0.47
SMN2-216ENST00000638794 MCUBQ9NWR8 336 aa12.13□□□□□ -0.47
SMN2-216ENST00000638794 CCDC59Q9P031 241 aaKnown RBP12.13□□□□□ -0.47
SMN2-216ENST00000638794 SHPKQ9UHJ6 478 aa12.13□□□□□ -0.47
SMN2-216ENST00000638794 HLA-DRB4X5D2U9 266 aa12.13□□□□□ -0.47
SMN2-216ENST00000638794 DEFB131BA0A096LNP1 70 aa12.12□□□□□ -0.47
SMN2-216ENST00000638794 DEFB1P60022 68 aa12.12□□□□□ -0.47
SMN2-216ENST00000638794 ZNF90Q03938 601 aa12.12□□□□□ -0.47
SMN2-216ENST00000638794 GDF5OSQ5U4N7 250 aa12.12□□□□□ -0.47
SMN2-216ENST00000638794 SCGB3A2Q96PL1 93 aa12.12□□□□□ -0.47
SMN2-216ENST00000638794 IGKV1D-37A0A075B6S9 117 aa12.11□□□□□ -0.47
SMN2-216ENST00000638794 ZFP92A6NM28 416 aa12.11□□□□□ -0.47
SMN2-216ENST00000638794 AMBPP02760 352 aa12.11□□□□□ -0.47
SMN2-216ENST00000638794 NUP62P37198 522 aaPredicted RBP12.11□□□□□ -0.47
SMN2-216ENST00000638794 NKX2-1P43699 371 aaPredicted RBP12.11□□□□□ -0.47
SMN2-216ENST00000638794 GAMTQ14353 236 aa12.11□□□□□ -0.47
SMN2-216ENST00000638794 OR8G2PQ6IF36 304 aa12.11□□□□□ -0.47
SMN2-216ENST00000638794 RAB2BQ8WUD1 216 aa12.11□□□□□ -0.47
SMN2-216ENST00000638794 SCRT1Q9BWW7 348 aa12.11□□□□□ -0.47
SMN2-216ENST00000638794 WDR12Q9GZL7 423 aaKnown RBP12.11□□□□□ -0.47
SMN2-216ENST00000638794 ANXA3P12429 323 aa12.1□□□□□ -0.47
SMN2-216ENST00000638794 GPX4P36969 197 aaPredicted RBP12.1□□□□□ -0.47
SMN2-216ENST00000638794 ZNF705AQ6ZN79 300 aaPredicted RBP12.1□□□□□ -0.47
SMN2-216ENST00000638794 OR1S1Q8NH92 325 aa12.1□□□□□ -0.47
SMN2-216ENST00000638794 SLC35E1Q96K37 410 aa12.1□□□□□ -0.47
SMN2-216ENST00000638794 RSL24D1Q9UHA3 163 aaKnown RBP12.1□□□□□ -0.47
SMN2-216ENST00000638794 IGKV3-20P01619 116 aa12.09□□□□□ -0.47
SMN2-216ENST00000638794 ATP5IP56385 69 aaPredicted RBP12.09□□□□□ -0.47
SMN2-216ENST00000638794 FXYD7P58549 80 aa12.09□□□□□ -0.47
SMN2-216ENST00000638794 LYZP61626 148 aa12.09□□□□□ -0.47
SMN2-216ENST00000638794 SRPXP78539 464 aa12.09□□□□□ -0.47
SMN2-216ENST00000638794 GSG1LQ6UXU4 331 aa12.09□□□□□ -0.47
SMN2-216ENST00000638794 LINC00052Q96N35 136 aa12.09□□□□□ -0.47
SMN2-216ENST00000638794 SAV1Q9H4B6 383 aaPredicted RBP12.09□□□□□ -0.47
SMN2-216ENST00000638794 PFDN2Q9UHV9 154 aa12.09□□□□□ -0.47
SMN2-216ENST00000638794 ZNF705FA8MVS1 300 aaPredicted RBP12.08□□□□□ -0.48
SMN2-216ENST00000638794 ZNF705DP0CH99 300 aaPredicted RBP12.08□□□□□ -0.48
SMN2-216ENST00000638794 ZNF705BP0CI00 300 aaPredicted RBP12.08□□□□□ -0.48
SMN2-216ENST00000638794 PSMB3P49720 205 aa12.08□□□□□ -0.48
SMN2-216ENST00000638794 TMBIM6P55061 237 aa12.08□□□□□ -0.48
SMN2-216ENST00000638794 FOXI2Q6ZQN5 318 aa12.08□□□□□ -0.48
SMN2-216ENST00000638794 NEU1Q99519 415 aa12.08□□□□□ -0.48
SMN2-216ENST00000638794 SOSTQ9BQB4 213 aa12.08□□□□□ -0.48
SMN2-216ENST00000638794 BCL7BQ9BQE9 202 aa12.08□□□□□ -0.48
SMN2-216ENST00000638794 SLIRPQ9GZT3 109 aaKnown RBP12.08□□□□□ -0.48
SMN2-216ENST00000638794 IGHV3OR16-12A0A075B7B8 117 aa12.07□□□□□ -0.48
SMN2-216ENST00000638794 FABP12A6NFH5 140 aa12.07□□□□□ -0.48
SMN2-216ENST00000638794 SOCS3O14543 225 aa12.07□□□□□ -0.48
SMN2-216ENST00000638794 PITX3O75364 302 aa12.07□□□□□ -0.48
SMN2-216ENST00000638794 TNFSF8P32971 234 aa12.07□□□□□ -0.48
SMN2-216ENST00000638794 ID1P41134 155 aa12.07□□□□□ -0.48
SMN2-216ENST00000638794 EMP1P54849 157 aa12.07□□□□□ -0.48
SMN2-216ENST00000638794 OR2F1Q13607 317 aa12.07□□□□□ -0.48
SMN2-216ENST00000638794 C1orf194Q5T5A4 169 aa12.07□□□□□ -0.48
SMN2-216ENST00000638794 ZNF709Q8N972 641 aa12.07□□□□□ -0.48
SMN2-216ENST00000638794 COQ8AQ8NI60 647 aa12.07□□□□□ -0.48
SMN2-216ENST00000638794 NDUFAF3Q9BU61 184 aa12.07□□□□□ -0.48
SMN2-216ENST00000638794 DYNC1H1Q14204 4646 aaKnown RBP12.06□□□□□ -0.48
SMN2-216ENST00000638794 PKD1P98161 4303 aa12.06□□□□□ -0.48
SMN2-216ENST00000638794 IGKV1OR2-108A0A075B7D4 117 aa12.06□□□□□ -0.48
SMN2-216ENST00000638794 SNRPGP15A8MWD9 76 aa12.06□□□□□ -0.48
SMN2-216ENST00000638794 FABP1P07148 127 aa12.06□□□□□ -0.48
SMN2-216ENST00000638794 IAPPP10997 89 aa12.06□□□□□ -0.48
SMN2-216ENST00000638794 TMED4Q7Z7H5 227 aa12.06□□□□□ -0.48
SMN2-216ENST00000638794 POM121L12Q8N7R1 296 aa12.06□□□□□ -0.48
SMN2-216ENST00000638794 OR4B1Q8NGF8 309 aa12.06□□□□□ -0.48
SMN2-216ENST00000638794 DUXBA0A1W2PPF3 345 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms