RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 FXYD7P58549 80 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 SLC25A48Q6ZT89 311 aaKnown RBP15.25■□□□□ 0.03
SCARB2-213ENST00000638680 OR9G4Q8NGQ1 327 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 TIMM23O14925 209 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 ZNF883P0CG24 379 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 CKS1BP61024 79 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 COLCA1Q6ZS62 124 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 ZNF664Q8N3J9 261 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 ZNF581Q9P0T4 197 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 LYNX1G3V0Z9 82 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 PSPNO60542 156 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 LYNX1P0DP58 116 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 LYL1P12980 280 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 LAGE3Q14657 143 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 GUSBP1Q15486 140 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 GGNQ86UU5 652 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 DPH3Q96FX2 82 aa15.25■□□□□ 0.03
SCARB2-213ENST00000638680 CLPSP04118 112 aa15.24■□□□□ 0.03
SCARB2-213ENST00000638680 ABHD17AQ96GS6 310 aa15.24■□□□□ 0.03
SCARB2-213ENST00000638680 PMS2P5A8MQ11 134 aa15.24■□□□□ 0.03
SCARB2-213ENST00000638680 RASL11AQ6T310 242 aa15.24■□□□□ 0.03
SCARB2-213ENST00000638680 NUP35Q8NFH5 326 aa15.24■□□□□ 0.03
SCARB2-213ENST00000638680 A0A087X0K7 114 aa15.24■□□□□ 0.03
SCARB2-213ENST00000638680 TRGV2A0A075B6R0 118 aa15.24■□□□□ 0.03
SCARB2-213ENST00000638680 MLNRO43193 412 aa15.24■□□□□ 0.03
SCARB2-213ENST00000638680 CDKN1AP38936 164 aa15.24■□□□□ 0.03
SCARB2-213ENST00000638680 SNRNP200O75643 2136 aaKnown RBP15.23■□□□□ 0.03
SCARB2-213ENST00000638680 IGHV1-46P01743 117 aa15.23■□□□□ 0.03
SCARB2-213ENST00000638680 CD28P10747 220 aa15.23■□□□□ 0.03
SCARB2-213ENST00000638680 SCRT1Q9BWW7 348 aa15.23■□□□□ 0.03
SCARB2-213ENST00000638680 YAE1D1Q9NRH1 226 aa15.23■□□□□ 0.03
SCARB2-213ENST00000638680 SELLP14151 372 aa15.23■□□□□ 0.03
SCARB2-213ENST00000638680 TMEM42Q69YG0 159 aa15.23■□□□□ 0.03
SCARB2-213ENST00000638680 WFDC12Q8WWY7 111 aa15.23■□□□□ 0.03
SCARB2-213ENST00000638680 C7orf69Q9H7B7 122 aa15.23■□□□□ 0.03
SCARB2-213ENST00000638680 CFAP161Q6P656 301 aa15.23■□□□□ 0.03
SCARB2-213ENST00000638680 SMPXQ9UHP9 88 aa15.23■□□□□ 0.03
SCARB2-213ENST00000638680 BCL6BQ8N143 479 aaPredicted RBP15.23■□□□□ 0.03
SCARB2-213ENST00000638680 TMEM167AQ8TBQ9 72 aa15.23■□□□□ 0.03
SCARB2-213ENST00000638680 DOCK3Q8IZD9 2030 aa15.23■□□□□ 0.03
SCARB2-213ENST00000638680 ASXL3Q9C0F0 2248 aa15.23■□□□□ 0.03
SCARB2-213ENST00000638680 LYZL1Q6UWQ5 148 aa15.23■□□□□ 0.03
SCARB2-213ENST00000638680 CD33P20138 364 aa15.22■□□□□ 0.03
SCARB2-213ENST00000638680 CFHR1Q03591 330 aa15.22■□□□□ 0.03
SCARB2-213ENST00000638680 LTBRP36941 435 aa15.22■□□□□ 0.03
SCARB2-213ENST00000638680 MPV17L2Q567V2 206 aa15.22■□□□□ 0.03
SCARB2-213ENST00000638680 FAM168AQ92567 244 aa15.22■□□□□ 0.03
SCARB2-213ENST00000638680 SVILO95425 2214 aa15.22■□□□□ 0.03
SCARB2-213ENST00000638680 PSG1P11464 419 aa15.22■□□□□ 0.03
SCARB2-213ENST00000638680 SLC25A39Q9BZJ4 359 aaPredicted RBP15.22■□□□□ 0.03
SCARB2-213ENST00000638680 NPFFR1Q9GZQ6 430 aa15.22■□□□□ 0.03
SCARB2-213ENST00000638680 NTF4P34130 210 aa15.22■□□□□ 0.03
SCARB2-213ENST00000638680 SMAD7O15105 426 aaKnown RBP15.21■□□□□ 0.03
SCARB2-213ENST00000638680 TCRAP04437 139 aa15.21■□□□□ 0.03
SCARB2-213ENST00000638680 RPUSD1Q9UJJ7 312 aaKnown RBP15.21■□□□□ 0.03
SCARB2-213ENST00000638680 MYOD1P15172 320 aa15.21■□□□□ 0.03
SCARB2-213ENST00000638680 PLNP26678 52 aa15.21■□□□□ 0.03
SCARB2-213ENST00000638680 CD177Q8N6Q3 437 aa15.21■□□□□ 0.03
SCARB2-213ENST00000638680 SLC25A15Q9Y619 301 aa15.21■□□□□ 0.03
SCARB2-213ENST00000638680 MBNL3Q9NUK0 354 aaKnown RBP15.21■□□□□ 0.03
SCARB2-213ENST00000638680 METRNQ9UJH8 293 aa15.21■□□□□ 0.03
SCARB2-213ENST00000638680 RPL15P61313 204 aaKnown RBP15.21■□□□□ 0.02
SCARB2-213ENST00000638680 SRRM5B3KS81 715 aa15.2■□□□□ 0.02
SCARB2-213ENST00000638680 FAM90A2PQ658T7 463 aa15.2■□□□□ 0.02
SCARB2-213ENST00000638680 SIGLEC15Q6ZMC9 328 aa15.2■□□□□ 0.02
SCARB2-213ENST00000638680 LY96Q9Y6Y9 160 aa15.2■□□□□ 0.02
SCARB2-213ENST00000638680 A0A0U1RRA0 63 aa15.2■□□□□ 0.02
SCARB2-213ENST00000638680 LINC00473A8K010 186 aa15.2■□□□□ 0.02
SCARB2-213ENST00000638680 ERG28Q9UKR5 140 aa15.2■□□□□ 0.02
SCARB2-213ENST00000638680 A0A1W2PRX2 142 aa15.19■□□□□ 0.02
SCARB2-213ENST00000638680 SRD5A1P18405 259 aa15.19■□□□□ 0.02
SCARB2-213ENST00000638680 MST1LQ2TV78 715 aa15.19■□□□□ 0.02
SCARB2-213ENST00000638680 A0A0G2JRQ6 117 aa15.19■□□□□ 0.02
SCARB2-213ENST00000638680 PEMTQ9UBM1 199 aa15.19■□□□□ 0.02
SCARB2-213ENST00000638680 SYS1-DBNDD2H3BUS1 97 aa15.19■□□□□ 0.02
SCARB2-213ENST00000638680 LSM4Q9Y4Z0 139 aaKnown RBP15.18■□□□□ 0.02
SCARB2-213ENST00000638680 C9JQL5 133 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 LILRA1O75019 489 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 DEFB104AQ8WTQ1 72 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 FAM186AA6NE01 2351 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 LINC00205P59089 165 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 UBE2V1Q13404 147 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 TMEM200BQ69YZ2 307 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 IGHV2-26A0A0B4J1V2 119 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 EREGO14944 169 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 TDGF1P3P51864 188 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 PAX8Q06710 450 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 TPTE2P1Q5T6R2 138 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 RPRMLQ8N4K4 120 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 ZNF138P52744 262 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 NPC2P61916 151 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 CSRP2Q16527 193 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 KIF26BQ2KJY2 2108 aa15.18■□□□□ 0.02
SCARB2-213ENST00000638680 CRIPAKQ8N1N5 446 aa15.17■□□□□ 0.02
SCARB2-213ENST00000638680 MRPL27Q9P0M9 148 aaKnown RBP15.17■□□□□ 0.02
SCARB2-213ENST00000638680 M0R2P5 195 aa15.17■□□□□ 0.02
SCARB2-213ENST00000638680 OVOL1O14753 267 aa15.17■□□□□ 0.02
SCARB2-213ENST00000638680 MALP21145 153 aa15.17■□□□□ 0.02
SCARB2-213ENST00000638680 TNFRSF14Q92956 283 aa15.17■□□□□ 0.02
SCARB2-213ENST00000638680 SH2D1AO60880 128 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms